Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691858

Identifier: 213691858

GI number: 213691858

Start: 1149334

End: 1150623

Strand: Direct

Name: 213691858

Synonym: Blon_0967

Alternate gene names: NA

Gene position: 1149334-1150623 (Clockwise)

Preceding gene: 213691855

Following gene: 213691860

Centisome position: 40.57

GC content: 63.18

Gene sequence:

>1290_bases
GTGCTACTTGAATGGGCAACTATGAGTGTTGAGACGCCGGATATGGACGAGTTGCTGCGGCTGGTGCCCACTGTGGGCTA
TGGGGATGACGTCCCGGCCGATCGGCGTGGGGGAGCGCTGCACCTGTCCGCCGTGCTGCCCGCCTTGTCCGCCGCCATCG
GACATCCGACTCCCACCAAGGTCCACGCCGATCCCAAGGCCTGCCAGCGCGCGTTGGGACTGCCCGACGCCGAATCGGCC
ATCGTGGTGCTCGTGGACGGCCTCGGCTTCTGGAACCTCGCCATGCGCCTCGGCCACGCGCCCTATCTGCGTTCGCTGAT
GAACGAAAGCGCCAATCAGCGTCCCGTCGCCACCTGCGCTCCAAGCACCACTGTGGCGGCCATGGCCGCATTCGGTACCG
GAACCTGCCCGGGACTGACCGCAATGGCGGGCTATACGCAGCTCGAACCCGCCAGCCATAAGCTCATCCAACTCATCCAG
TTCAAAGACGCGCTGGCAACCAGACCAGCCAATCCGCACATTCCTGTGCCGCCCATGGTCGATCCGTTCGACCTGCAGCG
CGAGGAGACGGTGTTCGAGAAACTTGCGGCTCAAGAGGTGCGTGTCACGAGCTCGGGGTTGCCCAAGTTCTCCAGATCAC
CATTGACCGAAGCCGCATTGCGAGGCACCGACTATCAAGGCAACGTCACCCCACGTGATCGTGTGCTGGCCGCCTCACGC
GCCTCACGCACCCCCGGCCTGACCTACCTGTACATCCGTGACGCCGACAAAGTCGGCCACAATTACGGGTGGGATTCCGA
ACACTGGGTGGCCGCATTCGAACATATCGACGCCCAGCTCGCGCTCCTGAAACGCAGCGCACCCAAAGGCACGCTGATCG
TCATCGTGGCCGACCACGGCATGGTGCAAACCGACATGGACCAGCGGATTGACATCGCCGTTGAACCGCAGCTCACCCGA
GGCGTGTCACTGGTCGGGGGAGAGCCGCGCTCGCTGATGCTGTATGCCGAGCCGGATGAACGACCTGAGGATATAGCTTG
CCGGTGGCGCGATTACCTGCAAGACCGAGCCTTGGTGCGAACCAGGGATGAGGCCATCGCGGACGGATTGTTTGGACCGG
TCTGCGAGCGAGTCCGGCCGATGCTTGGCGATGTGGTCGTGCAGGCAGCGGGAGCCGTGACCCTCGTCGATTCGCGTACG
CAAGGAGACAAAGCCACTCACCTGCCGAGCGTGCATGGCTCCCAAACGGCATTGGAAATGGATATTCCCTGCCTGATCGA
TATGGCCTGA

Upstream 100 bases:

>100_bases
ATTCCAGTGTTTCAGTCGATGTGCGTTTGTTTGATTATGTGCGTTGGAGCGCACGGTTGTTATCGAGAACCGTTCTCTGC
GCACTGAGCCAAGGGGAGGG

Downstream 100 bases:

>100_bases
TTCGGAAATTCAGTCTCCGAACAGAATCTCGTCCCAGCTTGGTACGGCCGAACGCCCTGATTTACGCTTGGCCGGTTTGG
CTGGTGCCTCGTGTTTGGTG

Product: type I phosphodiesterase/nucleotide pyrophosphatase

Products: NA

Alternate protein names: Phosphodiesterase; Type I Phosphodiesterase / Nucleotide Pyrophosphatase; AP Superfamily Protein; Nucleotide Pyrophosphatase; Truncated Phosphodiesterase; Protein Of AP Superfamily; Phosphodiesterase/Nucleotide Pyrophosphatase; LOW QUALITY PROTEIN Phosphodiesterase

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MLLEWATMSVETPDMDELLRLVPTVGYGDDVPADRRGGALHLSAVLPALSAAIGHPTPTKVHADPKACQRALGLPDAESA
IVVLVDGLGFWNLAMRLGHAPYLRSLMNESANQRPVATCAPSTTVAAMAAFGTGTCPGLTAMAGYTQLEPASHKLIQLIQ
FKDALATRPANPHIPVPPMVDPFDLQREETVFEKLAAQEVRVTSSGLPKFSRSPLTEAALRGTDYQGNVTPRDRVLAASR
ASRTPGLTYLYIRDADKVGHNYGWDSEHWVAAFEHIDAQLALLKRSAPKGTLIVIVADHGMVQTDMDQRIDIAVEPQLTR
GVSLVGGEPRSLMLYAEPDERPEDIACRWRDYLQDRALVRTRDEAIADGLFGPVCERVRPMLGDVVVQAAGAVTLVDSRT
QGDKATHLPSVHGSQTALEMDIPCLIDMA

Sequences:

>Translated_429_residues
MLLEWATMSVETPDMDELLRLVPTVGYGDDVPADRRGGALHLSAVLPALSAAIGHPTPTKVHADPKACQRALGLPDAESA
IVVLVDGLGFWNLAMRLGHAPYLRSLMNESANQRPVATCAPSTTVAAMAAFGTGTCPGLTAMAGYTQLEPASHKLIQLIQ
FKDALATRPANPHIPVPPMVDPFDLQREETVFEKLAAQEVRVTSSGLPKFSRSPLTEAALRGTDYQGNVTPRDRVLAASR
ASRTPGLTYLYIRDADKVGHNYGWDSEHWVAAFEHIDAQLALLKRSAPKGTLIVIVADHGMVQTDMDQRIDIAVEPQLTR
GVSLVGGEPRSLMLYAEPDERPEDIACRWRDYLQDRALVRTRDEAIADGLFGPVCERVRPMLGDVVVQAAGAVTLVDSRT
QGDKATHLPSVHGSQTALEMDIPCLIDMA
>Mature_429_residues
MLLEWATMSVETPDMDELLRLVPTVGYGDDVPADRRGGALHLSAVLPALSAAIGHPTPTKVHADPKACQRALGLPDAESA
IVVLVDGLGFWNLAMRLGHAPYLRSLMNESANQRPVATCAPSTTVAAMAAFGTGTCPGLTAMAGYTQLEPASHKLIQLIQ
FKDALATRPANPHIPVPPMVDPFDLQREETVFEKLAAQEVRVTSSGLPKFSRSPLTEAALRGTDYQGNVTPRDRVLAASR
ASRTPGLTYLYIRDADKVGHNYGWDSEHWVAAFEHIDAQLALLKRSAPKGTLIVIVADHGMVQTDMDQRIDIAVEPQLTR
GVSLVGGEPRSLMLYAEPDERPEDIACRWRDYLQDRALVRTRDEAIADGLFGPVCERVRPMLGDVVVQAAGAVTLVDSRT
QGDKATHLPSVHGSQTALEMDIPCLIDMA

Specific function: Unknown

COG id: COG1524

COG function: function code R; Uncharacterized proteins of the AP superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46412; Mature: 46412

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLEWATMSVETPDMDELLRLVPTVGYGDDVPADRRGGALHLSAVLPALSAAIGHPTPTK
CEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCE
VHADPKACQRALGLPDAESAIVVLVDGLGFWNLAMRLGHAPYLRSLMNESANQRPVATCA
EECCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCEECC
PSTTVAAMAAFGTGTCPGLTAMAGYTQLEPASHKLIQLIQFKDALATRPANPHIPVPPMV
CCHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DPFDLQREETVFEKLAAQEVRVTSSGLPKFSRSPLTEAALRGTDYQGNVTPRDRVLAASR
CCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHH
ASRTPGLTYLYIRDADKVGHNYGWDSEHWVAAFEHIDAQLALLKRSAPKGTLIVIVADHG
CCCCCCEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
MVQTDMDQRIDIAVEPQLTRGVSLVGGEPRSLMLYAEPDERPEDIACRWRDYLQDRALVR
CEECCCCCCEEEEECCHHHCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
TRDEAIADGLFGPVCERVRPMLGDVVVQAAGAVTLVDSRTQGDKATHLPSVHGSQTALEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEE
DIPCLIDMA
CCCEEEECC
>Mature Secondary Structure
MLLEWATMSVETPDMDELLRLVPTVGYGDDVPADRRGGALHLSAVLPALSAAIGHPTPTK
CEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCE
VHADPKACQRALGLPDAESAIVVLVDGLGFWNLAMRLGHAPYLRSLMNESANQRPVATCA
EECCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCEECC
PSTTVAAMAAFGTGTCPGLTAMAGYTQLEPASHKLIQLIQFKDALATRPANPHIPVPPMV
CCHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DPFDLQREETVFEKLAAQEVRVTSSGLPKFSRSPLTEAALRGTDYQGNVTPRDRVLAASR
CCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHH
ASRTPGLTYLYIRDADKVGHNYGWDSEHWVAAFEHIDAQLALLKRSAPKGTLIVIVADHG
CCCCCCEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
MVQTDMDQRIDIAVEPQLTRGVSLVGGEPRSLMLYAEPDERPEDIACRWRDYLQDRALVR
CEECCCCCCEEEEECCHHHCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
TRDEAIADGLFGPVCERVRPMLGDVVVQAAGAVTLVDSRTQGDKATHLPSVHGSQTALEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEE
DIPCLIDMA
CCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA