| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is fabG [C]
Identifier: 213691954
GI number: 213691954
Start: 1253420
End: 1254127
Strand: Direct
Name: fabG [C]
Synonym: Blon_1070
Alternate gene names: 213691954
Gene position: 1253420-1254127 (Clockwise)
Preceding gene: 213691953
Following gene: 213691955
Centisome position: 44.25
GC content: 61.44
Gene sequence:
>708_bases ATGCCAACCACAACAGGTAAGAAAATCGCCATCGTCACCGGCAGCGCGCTGGGTTTGGGCTACGAGCTCGCCAGCCAACT CATCGCCAAGGGCTGGCTGGTGGCCGGCATCGACTTCAACGCCGAACGTCAGGCCGAGCTGAGCACGCAGTGGCCCGCCG AATCCTACCGCGCCTTCGTAGGCGACATCACTGACGAAGCGTTCGTCAAGGAATCCGTGGCGAGCATCGCTGCGCTTGGT CACATCGACCTGCTCATCAACAACGCCGGCCAGCCCTCGTTCAAGGTGCCCACCGCCTATGAGGCCGCCGATGTCGACAC ATGCCTCAAAGGTCTCAAAGGCATGATCCTGTGGACGGTGGAAACCCTCAAGACCTGTGGCGAGCGTGACGTGAAAATCG CCCAGATCATGAGCACCGCCGCCACGCGGGGCAACGCGAACGAAAGCGTGTACTGCGCCACCAAGTGGGGCGAGAAGGGC TACACCAAGAGCCTGCAGGCCGCATACAAGGGCACCAGCGTCAAGGTGGTCGCCGTCTATCCGGGCGGCATCGACACCGC CTTCTACCGTGATAGCCATGACTACGTCTCCGAAGCCAAGCAGCACACCTTCATGCAGCCCGGTCCGCTGGCCGAGGTCA TCCTCTTCAACCTGATCAACGAGGCCAACCTCACCGTCACCGACATCGAGATCAACCGCAACAGCTGA
Upstream 100 bases:
>100_bases TCAGCAAAGAGCGGGTTAACCCTAGGTTCCCCTCGCTGAGGGGAGCTGGCCGCCGTAGGCGGCCTGAGGGGAGTCTCGCA AGCATGCAAAGGAAACAACC
Downstream 100 bases:
>100_bases GCTGGCAGGTTATACACATATCCACCGATTCGGCCGAGCTGGTTGCGCGCAGAAGTTGGTTATGCCATCGTGAGTTGTAT CCGTGAATAACGCGGTTCAC
Product: short-chain dehydrogenase/reductase SDR
Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MPTTTGKKIAIVTGSALGLGYELASQLIAKGWLVAGIDFNAERQAELSTQWPAESYRAFVGDITDEAFVKESVASIAALG HIDLLINNAGQPSFKVPTAYEAADVDTCLKGLKGMILWTVETLKTCGERDVKIAQIMSTAATRGNANESVYCATKWGEKG YTKSLQAAYKGTSVKVVAVYPGGIDTAFYRDSHDYVSEAKQHTFMQPGPLAEVILFNLINEANLTVTDIEINRNS
Sequences:
>Translated_235_residues MPTTTGKKIAIVTGSALGLGYELASQLIAKGWLVAGIDFNAERQAELSTQWPAESYRAFVGDITDEAFVKESVASIAALG HIDLLINNAGQPSFKVPTAYEAADVDTCLKGLKGMILWTVETLKTCGERDVKIAQIMSTAATRGNANESVYCATKWGEKG YTKSLQAAYKGTSVKVVAVYPGGIDTAFYRDSHDYVSEAKQHTFMQPGPLAEVILFNLINEANLTVTDIEINRNS >Mature_234_residues PTTTGKKIAIVTGSALGLGYELASQLIAKGWLVAGIDFNAERQAELSTQWPAESYRAFVGDITDEAFVKESVASIAALGH IDLLINNAGQPSFKVPTAYEAADVDTCLKGLKGMILWTVETLKTCGERDVKIAQIMSTAATRGNANESVYCATKWGEKGY TKSLQAAYKGTSVKVVAVYPGGIDTAFYRDSHDYVSEAKQHTFMQPGPLAEVILFNLINEANLTVTDIEINRNS
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI31542939, Length=188, Percent_Identity=29.7872340425532, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1787335, Length=192, Percent_Identity=29.6875, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787820, Length=181, Percent_Identity=32.0441988950276, Blast_Score=62, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322067, Length=185, Percent_Identity=32.972972972973, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641232, Length=242, Percent_Identity=28.099173553719, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24641388, Length=195, Percent_Identity=29.7435897435897, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.1.1.100 [C]
Molecular weight: Translated: 25335; Mature: 25204
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTTGKKIAIVTGSALGLGYELASQLIAKGWLVAGIDFNAERQAELSTQWPAESYRAFV CCCCCCCEEEEEECCCHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH GDITDEAFVKESVASIAALGHIDLLINNAGQPSFKVPTAYEAADVDTCLKGLKGMILWTV CCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEH ETLKTCGERDVKIAQIMSTAATRGNANESVYCATKWGEKGYTKSLQAAYKGTSVKVVAVY HHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEE PGGIDTAFYRDSHDYVSEAKQHTFMQPGPLAEVILFNLINEANLTVTDIEINRNS CCCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCC >Mature Secondary Structure PTTTGKKIAIVTGSALGLGYELASQLIAKGWLVAGIDFNAERQAELSTQWPAESYRAFV CCCCCCEEEEEECCCHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH GDITDEAFVKESVASIAALGHIDLLINNAGQPSFKVPTAYEAADVDTCLKGLKGMILWTV CCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEH ETLKTCGERDVKIAQIMSTAATRGNANESVYCATKWGEKGYTKSLQAAYKGTSVKVVAVY HHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEE PGGIDTAFYRDSHDYVSEAKQHTFMQPGPLAEVILFNLINEANLTVTDIEINRNS CCCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]
Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12950922 [H]