| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is folC [H]
Identifier: 213691782
GI number: 213691782
Start: 1051660
End: 1053285
Strand: Direct
Name: folC [H]
Synonym: Blon_0890
Alternate gene names: 213691782
Gene position: 1051660-1053285 (Clockwise)
Preceding gene: 213691778
Following gene: 213691783
Centisome position: 37.13
GC content: 63.28
Gene sequence:
>1626_bases ATGTCATTCGAGCATCCGAATCGGAACAATGAGAGCATGCGGGACGTCGAACTGGACATCATGAGCCGCCCGCCGGAGCA TAACACCACCAATCTGGATCTCGACCGGATGAACCTGATGCTCGACATCCTGGGCCACCCGGAGCAGTCGTTCCGCGTGA TTCATATCACCGGCACCAACGGCAAAGGCTCCACCGCACGCATGGCCGAGGCCATCTGCCGCGCCTACGGTATGCGCACC GGCCTGTACACTTCGCCGCATCTGGAGAAGATCAACGAGCGTATCGCCATCAACGGCCAGCAGCTGTCCGACGACGATTT CATCGACATCTGGGACCAGACCAAGGATCTCGTGGCCCTGGTGGACGCCAAGATGGAGGAGCAAGGCAAGCCGAAGATGA GCTTCTTCGAGGTGCTCACCGCCATGGCCATCTGGAAGTTCGCCGACACGCCCGTGGACGTGGCCATCGTCGAGGTCGGC ATGGGAGGCCTGTGGGACGCCACCAACGTGCTCAACGCGGATGCGGCCATCATCGGTCCGGTGGACATGGACCACATGCA GTGGCTGGGCGACACCGTCGAACAGATCGCCACCGAGAAGGCCGGCATCATCAAGCCGAACTGCACCGCCATCATCGGCC CGCAGCCGCATGAGGAAGCCGTCATGCCGATTCTCACCGAAGCCGCCGAACGCAACCACGCCACGCTCGTGCGCGACGGT TACGAAATGACCGTGTCCGACCGCATGGCTGCAGTCGGCGGACAAGTCGCCACCCTGACCACGCCCAACGGCACTTACGA GGGCGTGCCGATCGCCAAGTTCGGCGAGCATCAGGCCCATAACGCACTTGCCGCGCTCGTCGCCGCCGAAGTGGTGATTC CGGTCAATGGCCCGCTGGACGGCGACTTGGTGGCCGAGGCGTTGAGCTCGGTCAAGATTCCCGGCCGCATCGAACAGATC CGCACCTCGCCGACCATCATTCTGGATGGCGGACACAACGTGAATGCCGCCGAAGCCCTACGCAAGGCCATCGAGGAAAG CTACGACTTCAAGCAGCTGGTCGGTGTGGTCGCCATGATGCGCGACAAGCAGGTCGAGGAATATCTGGGTGTTCTGGAGC CGATCCTGAGCTCCGTGGTGGTCACCGAGAACTCGTGGCGCGAGCGTGTGATGCCGGCCGATGAACTTGAGAAGATTGCC GTGGACGTGTTCGGCCGTGACCGTGTGATCAAGGAAGCGAACCTGCCCGACGCGATTCAGACTGCCGTCAACATGGTCGA TGCCGAAGACGAGCTGGGCGTGGGCTACGGCCACGGCGTGCTTATCTGCGGCAGCTTCGTCACCGCCGGCGACGCACGCC TGATGCTTGAGGAACACGCCAGCCCCACGATGAGGCAGGCCATGGCCGTCCATCAGCCGGCGGTCGACCCGGACGATTCG GATCGGCCGGCAGACAAGGCCGAGGATGAGGCCGCCGACAACCTCGAGGATTCGGTAAGCCCGGACGACTTCGACGTATT CGACGTCCTCGGCCTCGGTAAGGAACAGGCCAGTGACGCCGGTAACGCCGGCACCGGCACGGCCAGTGCCGACACAGGCA CCGACGATTCCGCCGACGCCCGGTAA
Upstream 100 bases:
>100_bases TGCGGGCATGCGTAGACATGACGAGAATGGCGCGAACACGTAAGTGGCATACGCACTCCGAACGGTGCAACAGCAACACG AGCAGAGGTTAGAAGAGAAT
Downstream 100 bases:
>100_bases CCCGAATCCAAGGCATATCGGATACCCGGACACACGGAAAACAATCTCACGCCATGTATCTCAAGGAACTCACCCTCCGC GGATTCAAATCCTTCGCCTC
Product: FolC bifunctional protein
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolate synthase; Tetrahydrofolylpolyglutamate synthase [H]
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MSFEHPNRNNESMRDVELDIMSRPPEHNTTNLDLDRMNLMLDILGHPEQSFRVIHITGTNGKGSTARMAEAICRAYGMRT GLYTSPHLEKINERIAINGQQLSDDDFIDIWDQTKDLVALVDAKMEEQGKPKMSFFEVLTAMAIWKFADTPVDVAIVEVG MGGLWDATNVLNADAAIIGPVDMDHMQWLGDTVEQIATEKAGIIKPNCTAIIGPQPHEEAVMPILTEAAERNHATLVRDG YEMTVSDRMAAVGGQVATLTTPNGTYEGVPIAKFGEHQAHNALAALVAAEVVIPVNGPLDGDLVAEALSSVKIPGRIEQI RTSPTIILDGGHNVNAAEALRKAIEESYDFKQLVGVVAMMRDKQVEEYLGVLEPILSSVVVTENSWRERVMPADELEKIA VDVFGRDRVIKEANLPDAIQTAVNMVDAEDELGVGYGHGVLICGSFVTAGDARLMLEEHASPTMRQAMAVHQPAVDPDDS DRPADKAEDEAADNLEDSVSPDDFDVFDVLGLGKEQASDAGNAGTGTASADTGTDDSADAR
Sequences:
>Translated_541_residues MSFEHPNRNNESMRDVELDIMSRPPEHNTTNLDLDRMNLMLDILGHPEQSFRVIHITGTNGKGSTARMAEAICRAYGMRT GLYTSPHLEKINERIAINGQQLSDDDFIDIWDQTKDLVALVDAKMEEQGKPKMSFFEVLTAMAIWKFADTPVDVAIVEVG MGGLWDATNVLNADAAIIGPVDMDHMQWLGDTVEQIATEKAGIIKPNCTAIIGPQPHEEAVMPILTEAAERNHATLVRDG YEMTVSDRMAAVGGQVATLTTPNGTYEGVPIAKFGEHQAHNALAALVAAEVVIPVNGPLDGDLVAEALSSVKIPGRIEQI RTSPTIILDGGHNVNAAEALRKAIEESYDFKQLVGVVAMMRDKQVEEYLGVLEPILSSVVVTENSWRERVMPADELEKIA VDVFGRDRVIKEANLPDAIQTAVNMVDAEDELGVGYGHGVLICGSFVTAGDARLMLEEHASPTMRQAMAVHQPAVDPDDS DRPADKAEDEAADNLEDSVSPDDFDVFDVLGLGKEQASDAGNAGTGTASADTGTDDSADAR >Mature_540_residues SFEHPNRNNESMRDVELDIMSRPPEHNTTNLDLDRMNLMLDILGHPEQSFRVIHITGTNGKGSTARMAEAICRAYGMRTG LYTSPHLEKINERIAINGQQLSDDDFIDIWDQTKDLVALVDAKMEEQGKPKMSFFEVLTAMAIWKFADTPVDVAIVEVGM GGLWDATNVLNADAAIIGPVDMDHMQWLGDTVEQIATEKAGIIKPNCTAIIGPQPHEEAVMPILTEAAERNHATLVRDGY EMTVSDRMAAVGGQVATLTTPNGTYEGVPIAKFGEHQAHNALAALVAAEVVIPVNGPLDGDLVAEALSSVKIPGRIEQIR TSPTIILDGGHNVNAAEALRKAIEESYDFKQLVGVVAMMRDKQVEEYLGVLEPILSSVVVTENSWRERVMPADELEKIAV DVFGRDRVIKEANLPDAIQTAVNMVDAEDELGVGYGHGVLICGSFVTAGDARLMLEEHASPTMRQAMAVHQPAVDPDDSD RPADKAEDEAADNLEDSVSPDDFDVFDVLGLGKEQASDAGNAGTGTASADTGTDDSADAR
Specific function: Conversion of folates to polyglutamate derivatives. It preferes 5,10-methylenetetrahydrofolate, rather than 10- formyltetrahydrofolate as folate substrate [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932990, Length=345, Percent_Identity=31.5942028985507, Blast_Score=139, Evalue=8e-33, Organism=Homo sapiens, GI66932984, Length=345, Percent_Identity=31.5942028985507, Blast_Score=139, Evalue=1e-32, Organism=Escherichia coli, GI1788654, Length=350, Percent_Identity=32.8571428571429, Blast_Score=163, Evalue=3e-41, Organism=Caenorhabditis elegans, GI17553148, Length=333, Percent_Identity=30.03003003003, Blast_Score=128, Evalue=8e-30, Organism=Caenorhabditis elegans, GI71984923, Length=333, Percent_Identity=30.03003003003, Blast_Score=128, Evalue=9e-30, Organism=Caenorhabditis elegans, GI17553150, Length=333, Percent_Identity=30.03003003003, Blast_Score=128, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6323760, Length=450, Percent_Identity=27.5555555555556, Blast_Score=143, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6324815, Length=250, Percent_Identity=32.8, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI24641571, Length=200, Percent_Identity=35.5, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI24581568, Length=156, Percent_Identity=37.1794871794872, Blast_Score=99, Evalue=9e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 58458; Mature: 58327
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: PS01012 FOLYLPOLYGLU_SYNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEHPNRNNESMRDVELDIMSRPPEHNTTNLDLDRMNLMLDILGHPEQSFRVIHITGTN CCCCCCCCCCCCHHHEEEHECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCC GKGSTARMAEAICRAYGMRTGLYTSPHLEKINERIAINGQQLSDDDFIDIWDQTKDLVAL CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCEEHHHHHHHHHHH VDAKMEEQGKPKMSFFEVLTAMAIWKFADTPVDVAIVEVGMGGLWDATNVLNADAAIIGP HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCCCEEECC VDMDHMQWLGDTVEQIATEKAGIIKPNCTAIIGPQPHEEAVMPILTEAAERNHATLVRDG CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEECC YEMTVSDRMAAVGGQVATLTTPNGTYEGVPIAKFGEHQAHNALAALVAAEVVIPVNGPLD CEEEHHHHHHHHCCEEEEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHHEEEECCCCCC GDLVAEALSSVKIPGRIEQIRTSPTIILDGGHNVNAAEALRKAIEESYDFKQLVGVVAMM HHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH RDKQVEEYLGVLEPILSSVVVTENSWRERVMPADELEKIAVDVFGRDRVIKEANLPDAIQ HHHHHHHHHHHHHHHHHHEEECCCCHHHHCCCHHHHHHHHHHHCCCCCCHHCCCCCHHHH TAVNMVDAEDELGVGYGHGVLICGSFVTAGDARLMLEEHASPTMRQAMAVHQPAVDPDDS HHHHHHCCCCCCCCCCCCCEEEECCHHHCCCCEEHHHHCCCHHHHHHHHHHCCCCCCCCC DRPADKAEDEAADNLEDSVSPDDFDVFDVLGLGKEQASDAGNAGTGTASADTGTDDSADA CCCCCCCHHHHHHCHHHCCCCCCCCHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC R C >Mature Secondary Structure SFEHPNRNNESMRDVELDIMSRPPEHNTTNLDLDRMNLMLDILGHPEQSFRVIHITGTN CCCCCCCCCCCHHHEEEHECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCC GKGSTARMAEAICRAYGMRTGLYTSPHLEKINERIAINGQQLSDDDFIDIWDQTKDLVAL CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCEEHHHHHHHHHHH VDAKMEEQGKPKMSFFEVLTAMAIWKFADTPVDVAIVEVGMGGLWDATNVLNADAAIIGP HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHCCCCCEEECC VDMDHMQWLGDTVEQIATEKAGIIKPNCTAIIGPQPHEEAVMPILTEAAERNHATLVRDG CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEECC YEMTVSDRMAAVGGQVATLTTPNGTYEGVPIAKFGEHQAHNALAALVAAEVVIPVNGPLD CEEEHHHHHHHHCCEEEEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHHEEEECCCCCC GDLVAEALSSVKIPGRIEQIRTSPTIILDGGHNVNAAEALRKAIEESYDFKQLVGVVAMM HHHHHHHHHHCCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH RDKQVEEYLGVLEPILSSVVVTENSWRERVMPADELEKIAVDVFGRDRVIKEANLPDAIQ HHHHHHHHHHHHHHHHHHEEECCCCHHHHCCCHHHHHHHHHHHCCCCCCHHCCCCCHHHH TAVNMVDAEDELGVGYGHGVLICGSFVTAGDARLMLEEHASPTMRQAMAVHQPAVDPDDS HHHHHHCCCCCCCCCCCCCEEEECCHHHCCCCEEHHHHCCCHHHHHHHHHHCCCCCCCCC DRPADKAEDEAADNLEDSVSPDDFDVFDVLGLGKEQASDAGNAGTGTASADTGTDDSADA CCCCCCCHHHHHHCHHHCCCCCCCCHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8419299; 9384377; 2553669 [H]