| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yihR [H]
Identifier: 213691789
GI number: 213691789
Start: 1062387
End: 1063343
Strand: Reverse
Name: yihR [H]
Synonym: Blon_0897
Alternate gene names: 213691789
Gene position: 1063343-1062387 (Counterclockwise)
Preceding gene: 213691791
Following gene: 213691788
Centisome position: 37.54
GC content: 59.87
Gene sequence:
>957_bases ATGACGAGTAAAACACCACGCACCGGAAATCAGTATTCGATTCACTATGGCGATTATTCCGCCGTCATCTGCGAACTCGG TGCCAAGATTCGCCGATTCGATTATCAAGGCAAGGAAATTTTCTGCCCGTTCGGCGTCAACGACCTGACCCCCACCTGTA ACGGCTATGTGCTGGCCCCGTGGCCGAATCGCATCGAAAACGGCGAATACGATTTCGATGGCAAGCATTACTGCGCGCCG GTTAACGAATATCATCCCGCACCGCGCAACAATGCGAACCACGGATACGCCTACCACTACATGTGGAAGCTTGAATCGTT GACCGATAGCGCCGTGACGCTTTCGCTGCGCTTCCCCAACCTGGACGGATACCCGTTCGATGTGACCGTGACCGTCACCT ACGAACTCGGCGACAACGGCATGACCGTGACCGTCAATGCCCGCAATGATGGCGACGAGCCGGCACCGTGGGCTCTCGGC CTGCATCCGTGGCTGGCCAACGGCAAGCAGGGCGCGACTGTCGCCGAACGCGATGCCGACTCCGCCGCCTGCCACCTGCA GATTAAGGCCGACAGTCATGTGACGGTGAACGAGGCGCTGATTCCCACCGGCACCGAACCGGTTACCGGCATCTACGACC TGAACGATGGCCCGACGCTCGAAGGCCGCGCCTTTGATGATGCCTGGGTCGACGTGGAGCGTGCCGCCGATGGTACGACC ACCACCACATTCACCCGCCCGGACGGTATTGAAGTGAAGCTCATTGGCGATGAGACGATCAATGCTTGGCAGTGCTACAC CGCCACTGGCGCGCCGTTCTCCGAGCATCCGTATGGTATCGCCGTCGAACCGATGACCGCCCCGGCCAATGCCTTCCGCA CTGGTGACCACTTGGTGACGCTCGCCCCCAACGGCGACTACACCACTGTGGTCCGCTACGAAGTAGCCCAGAAGTAG
Upstream 100 bases:
>100_bases GGCTATCGCCAATCCCCGCCTCGATAGAGGAGACGCGCTAGACTGGAGCCAGCGATAGCAGGAGCTACCGGCTCACCAAC CTCACTACGGGAGTGATTCC
Downstream 100 bases:
>100_bases TTCCGTTACGTTGGCTCCCCGCCAGAGGGGAGCCAATTATTTATCCTTATGTGCCGCCGCGTCTTGGGACTTGTGCGATA CGATTGTGAGCGGTAACAAT
Product: Aldose 1-epimerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTSKTPRTGNQYSIHYGDYSAVICELGAKIRRFDYQGKEIFCPFGVNDLTPTCNGYVLAPWPNRIENGEYDFDGKHYCAP VNEYHPAPRNNANHGYAYHYMWKLESLTDSAVTLSLRFPNLDGYPFDVTVTVTYELGDNGMTVTVNARNDGDEPAPWALG LHPWLANGKQGATVAERDADSAACHLQIKADSHVTVNEALIPTGTEPVTGIYDLNDGPTLEGRAFDDAWVDVERAADGTT TTTFTRPDGIEVKLIGDETINAWQCYTATGAPFSEHPYGIAVEPMTAPANAFRTGDHLVTLAPNGDYTTVVRYEVAQK
Sequences:
>Translated_318_residues MTSKTPRTGNQYSIHYGDYSAVICELGAKIRRFDYQGKEIFCPFGVNDLTPTCNGYVLAPWPNRIENGEYDFDGKHYCAP VNEYHPAPRNNANHGYAYHYMWKLESLTDSAVTLSLRFPNLDGYPFDVTVTVTYELGDNGMTVTVNARNDGDEPAPWALG LHPWLANGKQGATVAERDADSAACHLQIKADSHVTVNEALIPTGTEPVTGIYDLNDGPTLEGRAFDDAWVDVERAADGTT TTTFTRPDGIEVKLIGDETINAWQCYTATGAPFSEHPYGIAVEPMTAPANAFRTGDHLVTLAPNGDYTTVVRYEVAQK >Mature_317_residues TSKTPRTGNQYSIHYGDYSAVICELGAKIRRFDYQGKEIFCPFGVNDLTPTCNGYVLAPWPNRIENGEYDFDGKHYCAPV NEYHPAPRNNANHGYAYHYMWKLESLTDSAVTLSLRFPNLDGYPFDVTVTVTYELGDNGMTVTVNARNDGDEPAPWALGL HPWLANGKQGATVAERDADSAACHLQIKADSHVTVNEALIPTGTEPVTGIYDLNDGPTLEGRAFDDAWVDVERAADGTTT TTFTRPDGIEVKLIGDETINAWQCYTATGAPFSEHPYGIAVEPMTAPANAFRTGDHLVTLAPNGDYTTVVRYEVAQK
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790311, Length=299, Percent_Identity=31.1036789297659, Blast_Score=119, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: NA
Molecular weight: Translated: 34926; Mature: 34795
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKTPRTGNQYSIHYGDYSAVICELGAKIRRFDYQGKEIFCPFGVNDLTPTCNGYVLAP CCCCCCCCCCEEEEEECCHHHHEEHHCCCEEEEECCCCEEEEECCCCCCCCCCCCEEECC WPNRIENGEYDFDGKHYCAPVNEYHPAPRNNANHGYAYHYMWKLESLTDSAVTLSLRFPN CCCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCC LDGYPFDVTVTVTYELGDNGMTVTVNARNDGDEPAPWALGLHPWLANGKQGATVAERDAD CCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCEEEECCHHHCCCCCCCEEEECCCC SAACHLQIKADSHVTVNEALIPTGTEPVTGIYDLNDGPTLEGRAFDDAWVDVERAADGTT CEEEEEEEECCCCEEECCEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCE TTTFTRPDGIEVKLIGDETINAWQCYTATGAPFSEHPYGIAVEPMTAPANAFRTGDHLVT EEEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCEECCCEEEE LAPNGDYTTVVRYEVAQK ECCCCCEEEEEEEEECCC >Mature Secondary Structure TSKTPRTGNQYSIHYGDYSAVICELGAKIRRFDYQGKEIFCPFGVNDLTPTCNGYVLAP CCCCCCCCCEEEEEECCHHHHEEHHCCCEEEEECCCCEEEEECCCCCCCCCCCCEEECC WPNRIENGEYDFDGKHYCAPVNEYHPAPRNNANHGYAYHYMWKLESLTDSAVTLSLRFPN CCCCCCCCCCCCCCCEEECCHHHCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCC LDGYPFDVTVTVTYELGDNGMTVTVNARNDGDEPAPWALGLHPWLANGKQGATVAERDAD CCCCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCEEEECCHHHCCCCCCCEEEECCCC SAACHLQIKADSHVTVNEALIPTGTEPVTGIYDLNDGPTLEGRAFDDAWVDVERAADGTT CEEEEEEEECCCCEEECCEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCE TTTFTRPDGIEVKLIGDETINAWQCYTATGAPFSEHPYGIAVEPMTAPANAFRTGDHLVT EEEEECCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCEECCCEEEE LAPNGDYTTVVRYEVAQK ECCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]