| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691858
Identifier: 213691858
GI number: 213691858
Start: 1149334
End: 1150623
Strand: Direct
Name: 213691858
Synonym: Blon_0967
Alternate gene names: NA
Gene position: 1149334-1150623 (Clockwise)
Preceding gene: 213691855
Following gene: 213691860
Centisome position: 40.57
GC content: 63.18
Gene sequence:
>1290_bases GTGCTACTTGAATGGGCAACTATGAGTGTTGAGACGCCGGATATGGACGAGTTGCTGCGGCTGGTGCCCACTGTGGGCTA TGGGGATGACGTCCCGGCCGATCGGCGTGGGGGAGCGCTGCACCTGTCCGCCGTGCTGCCCGCCTTGTCCGCCGCCATCG GACATCCGACTCCCACCAAGGTCCACGCCGATCCCAAGGCCTGCCAGCGCGCGTTGGGACTGCCCGACGCCGAATCGGCC ATCGTGGTGCTCGTGGACGGCCTCGGCTTCTGGAACCTCGCCATGCGCCTCGGCCACGCGCCCTATCTGCGTTCGCTGAT GAACGAAAGCGCCAATCAGCGTCCCGTCGCCACCTGCGCTCCAAGCACCACTGTGGCGGCCATGGCCGCATTCGGTACCG GAACCTGCCCGGGACTGACCGCAATGGCGGGCTATACGCAGCTCGAACCCGCCAGCCATAAGCTCATCCAACTCATCCAG TTCAAAGACGCGCTGGCAACCAGACCAGCCAATCCGCACATTCCTGTGCCGCCCATGGTCGATCCGTTCGACCTGCAGCG CGAGGAGACGGTGTTCGAGAAACTTGCGGCTCAAGAGGTGCGTGTCACGAGCTCGGGGTTGCCCAAGTTCTCCAGATCAC CATTGACCGAAGCCGCATTGCGAGGCACCGACTATCAAGGCAACGTCACCCCACGTGATCGTGTGCTGGCCGCCTCACGC GCCTCACGCACCCCCGGCCTGACCTACCTGTACATCCGTGACGCCGACAAAGTCGGCCACAATTACGGGTGGGATTCCGA ACACTGGGTGGCCGCATTCGAACATATCGACGCCCAGCTCGCGCTCCTGAAACGCAGCGCACCCAAAGGCACGCTGATCG TCATCGTGGCCGACCACGGCATGGTGCAAACCGACATGGACCAGCGGATTGACATCGCCGTTGAACCGCAGCTCACCCGA GGCGTGTCACTGGTCGGGGGAGAGCCGCGCTCGCTGATGCTGTATGCCGAGCCGGATGAACGACCTGAGGATATAGCTTG CCGGTGGCGCGATTACCTGCAAGACCGAGCCTTGGTGCGAACCAGGGATGAGGCCATCGCGGACGGATTGTTTGGACCGG TCTGCGAGCGAGTCCGGCCGATGCTTGGCGATGTGGTCGTGCAGGCAGCGGGAGCCGTGACCCTCGTCGATTCGCGTACG CAAGGAGACAAAGCCACTCACCTGCCGAGCGTGCATGGCTCCCAAACGGCATTGGAAATGGATATTCCCTGCCTGATCGA TATGGCCTGA
Upstream 100 bases:
>100_bases ATTCCAGTGTTTCAGTCGATGTGCGTTTGTTTGATTATGTGCGTTGGAGCGCACGGTTGTTATCGAGAACCGTTCTCTGC GCACTGAGCCAAGGGGAGGG
Downstream 100 bases:
>100_bases TTCGGAAATTCAGTCTCCGAACAGAATCTCGTCCCAGCTTGGTACGGCCGAACGCCCTGATTTACGCTTGGCCGGTTTGG CTGGTGCCTCGTGTTTGGTG
Product: type I phosphodiesterase/nucleotide pyrophosphatase
Products: NA
Alternate protein names: Phosphodiesterase; Type I Phosphodiesterase / Nucleotide Pyrophosphatase; AP Superfamily Protein; Nucleotide Pyrophosphatase; Truncated Phosphodiesterase; Protein Of AP Superfamily; Phosphodiesterase/Nucleotide Pyrophosphatase; LOW QUALITY PROTEIN Phosphodiesterase
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MLLEWATMSVETPDMDELLRLVPTVGYGDDVPADRRGGALHLSAVLPALSAAIGHPTPTKVHADPKACQRALGLPDAESA IVVLVDGLGFWNLAMRLGHAPYLRSLMNESANQRPVATCAPSTTVAAMAAFGTGTCPGLTAMAGYTQLEPASHKLIQLIQ FKDALATRPANPHIPVPPMVDPFDLQREETVFEKLAAQEVRVTSSGLPKFSRSPLTEAALRGTDYQGNVTPRDRVLAASR ASRTPGLTYLYIRDADKVGHNYGWDSEHWVAAFEHIDAQLALLKRSAPKGTLIVIVADHGMVQTDMDQRIDIAVEPQLTR GVSLVGGEPRSLMLYAEPDERPEDIACRWRDYLQDRALVRTRDEAIADGLFGPVCERVRPMLGDVVVQAAGAVTLVDSRT QGDKATHLPSVHGSQTALEMDIPCLIDMA
Sequences:
>Translated_429_residues MLLEWATMSVETPDMDELLRLVPTVGYGDDVPADRRGGALHLSAVLPALSAAIGHPTPTKVHADPKACQRALGLPDAESA IVVLVDGLGFWNLAMRLGHAPYLRSLMNESANQRPVATCAPSTTVAAMAAFGTGTCPGLTAMAGYTQLEPASHKLIQLIQ FKDALATRPANPHIPVPPMVDPFDLQREETVFEKLAAQEVRVTSSGLPKFSRSPLTEAALRGTDYQGNVTPRDRVLAASR ASRTPGLTYLYIRDADKVGHNYGWDSEHWVAAFEHIDAQLALLKRSAPKGTLIVIVADHGMVQTDMDQRIDIAVEPQLTR GVSLVGGEPRSLMLYAEPDERPEDIACRWRDYLQDRALVRTRDEAIADGLFGPVCERVRPMLGDVVVQAAGAVTLVDSRT QGDKATHLPSVHGSQTALEMDIPCLIDMA >Mature_429_residues MLLEWATMSVETPDMDELLRLVPTVGYGDDVPADRRGGALHLSAVLPALSAAIGHPTPTKVHADPKACQRALGLPDAESA IVVLVDGLGFWNLAMRLGHAPYLRSLMNESANQRPVATCAPSTTVAAMAAFGTGTCPGLTAMAGYTQLEPASHKLIQLIQ FKDALATRPANPHIPVPPMVDPFDLQREETVFEKLAAQEVRVTSSGLPKFSRSPLTEAALRGTDYQGNVTPRDRVLAASR ASRTPGLTYLYIRDADKVGHNYGWDSEHWVAAFEHIDAQLALLKRSAPKGTLIVIVADHGMVQTDMDQRIDIAVEPQLTR GVSLVGGEPRSLMLYAEPDERPEDIACRWRDYLQDRALVRTRDEAIADGLFGPVCERVRPMLGDVVVQAAGAVTLVDSRT QGDKATHLPSVHGSQTALEMDIPCLIDMA
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46412; Mature: 46412
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLEWATMSVETPDMDELLRLVPTVGYGDDVPADRRGGALHLSAVLPALSAAIGHPTPTK CEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCE VHADPKACQRALGLPDAESAIVVLVDGLGFWNLAMRLGHAPYLRSLMNESANQRPVATCA EECCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCEECC PSTTVAAMAAFGTGTCPGLTAMAGYTQLEPASHKLIQLIQFKDALATRPANPHIPVPPMV CCHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC DPFDLQREETVFEKLAAQEVRVTSSGLPKFSRSPLTEAALRGTDYQGNVTPRDRVLAASR CCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHH ASRTPGLTYLYIRDADKVGHNYGWDSEHWVAAFEHIDAQLALLKRSAPKGTLIVIVADHG CCCCCCEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC MVQTDMDQRIDIAVEPQLTRGVSLVGGEPRSLMLYAEPDERPEDIACRWRDYLQDRALVR CEECCCCCCEEEEECCHHHCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH TRDEAIADGLFGPVCERVRPMLGDVVVQAAGAVTLVDSRTQGDKATHLPSVHGSQTALEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEE DIPCLIDMA CCCEEEECC >Mature Secondary Structure MLLEWATMSVETPDMDELLRLVPTVGYGDDVPADRRGGALHLSAVLPALSAAIGHPTPTK CEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCE VHADPKACQRALGLPDAESAIVVLVDGLGFWNLAMRLGHAPYLRSLMNESANQRPVATCA EECCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCEECC PSTTVAAMAAFGTGTCPGLTAMAGYTQLEPASHKLIQLIQFKDALATRPANPHIPVPPMV CCHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC DPFDLQREETVFEKLAAQEVRVTSSGLPKFSRSPLTEAALRGTDYQGNVTPRDRVLAASR CCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHH ASRTPGLTYLYIRDADKVGHNYGWDSEHWVAAFEHIDAQLALLKRSAPKGTLIVIVADHG CCCCCCEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC MVQTDMDQRIDIAVEPQLTRGVSLVGGEPRSLMLYAEPDERPEDIACRWRDYLQDRALVR CEECCCCCCEEEEECCHHHCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH TRDEAIADGLFGPVCERVRPMLGDVVVQAAGAVTLVDSRTQGDKATHLPSVHGSQTALEM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEE DIPCLIDMA CCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA