Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691885

Identifier: 213691885

GI number: 213691885

Start: 1182807

End: 1183184

Strand: Direct

Name: 213691885

Synonym: Blon_0997

Alternate gene names: NA

Gene position: 1182807-1183184 (Clockwise)

Preceding gene: 213691881

Following gene: 213691886

Centisome position: 41.75

GC content: 56.08

Gene sequence:

>378_bases
ATGCTGCCATACCAAGTGATGGTGAAGTTGTCCGAGTTCAATGATTTGCCTTCGTCGTGCAGTTATGTCTTGATTTCTGT
GACGTTCTCAGAGTCGATAACATTGGTATCGGTGCCCCAGGAGACTTTGACCGTGATGTTGCTTGGGCCGATGATCATGG
TCGGCAAACTGCCGCCCGGATGGTGGTTGTGCACATCCATCGACAATGCGTTCGGGCTTGGTGCCGTGACCAGAGTGGAT
TACGGGGCATGGACGTCGTCGATTGGTCTGGTGGCGTTGTTCGACGTTGCATTCATCTGCCTTGGTCTGGCTTTGGGGCG
CATTCGCCGTACGCGCCCGTCCCCATCTTCTCACGCCGCCACGCAGTCGGCCGGATGA

Upstream 100 bases:

>100_bases
TGTGGCCTGTCCGGTTGTGGGGATCTGAGAGAGGTGGTGTTCGGGGTGGCTCTTTCCAGTCGAACGTGTAGCTTTGGCCC
GACTGTTCCTCGCCGTCGAG

Downstream 100 bases:

>100_bases
TCACGAACGTTTCGTTCCATTGACCGGTTCTCGATGGAACGAAACGTTCGTGATGACCCGGTGGACGGGCCCTTCCCTGA
TCCGTGGCCACGGTTTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MLPYQVMVKLSEFNDLPSSCSYVLISVTFSESITLVSVPQETLTVMLLGPMIMVGKLPPGWWLCTSIDNAFGLGAVTRVD
YGAWTSSIGLVALFDVAFICLGLALGRIRRTRPSPSSHAATQSAG

Sequences:

>Translated_125_residues
MLPYQVMVKLSEFNDLPSSCSYVLISVTFSESITLVSVPQETLTVMLLGPMIMVGKLPPGWWLCTSIDNAFGLGAVTRVD
YGAWTSSIGLVALFDVAFICLGLALGRIRRTRPSPSSHAATQSAG
>Mature_125_residues
MLPYQVMVKLSEFNDLPSSCSYVLISVTFSESITLVSVPQETLTVMLLGPMIMVGKLPPGWWLCTSIDNAFGLGAVTRVD
YGAWTSSIGLVALFDVAFICLGLALGRIRRTRPSPSSHAATQSAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13398; Mature: 13398

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPYQVMVKLSEFNDLPSSCSYVLISVTFSESITLVSVPQETLTVMLLGPMIMVGKLPPG
CCCHHHEEEEHHCCCCCCCCCEEEEEEEECCCEEEEECCHHHHHHHHHHHHHEECCCCCC
WWLCTSIDNAFGLGAVTRVDYGAWTSSIGLVALFDVAFICLGLALGRIRRTRPSPSSHAA
EEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TQSAG
CCCCC
>Mature Secondary Structure
MLPYQVMVKLSEFNDLPSSCSYVLISVTFSESITLVSVPQETLTVMLLGPMIMVGKLPPG
CCCHHHEEEEHHCCCCCCCCCEEEEEEEECCCEEEEECCHHHHHHHHHHHHHEECCCCCC
WWLCTSIDNAFGLGAVTRVDYGAWTSSIGLVALFDVAFICLGLALGRIRRTRPSPSSHAA
EEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TQSAG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA