Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is tyrA [H]

Identifier: 213691811

GI number: 213691811

Start: 1084729

End: 1085793

Strand: Direct

Name: tyrA [H]

Synonym: Blon_0919

Alternate gene names: 213691811

Gene position: 1084729-1085793 (Clockwise)

Preceding gene: 213691810

Following gene: 213691812

Centisome position: 38.29

GC content: 66.29

Gene sequence:

>1065_bases
GTGGTAGACACAGTCGGAATCGTCGGACTCGGATTGATTGGCGGCTCGCTCGCACGCCGCCTGACCGAGCGCGGCGTACG
CGTCATCGCGTGGAACCATCGCTCGCACCCCTACGCCCAGGCCGAAGCCGATGGCATTTTCTGCAAGAGCACGCTCTCCG
AACTCATGGATGCCGAGCCGGATGTGGTCGTGCTGTGCAATCCGCTCAAGGCGATGCCCTCAATCCTCGCCGCCCTAGCC
CCGCTTATGGGCGACCATCCGAACACCACGCTCACCGACGTGGGCTCAGTCAAGGGCATGGTCCGCGATCAGGTCAAGGC
TGCCGCGCTGGGGAAGTGCTACGTCGGTGCCCATCCGATGGCCGGCAACGAACTGTCCGGCTGGCAGGCCGCCGACCCGC
ATCTGTACGACGGGGCCCTATGGGCCATCACCGTGGACGAGTCCACGGACTACCGCCGCTTCCTCGACGTCGCCGCGATG
ATTACCAAGGACGTCGGCAACCGCGTCATCGTCGTGGACGACGAGACGCATGACAAGGCCGCGGCGATGATCTCCCACAT
GCCGCATGTGGTGTCCACCGCGCTGATCAACGAACTGGTCGCCAACCCGGACCGCAACATCGCCGCCGCACTGGCTGCCG
GCTGCTGGAGGGACATGACCCGCGTGTCCCTGACCGACCCGGACCGCACGCGCGCGATGGTCGAGGAAGACTCGCTGAAC
GTCGAAGTGCTGCTGCGCCGCATGGCGGCACGTCTGACCGATATGGCCGACCAACTGCACGCTGGTGCCGACGGCGAGCA
GGATGTGATGGGATTCTTCGCCGAAGGCGACCCCTTCCGCCGGTACAAGGCCGCCGTGACGCGAGCCGGCATCACCGCTG
CACAAGCTGGTACGGCCACCGCGCAGCAAGCCGGCACAACTGCCGCCGGATTCCCGGAACGCGAGCTCGCCGTCCCCGAA
GCCGGCTGGCAGCAGACCTTGCTGTTCTCCGCACGCCGGGGAGAAGCCATCACCGGTTTCATCCATCCGCGTCAGGCCAT
CGTCCAACTGCGCCCCGCCATGTAA

Upstream 100 bases:

>100_bases
CGCCGGTCGACGCCTGGATGCTGCCCGAGGGCGGCGTCCACATCACCAATCGCGCGTCGGAAGGCTGGCAGTACGCCGAG
GGAGCAAGGAAGGAACTGCT

Downstream 100 bases:

>100_bases
CTGCGCCCCGCCATGTAACTGCGCCCCGCCATGCAGCCCGTGTGCAGGTTCCCCTCGCCGCCCGTCACGAAGAAGGCTGC
GCGAGGGGGATGAAGTTCCC

Product: Prephenate dehydrogenase

Products: NA

Alternate protein names: PDH [H]

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MVDTVGIVGLGLIGGSLARRLTERGVRVIAWNHRSHPYAQAEADGIFCKSTLSELMDAEPDVVVLCNPLKAMPSILAALA
PLMGDHPNTTLTDVGSVKGMVRDQVKAAALGKCYVGAHPMAGNELSGWQAADPHLYDGALWAITVDESTDYRRFLDVAAM
ITKDVGNRVIVVDDETHDKAAAMISHMPHVVSTALINELVANPDRNIAAALAAGCWRDMTRVSLTDPDRTRAMVEEDSLN
VEVLLRRMAARLTDMADQLHAGADGEQDVMGFFAEGDPFRRYKAAVTRAGITAAQAGTATAQQAGTTAAGFPERELAVPE
AGWQQTLLFSARRGEAITGFIHPRQAIVQLRPAM

Sequences:

>Translated_354_residues
MVDTVGIVGLGLIGGSLARRLTERGVRVIAWNHRSHPYAQAEADGIFCKSTLSELMDAEPDVVVLCNPLKAMPSILAALA
PLMGDHPNTTLTDVGSVKGMVRDQVKAAALGKCYVGAHPMAGNELSGWQAADPHLYDGALWAITVDESTDYRRFLDVAAM
ITKDVGNRVIVVDDETHDKAAAMISHMPHVVSTALINELVANPDRNIAAALAAGCWRDMTRVSLTDPDRTRAMVEEDSLN
VEVLLRRMAARLTDMADQLHAGADGEQDVMGFFAEGDPFRRYKAAVTRAGITAAQAGTATAQQAGTTAAGFPERELAVPE
AGWQQTLLFSARRGEAITGFIHPRQAIVQLRPAM
>Mature_354_residues
MVDTVGIVGLGLIGGSLARRLTERGVRVIAWNHRSHPYAQAEADGIFCKSTLSELMDAEPDVVVLCNPLKAMPSILAALA
PLMGDHPNTTLTDVGSVKGMVRDQVKAAALGKCYVGAHPMAGNELSGWQAADPHLYDGALWAITVDESTDYRRFLDVAAM
ITKDVGNRVIVVDDETHDKAAAMISHMPHVVSTALINELVANPDRNIAAALAAGCWRDMTRVSLTDPDRTRAMVEEDSLN
VEVLLRRMAARLTDMADQLHAGADGEQDVMGFFAEGDPFRRYKAAVTRAGITAAQAGTATAQQAGTTAAGFPERELAVPE
AGWQQTLLFSARRGEAITGFIHPRQAIVQLRPAM

Specific function: Unknown

COG id: COG0287

COG function: function code E; Prephenate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR016040
- InterPro:   IPR003099 [H]

Pfam domain/function: PF02153 PDH [H]

EC number: =1.3.1.12 [H]

Molecular weight: Translated: 37961; Mature: 37961

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDTVGIVGLGLIGGSLARRLTERGVRVIAWNHRSHPYAQAEADGIFCKSTLSELMDAEP
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHCCCC
DVVVLCNPLKAMPSILAALAPLMGDHPNTTLTDVGSVKGMVRDQVKAAALGKCYVGAHPM
CEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
AGNELSGWQAADPHLYDGALWAITVDESTDYRRFLDVAAMITKDVGNRVIVVDDETHDKA
CCCCCCCCCCCCCCEECCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHH
AAMISHMPHVVSTALINELVANPDRNIAAALAAGCWRDMTRVSLTDPDRTRAMVEEDSLN
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCCC
VEVLLRRMAARLTDMADQLHAGADGEQDVMGFFAEGDPFRRYKAAVTRAGITAAQAGTAT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCHHHHHHHHHHHHCCHHHCCCCCH
AQQAGTTAAGFPERELAVPEAGWQQTLLFSARRGEAITGFIHPRQAIVQLRPAM
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECHHHHHHHHCCCC
>Mature Secondary Structure
MVDTVGIVGLGLIGGSLARRLTERGVRVIAWNHRSHPYAQAEADGIFCKSTLSELMDAEP
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHCCCC
DVVVLCNPLKAMPSILAALAPLMGDHPNTTLTDVGSVKGMVRDQVKAAALGKCYVGAHPM
CEEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
AGNELSGWQAADPHLYDGALWAITVDESTDYRRFLDVAAMITKDVGNRVIVVDDETHDKA
CCCCCCCCCCCCCCEECCEEEEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHH
AAMISHMPHVVSTALINELVANPDRNIAAALAAGCWRDMTRVSLTDPDRTRAMVEEDSLN
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHCCCCC
VEVLLRRMAARLTDMADQLHAGADGEQDVMGFFAEGDPFRRYKAAVTRAGITAAQAGTAT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCHHHHHHHHHHHHCCHHHCCCCCH
AQQAGTTAAGFPERELAVPEAGWQQTLLFSARRGEAITGFIHPRQAIVQLRPAM
HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA