| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is tyrA [H]
Identifier: 213691811
GI number: 213691811
Start: 1084729
End: 1085793
Strand: Direct
Name: tyrA [H]
Synonym: Blon_0919
Alternate gene names: 213691811
Gene position: 1084729-1085793 (Clockwise)
Preceding gene: 213691810
Following gene: 213691812
Centisome position: 38.29
GC content: 66.29
Gene sequence:
>1065_bases GTGGTAGACACAGTCGGAATCGTCGGACTCGGATTGATTGGCGGCTCGCTCGCACGCCGCCTGACCGAGCGCGGCGTACG CGTCATCGCGTGGAACCATCGCTCGCACCCCTACGCCCAGGCCGAAGCCGATGGCATTTTCTGCAAGAGCACGCTCTCCG AACTCATGGATGCCGAGCCGGATGTGGTCGTGCTGTGCAATCCGCTCAAGGCGATGCCCTCAATCCTCGCCGCCCTAGCC CCGCTTATGGGCGACCATCCGAACACCACGCTCACCGACGTGGGCTCAGTCAAGGGCATGGTCCGCGATCAGGTCAAGGC TGCCGCGCTGGGGAAGTGCTACGTCGGTGCCCATCCGATGGCCGGCAACGAACTGTCCGGCTGGCAGGCCGCCGACCCGC ATCTGTACGACGGGGCCCTATGGGCCATCACCGTGGACGAGTCCACGGACTACCGCCGCTTCCTCGACGTCGCCGCGATG ATTACCAAGGACGTCGGCAACCGCGTCATCGTCGTGGACGACGAGACGCATGACAAGGCCGCGGCGATGATCTCCCACAT GCCGCATGTGGTGTCCACCGCGCTGATCAACGAACTGGTCGCCAACCCGGACCGCAACATCGCCGCCGCACTGGCTGCCG GCTGCTGGAGGGACATGACCCGCGTGTCCCTGACCGACCCGGACCGCACGCGCGCGATGGTCGAGGAAGACTCGCTGAAC GTCGAAGTGCTGCTGCGCCGCATGGCGGCACGTCTGACCGATATGGCCGACCAACTGCACGCTGGTGCCGACGGCGAGCA GGATGTGATGGGATTCTTCGCCGAAGGCGACCCCTTCCGCCGGTACAAGGCCGCCGTGACGCGAGCCGGCATCACCGCTG CACAAGCTGGTACGGCCACCGCGCAGCAAGCCGGCACAACTGCCGCCGGATTCCCGGAACGCGAGCTCGCCGTCCCCGAA GCCGGCTGGCAGCAGACCTTGCTGTTCTCCGCACGCCGGGGAGAAGCCATCACCGGTTTCATCCATCCGCGTCAGGCCAT CGTCCAACTGCGCCCCGCCATGTAA
Upstream 100 bases:
>100_bases CGCCGGTCGACGCCTGGATGCTGCCCGAGGGCGGCGTCCACATCACCAATCGCGCGTCGGAAGGCTGGCAGTACGCCGAG GGAGCAAGGAAGGAACTGCT
Downstream 100 bases:
>100_bases CTGCGCCCCGCCATGTAACTGCGCCCCGCCATGCAGCCCGTGTGCAGGTTCCCCTCGCCGCCCGTCACGAAGAAGGCTGC GCGAGGGGGATGAAGTTCCC
Product: Prephenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MVDTVGIVGLGLIGGSLARRLTERGVRVIAWNHRSHPYAQAEADGIFCKSTLSELMDAEPDVVVLCNPLKAMPSILAALA PLMGDHPNTTLTDVGSVKGMVRDQVKAAALGKCYVGAHPMAGNELSGWQAADPHLYDGALWAITVDESTDYRRFLDVAAM ITKDVGNRVIVVDDETHDKAAAMISHMPHVVSTALINELVANPDRNIAAALAAGCWRDMTRVSLTDPDRTRAMVEEDSLN VEVLLRRMAARLTDMADQLHAGADGEQDVMGFFAEGDPFRRYKAAVTRAGITAAQAGTATAQQAGTTAAGFPERELAVPE AGWQQTLLFSARRGEAITGFIHPRQAIVQLRPAM
Sequences:
>Translated_354_residues MVDTVGIVGLGLIGGSLARRLTERGVRVIAWNHRSHPYAQAEADGIFCKSTLSELMDAEPDVVVLCNPLKAMPSILAALA PLMGDHPNTTLTDVGSVKGMVRDQVKAAALGKCYVGAHPMAGNELSGWQAADPHLYDGALWAITVDESTDYRRFLDVAAM ITKDVGNRVIVVDDETHDKAAAMISHMPHVVSTALINELVANPDRNIAAALAAGCWRDMTRVSLTDPDRTRAMVEEDSLN VEVLLRRMAARLTDMADQLHAGADGEQDVMGFFAEGDPFRRYKAAVTRAGITAAQAGTATAQQAGTTAAGFPERELAVPE AGWQQTLLFSARRGEAITGFIHPRQAIVQLRPAM >Mature_354_residues MVDTVGIVGLGLIGGSLARRLTERGVRVIAWNHRSHPYAQAEADGIFCKSTLSELMDAEPDVVVLCNPLKAMPSILAALA PLMGDHPNTTLTDVGSVKGMVRDQVKAAALGKCYVGAHPMAGNELSGWQAADPHLYDGALWAITVDESTDYRRFLDVAAM ITKDVGNRVIVVDDETHDKAAAMISHMPHVVSTALINELVANPDRNIAAALAAGCWRDMTRVSLTDPDRTRAMVEEDSLN VEVLLRRMAARLTDMADQLHAGADGEQDVMGFFAEGDPFRRYKAAVTRAGITAAQAGTATAQQAGTTAAGFPERELAVPE AGWQQTLLFSARRGEAITGFIHPRQAIVQLRPAM
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 37961; Mature: 37961
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDTVGIVGLGLIGGSLARRLTERGVRVIAWNHRSHPYAQAEADGIFCKSTLSELMDAEP CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHCCCC DVVVLCNPLKAMPSILAALAPLMGDHPNTTLTDVGSVKGMVRDQVKAAALGKCYVGAHPM CEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCC AGNELSGWQAADPHLYDGALWAITVDESTDYRRFLDVAAMITKDVGNRVIVVDDETHDKA CCCCCCCCCCCCCCEECCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHH AAMISHMPHVVSTALINELVANPDRNIAAALAAGCWRDMTRVSLTDPDRTRAMVEEDSLN HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCCC VEVLLRRMAARLTDMADQLHAGADGEQDVMGFFAEGDPFRRYKAAVTRAGITAAQAGTAT HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCHHHHHHHHHHHHCCHHHCCCCCH AQQAGTTAAGFPERELAVPEAGWQQTLLFSARRGEAITGFIHPRQAIVQLRPAM HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECHHHHHHHHCCCC >Mature Secondary Structure MVDTVGIVGLGLIGGSLARRLTERGVRVIAWNHRSHPYAQAEADGIFCKSTLSELMDAEP CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHCCCC DVVVLCNPLKAMPSILAALAPLMGDHPNTTLTDVGSVKGMVRDQVKAAALGKCYVGAHPM CEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCC AGNELSGWQAADPHLYDGALWAITVDESTDYRRFLDVAAMITKDVGNRVIVVDDETHDKA CCCCCCCCCCCCCCEECCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHH AAMISHMPHVVSTALINELVANPDRNIAAALAAGCWRDMTRVSLTDPDRTRAMVEEDSLN HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCCC VEVLLRRMAARLTDMADQLHAGADGEQDVMGFFAEGDPFRRYKAAVTRAGITAAQAGTAT HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCHHHHHHHHHHHHCCHHHCCCCCH AQQAGTTAAGFPERELAVPEAGWQQTLLFSARRGEAITGFIHPRQAIVQLRPAM HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA