| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691995
Identifier: 213691995
GI number: 213691995
Start: 1304055
End: 1304444
Strand: Reverse
Name: 213691995
Synonym: Blon_1113
Alternate gene names: NA
Gene position: 1304444-1304055 (Counterclockwise)
Preceding gene: 213691996
Following gene: 213691994
Centisome position: 46.05
GC content: 63.59
Gene sequence:
>390_bases GTGACAATCGACGCTTCGGAGCTGACCGCTTTCGGCCGCAGGGTCGCCGCGGCCCACGCCATGGCTTCGGTCAAGGTTGC GCAGGCGGTGAAGAAGGGCGCGCAGAGCGTCAAGGAAGTCATCATCTCCGACCTGCAGACCTCATGGAACTACGCGATCA GCTGTATCGGCATCGGCTACGAGATGGGTAGCACCGGCACCACCGTGTACGCGGACGTGAGCCCGCGCGAAGGCGGGGCC AGCGACTTGGACAACATCGCGTTCTTCGGCACCGCGAAAGGCGGCGGAACCCATGACTTCTACGAAGCTGCGGAGACGGA GCTGCCCACGCTCGCCGAATACGTGGCCGATGCCGCCGACGACATGCTGATAGGAGCCATCGGATTATGA
Upstream 100 bases:
>100_bases AAGGGCAGGAGGCTCCGGTTGCTGAACATGCAGTCCGAGAAGTCGCATGCGACCGCATGCCGGTGGAACGTGAAGGAGGT GGGCAACAGCAATGAGTGAC
Downstream 100 bases:
>100_bases GCGTCATGGACTTGACCAATGCGGTGCTCGACCTGCTGCCCTCCATGCCGTCCGGCGTGAGGGTCTACCGGCAGGAGGAG CCGTTGGAGTCGGAGATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MTIDASELTAFGRRVAAAHAMASVKVAQAVKKGAQSVKEVIISDLQTSWNYAISCIGIGYEMGSTGTTVYADVSPREGGA SDLDNIAFFGTAKGGGTHDFYEAAETELPTLAEYVADAADDMLIGAIGL
Sequences:
>Translated_129_residues MTIDASELTAFGRRVAAAHAMASVKVAQAVKKGAQSVKEVIISDLQTSWNYAISCIGIGYEMGSTGTTVYADVSPREGGA SDLDNIAFFGTAKGGGTHDFYEAAETELPTLAEYVADAADDMLIGAIGL >Mature_128_residues TIDASELTAFGRRVAAAHAMASVKVAQAVKKGAQSVKEVIISDLQTSWNYAISCIGIGYEMGSTGTTVYADVSPREGGAS DLDNIAFFGTAKGGGTHDFYEAAETELPTLAEYVADAADDMLIGAIGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13356; Mature: 13225
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDASELTAFGRRVAAAHAMASVKVAQAVKKGAQSVKEVIISDLQTSWNYAISCIGIGY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECE EMGSTGTTVYADVSPREGGASDLDNIAFFGTAKGGGTHDFYEAAETELPTLAEYVADAAD EECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHC DMLIGAIGL CHHHHCCCC >Mature Secondary Structure TIDASELTAFGRRVAAAHAMASVKVAQAVKKGAQSVKEVIISDLQTSWNYAISCIGIGY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECE EMGSTGTTVYADVSPREGGASDLDNIAFFGTAKGGGTHDFYEAAETELPTLAEYVADAAD EECCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHC DMLIGAIGL CHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA