| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691893
Identifier: 213691893
GI number: 213691893
Start: 1189933
End: 1190904
Strand: Reverse
Name: 213691893
Synonym: Blon_1005
Alternate gene names: NA
Gene position: 1190904-1189933 (Counterclockwise)
Preceding gene: 213691894
Following gene: 213691884
Centisome position: 42.04
GC content: 65.74
Gene sequence:
>972_bases GTGAAGAAGTTTTTTGAAGGAATCTCCCTCTCATCCATCGTGGCGGGCACCCTTGCCGCCGTCACCTCGTTCCTGCTCGC ATCGAAGATCGGCATCGGCGGTTCGGTGATCGGAGCGGCGGCCAGTTACGTCGTCTCCGCCGTGGCCACCAAGATCTACC AGAACGTGCTCACCGCCTCCGGCGAAAAACTCCAATCGGCCTCGTCCTCCGGCAACGGGATCACGAAGGACGCCGAGAAC GGCGATGCCGATGGCGGTACCCCCCGAACGGCCGGCAGCCGGACCGACGTTCGGGACGAGCCCGATACGGCGACGGGCGT GACCGCCGATGATGCTTCCTCCACACGCAGACCGCGTGAAATCGTGTTCAGCCGGGCGAACGGCAGGACGTACTCGGTCG ATGAGCTGCGCAAGTCCCGCTTCCGCGCTTCGAAGCACACCGCCATGATCGTCACCTTGGTGTCCGGCCTGCTCGCCGTG GCGGTGACGGCCGGCGTCGTGATGCTGGCCACGCAGGGACGCGGCACGGACAATCTCGTATCCCCCACCACGACCACGCC CGCGCGCAACGACACCGGCACGCGAACGGGCACACCCGATCAGAACAACACTCTGCCCCAGACGGGCACCGGCGATGATT CGAAGGGAACCAGCAAGGATTCGAAAACCGACGCCCCCTCCACCGACCTCGACGCCAACGGCACCTCGGGTTCGACCGGC GCCGGCGCCTCGGATTCGAAAACCGACGGCACCGCCAACGGTTCGAACGGCACCGGCACCTCAAAGAATCCGACCACCGA GGACCTGACCAGCCAAGGCACCGGCGGCAGCCAGACCGGTTCGAACGGCACCGGCACCGGCTCGACGCAAAAAGATCCAT CGGGATCGACTTCAACCAGTACCGACACCAACGGCACCAGCGGATCGCCGGCCACCGGCCAAAGCACCGGAGCCGGCAGC ACGGGCAAATAG
Upstream 100 bases:
>100_bases ACCTGTACGAAGGCCGATTTTGAAGGTCTCGTGTAGGCCTCGCCCCGCTTCCATCGAGTCTCAGGCAACCTGTCAGCCCG ACACCCTACGGTCGTGCATT
Downstream 100 bases:
>100_bases CGCATGCGGAAAGCCCAACGGCCGCGACGTCAGTCGACGGCTAAGTTGAATCCGGGACCACCATGCCGAATATCGCTTGG AGATATGATAAGGGAACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MKKFFEGISLSSIVAGTLAAVTSFLLASKIGIGGSVIGAAASYVVSAVATKIYQNVLTASGEKLQSASSSGNGITKDAEN GDADGGTPRTAGSRTDVRDEPDTATGVTADDASSTRRPREIVFSRANGRTYSVDELRKSRFRASKHTAMIVTLVSGLLAV AVTAGVVMLATQGRGTDNLVSPTTTTPARNDTGTRTGTPDQNNTLPQTGTGDDSKGTSKDSKTDAPSTDLDANGTSGSTG AGASDSKTDGTANGSNGTGTSKNPTTEDLTSQGTGGSQTGSNGTGTGSTQKDPSGSTSTSTDTNGTSGSPATGQSTGAGS TGK
Sequences:
>Translated_323_residues MKKFFEGISLSSIVAGTLAAVTSFLLASKIGIGGSVIGAAASYVVSAVATKIYQNVLTASGEKLQSASSSGNGITKDAEN GDADGGTPRTAGSRTDVRDEPDTATGVTADDASSTRRPREIVFSRANGRTYSVDELRKSRFRASKHTAMIVTLVSGLLAV AVTAGVVMLATQGRGTDNLVSPTTTTPARNDTGTRTGTPDQNNTLPQTGTGDDSKGTSKDSKTDAPSTDLDANGTSGSTG AGASDSKTDGTANGSNGTGTSKNPTTEDLTSQGTGGSQTGSNGTGTGSTQKDPSGSTSTSTDTNGTSGSPATGQSTGAGS TGK >Mature_323_residues MKKFFEGISLSSIVAGTLAAVTSFLLASKIGIGGSVIGAAASYVVSAVATKIYQNVLTASGEKLQSASSSGNGITKDAEN GDADGGTPRTAGSRTDVRDEPDTATGVTADDASSTRRPREIVFSRANGRTYSVDELRKSRFRASKHTAMIVTLVSGLLAV AVTAGVVMLATQGRGTDNLVSPTTTTPARNDTGTRTGTPDQNNTLPQTGTGDDSKGTSKDSKTDAPSTDLDANGTSGSTG AGASDSKTDGTANGSNGTGTSKNPTTEDLTSQGTGGSQTGSNGTGTGSTQKDPSGSTSTSTDTNGTSGSPATGQSTGAGS TGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31944; Mature: 31944
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFFEGISLSSIVAGTLAAVTSFLLASKIGIGGSVIGAAASYVVSAVATKIYQNVLTAS CCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GEKLQSASSSGNGITKDAENGDADGGTPRTAGSRTDVRDEPDTATGVTADDASSTRRPRE CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHH IVFSRANGRTYSVDELRKSRFRASKHTAMIVTLVSGLLAVAVTAGVVMLATQGRGTDNLV HEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC SPTTTTPARNDTGTRTGTPDQNNTLPQTGTGDDSKGTSKDSKTDAPSTDLDANGTSGSTG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGASDSKTDGTANGSNGTGTSKNPTTEDLTSQGTGGSQTGSNGTGTGSTQKDPSGSTSTS CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDTNGTSGSPATGQSTGAGSTGK CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKFFEGISLSSIVAGTLAAVTSFLLASKIGIGGSVIGAAASYVVSAVATKIYQNVLTAS CCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GEKLQSASSSGNGITKDAENGDADGGTPRTAGSRTDVRDEPDTATGVTADDASSTRRPRE CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHH IVFSRANGRTYSVDELRKSRFRASKHTAMIVTLVSGLLAVAVTAGVVMLATQGRGTDNLV HEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCC SPTTTTPARNDTGTRTGTPDQNNTLPQTGTGDDSKGTSKDSKTDAPSTDLDANGTSGSTG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGASDSKTDGTANGSNGTGTSKNPTTEDLTSQGTGGSQTGSNGTGTGSTQKDPSGSTSTS CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TDTNGTSGSPATGQSTGAGSTGK CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA