| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691879
Identifier: 213691879
GI number: 213691879
Start: 1176456
End: 1176893
Strand: Direct
Name: 213691879
Synonym: Blon_0991
Alternate gene names: NA
Gene position: 1176456-1176893 (Clockwise)
Preceding gene: 213691878
Following gene: 213691880
Centisome position: 41.53
GC content: 35.16
Gene sequence:
>438_bases ATGTGTATGGAATGTTATGTTGACGAGAATAGAATAACACCACTTTTAAATCCATTAGATTGTTTAGAAAATCATACACA ATACATTTGTGGGACTTGCGGGAGGTGTATCTGCATTGAGCATGATCCCAAACGTGGATTACAACGGTGGAATTTCCCTT TTAGATCGTTAGAGATAGCGAAATTATATTTGCGTACTGCTGATTATAGTACTAAAAAGTCATGTGGTATTTACGAACTG AAAAGTGAGAATGGCAGACTTTCATACAAAATCTTTGCGGACGGTGAGGACTTGCTGTTATATCTAAAGAAGAACAAAGG AAAAACTTGCAAAGATATGAAACCGGTTTTCATGATTGAAGAATACAGAGAATATGCAAATACGCAAATAAGAAAATTGA CCTCTGATGAAATACAGAGATATATGTCAGAGCGATAA
Upstream 100 bases:
>100_bases TTGGTGGGTAAATTTTTTATTGTAGCAGATATATGGAACTGTTATAATATGGATATGAAGGAAGCAACGCATTTGAAGTT GCAGAAGGAGTGAATCTGAA
Downstream 100 bases:
>100_bases CTTCCAGTTTTGCAATTTCATATCTATGCATACATAGCAGTTAGTCTTAGGATTGACTGCTTTTTTTGTACTCAGAAAGG AGTGATTGATTTATGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MCMECYVDENRITPLLNPLDCLENHTQYICGTCGRCICIEHDPKRGLQRWNFPFRSLEIAKLYLRTADYSTKKSCGIYEL KSENGRLSYKIFADGEDLLLYLKKNKGKTCKDMKPVFMIEEYREYANTQIRKLTSDEIQRYMSER
Sequences:
>Translated_145_residues MCMECYVDENRITPLLNPLDCLENHTQYICGTCGRCICIEHDPKRGLQRWNFPFRSLEIAKLYLRTADYSTKKSCGIYEL KSENGRLSYKIFADGEDLLLYLKKNKGKTCKDMKPVFMIEEYREYANTQIRKLTSDEIQRYMSER >Mature_145_residues MCMECYVDENRITPLLNPLDCLENHTQYICGTCGRCICIEHDPKRGLQRWNFPFRSLEIAKLYLRTADYSTKKSCGIYEL KSENGRLSYKIFADGEDLLLYLKKNKGKTCKDMKPVFMIEEYREYANTQIRKLTSDEIQRYMSER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17193; Mature: 17193
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCMECYVDENRITPLLNPLDCLENHTQYICGTCGRCICIEHDPKRGLQRWNFPFRSLEIA CCEEEEECCCCCCCCCCHHHHHHHHHHEEECCCCCEEEEECCHHHHHHHCCCCCHHHHHH KLYLRTADYSTKKSCGIYELKSENGRLSYKIFADGEDLLLYLKKNKGKTCKDMKPVFMIE HHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCHHHHH EYREYANTQIRKLTSDEIQRYMSER HHHHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MCMECYVDENRITPLLNPLDCLENHTQYICGTCGRCICIEHDPKRGLQRWNFPFRSLEIA CCEEEEECCCCCCCCCCHHHHHHHHHHEEECCCCCEEEEECCHHHHHHHCCCCCHHHHHH KLYLRTADYSTKKSCGIYELKSENGRLSYKIFADGEDLLLYLKKNKGKTCKDMKPVFMIE HHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCHHHHH EYREYANTQIRKLTSDEIQRYMSER HHHHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA