Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213691893

Identifier: 213691893

GI number: 213691893

Start: 1189933

End: 1190904

Strand: Reverse

Name: 213691893

Synonym: Blon_1005

Alternate gene names: NA

Gene position: 1190904-1189933 (Counterclockwise)

Preceding gene: 213691894

Following gene: 213691884

Centisome position: 42.04

GC content: 65.74

Gene sequence:

>972_bases
GTGAAGAAGTTTTTTGAAGGAATCTCCCTCTCATCCATCGTGGCGGGCACCCTTGCCGCCGTCACCTCGTTCCTGCTCGC
ATCGAAGATCGGCATCGGCGGTTCGGTGATCGGAGCGGCGGCCAGTTACGTCGTCTCCGCCGTGGCCACCAAGATCTACC
AGAACGTGCTCACCGCCTCCGGCGAAAAACTCCAATCGGCCTCGTCCTCCGGCAACGGGATCACGAAGGACGCCGAGAAC
GGCGATGCCGATGGCGGTACCCCCCGAACGGCCGGCAGCCGGACCGACGTTCGGGACGAGCCCGATACGGCGACGGGCGT
GACCGCCGATGATGCTTCCTCCACACGCAGACCGCGTGAAATCGTGTTCAGCCGGGCGAACGGCAGGACGTACTCGGTCG
ATGAGCTGCGCAAGTCCCGCTTCCGCGCTTCGAAGCACACCGCCATGATCGTCACCTTGGTGTCCGGCCTGCTCGCCGTG
GCGGTGACGGCCGGCGTCGTGATGCTGGCCACGCAGGGACGCGGCACGGACAATCTCGTATCCCCCACCACGACCACGCC
CGCGCGCAACGACACCGGCACGCGAACGGGCACACCCGATCAGAACAACACTCTGCCCCAGACGGGCACCGGCGATGATT
CGAAGGGAACCAGCAAGGATTCGAAAACCGACGCCCCCTCCACCGACCTCGACGCCAACGGCACCTCGGGTTCGACCGGC
GCCGGCGCCTCGGATTCGAAAACCGACGGCACCGCCAACGGTTCGAACGGCACCGGCACCTCAAAGAATCCGACCACCGA
GGACCTGACCAGCCAAGGCACCGGCGGCAGCCAGACCGGTTCGAACGGCACCGGCACCGGCTCGACGCAAAAAGATCCAT
CGGGATCGACTTCAACCAGTACCGACACCAACGGCACCAGCGGATCGCCGGCCACCGGCCAAAGCACCGGAGCCGGCAGC
ACGGGCAAATAG

Upstream 100 bases:

>100_bases
ACCTGTACGAAGGCCGATTTTGAAGGTCTCGTGTAGGCCTCGCCCCGCTTCCATCGAGTCTCAGGCAACCTGTCAGCCCG
ACACCCTACGGTCGTGCATT

Downstream 100 bases:

>100_bases
CGCATGCGGAAAGCCCAACGGCCGCGACGTCAGTCGACGGCTAAGTTGAATCCGGGACCACCATGCCGAATATCGCTTGG
AGATATGATAAGGGAACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKKFFEGISLSSIVAGTLAAVTSFLLASKIGIGGSVIGAAASYVVSAVATKIYQNVLTASGEKLQSASSSGNGITKDAEN
GDADGGTPRTAGSRTDVRDEPDTATGVTADDASSTRRPREIVFSRANGRTYSVDELRKSRFRASKHTAMIVTLVSGLLAV
AVTAGVVMLATQGRGTDNLVSPTTTTPARNDTGTRTGTPDQNNTLPQTGTGDDSKGTSKDSKTDAPSTDLDANGTSGSTG
AGASDSKTDGTANGSNGTGTSKNPTTEDLTSQGTGGSQTGSNGTGTGSTQKDPSGSTSTSTDTNGTSGSPATGQSTGAGS
TGK

Sequences:

>Translated_323_residues
MKKFFEGISLSSIVAGTLAAVTSFLLASKIGIGGSVIGAAASYVVSAVATKIYQNVLTASGEKLQSASSSGNGITKDAEN
GDADGGTPRTAGSRTDVRDEPDTATGVTADDASSTRRPREIVFSRANGRTYSVDELRKSRFRASKHTAMIVTLVSGLLAV
AVTAGVVMLATQGRGTDNLVSPTTTTPARNDTGTRTGTPDQNNTLPQTGTGDDSKGTSKDSKTDAPSTDLDANGTSGSTG
AGASDSKTDGTANGSNGTGTSKNPTTEDLTSQGTGGSQTGSNGTGTGSTQKDPSGSTSTSTDTNGTSGSPATGQSTGAGS
TGK
>Mature_323_residues
MKKFFEGISLSSIVAGTLAAVTSFLLASKIGIGGSVIGAAASYVVSAVATKIYQNVLTASGEKLQSASSSGNGITKDAEN
GDADGGTPRTAGSRTDVRDEPDTATGVTADDASSTRRPREIVFSRANGRTYSVDELRKSRFRASKHTAMIVTLVSGLLAV
AVTAGVVMLATQGRGTDNLVSPTTTTPARNDTGTRTGTPDQNNTLPQTGTGDDSKGTSKDSKTDAPSTDLDANGTSGSTG
AGASDSKTDGTANGSNGTGTSKNPTTEDLTSQGTGGSQTGSNGTGTGSTQKDPSGSTSTSTDTNGTSGSPATGQSTGAGS
TGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31944; Mature: 31944

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFFEGISLSSIVAGTLAAVTSFLLASKIGIGGSVIGAAASYVVSAVATKIYQNVLTAS
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEKLQSASSSGNGITKDAENGDADGGTPRTAGSRTDVRDEPDTATGVTADDASSTRRPRE
CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHH
IVFSRANGRTYSVDELRKSRFRASKHTAMIVTLVSGLLAVAVTAGVVMLATQGRGTDNLV
HEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC
SPTTTTPARNDTGTRTGTPDQNNTLPQTGTGDDSKGTSKDSKTDAPSTDLDANGTSGSTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGASDSKTDGTANGSNGTGTSKNPTTEDLTSQGTGGSQTGSNGTGTGSTQKDPSGSTSTS
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TDTNGTSGSPATGQSTGAGSTGK
CCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKFFEGISLSSIVAGTLAAVTSFLLASKIGIGGSVIGAAASYVVSAVATKIYQNVLTAS
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEKLQSASSSGNGITKDAENGDADGGTPRTAGSRTDVRDEPDTATGVTADDASSTRRPRE
CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHH
IVFSRANGRTYSVDELRKSRFRASKHTAMIVTLVSGLLAVAVTAGVVMLATQGRGTDNLV
HEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC
SPTTTTPARNDTGTRTGTPDQNNTLPQTGTGDDSKGTSKDSKTDAPSTDLDANGTSGSTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AGASDSKTDGTANGSNGTGTSKNPTTEDLTSQGTGGSQTGSNGTGTGSTQKDPSGSTSTS
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TDTNGTSGSPATGQSTGAGSTGK
CCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA