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The map label for this gene is ynbA [H]

Identifier: 213691733

GI number: 213691733

Start: 989767

End: 991272

Strand: Direct

Name: ynbA [H]

Synonym: Blon_0839

Alternate gene names: 213691733

Gene position: 989767-991272 (Clockwise)

Preceding gene: 213691729

Following gene: 213691734

Centisome position: 34.94

GC content: 63.35

Gene sequence:

>1506_bases
TTGACCGACAACACCCAGTACACCGACATCGACCGCGGCAACAACGACGTTACCCCTGAAGGTGTGCTGGCCGGGCAGTC
CGAAGTGCTGCTCGACGACAGCCAGCGCGCGACCGGCTGGCATGAGGACGCCAACCAGGAATGGGAGGAGCGCGAGGCCC
GCAACGAGCTCAAGCATGTCGCCGGTCTCGGCGAGCTGCAGGACGTCACCGAAGTCGAATACCGCAAGGTGCGTCTGGAA
CGTGTGGTGCTCGTCGGCGTCTGGTCGTCCGCCGTCACCACGCAAGCCAAGGCCGAGGAATCGTTGAGGGAGTTGGCGGC
GCTCGCCGAAACCGCCGGTGCGGTGGTATGCGATGGTTTGCTGCAGCATCGCTCCAAGCCGGATGCAGCCACGTACGTTG
GTTCCGGCAAAGCCAAGGAGATTGCCGACATCGTGGCGCGTGAGGAAGCCGATACGATTATCGTGGACGACGACCTGCCG
CCGTCACAGCGCCGTGCATTGGAGGACGCCGCCAAAGTCAAGGTGGTGGATCGCACCGCGGTGATTCTGGACATCTTCGC
CCAGCACGCCACCTCGCGTGAAGGTAAGGCGCAGGTGGAGTTGGCGCAGCTCGAATACATGCTGCCCCGACTGCGTGGTT
GGGGTGGTTCGCTGTCCCGCCAGGCCGGCGGTCGCGCGGCCGGCGCGGATGCGGGCATCGGATCGCGAGGCCCGGGCGAG
ACCAAAATCGAAATGGACCGTCGTGTGATTCGCACGCGTATCGCCAGACTGCGCCGTCAGATTCGTGAGATGGCCCCGGC
GCGTGAGGTCAAGCGCGGTTCGCGCCGTCGCTTCGGCCTGCCCACAGTGGCCGTGGTCGGCTACACGAACGCCGGCAAAT
CCTCGTTGACCAACCGTCTGACCGGCTCGGCCGAACTGGTGGAAAACGCGCTGTTCGCCACATTGGACACGGCCGTGCGC
CGCGCCAAAACCCGCGATGGACGCGCTTACGCCTATGTGGACACGGTCGGTTTCGTGCGCCGCCTGCCCACCCAGCTGGT
CGAGGCGTTCAAATCCACCCTGGAAGAGGTGGCCGAGGCCGATGTGATCCTGCACGTGGTCGATGGCTCACACCCTGACC
CGTTCTCTCAGGTCGATGCGGTCAACGATGTGTTGGCGGACATCGAAGGCACGGCCTCGATTCCTCGTATTCTCGTATTC
AACAAGGCCGATCAGGCGGACGAGACAACTCGTGAACGACTTGCCGCACTGCAGCCGGATGCGTTCATCGTCTCCGCCTA
TACCGGTGAGGGATTGGACGAGCTGCGTACCGCGGTCGAAAGTCTGCTGCCGGTCCCGCATGTGCATGTCAACGCTCTGC
TGCCGTATACCGCTGGCTCCCTGATCTCTCGTGTACGCGAATACGGCAAGGTAGACAAGGTGGAGTACCGCGATGATGGC
ATACTGCTTGAAGCGGACGTTGACGCCCATCTTGCCGCTCAGGTGGTCGAACAGTCCATTGACTAA

Upstream 100 bases:

>100_bases
TATGCCGGTACGTGCCGATCTATGCCAGCATGTCACCTCATGTGATGATAATAAAGGACCATAGAAGAATCGTGAACCAT
TCCAACCAAACGAGGCGCAC

Downstream 100 bases:

>100_bases
CGTGATAAACATCACAGTTTGTTTGGGAGCGCTAACAACCGTTGAGAACATTACCATACCGTTATCAAACAGGGTGGTGC
GCTGGTAGCAAAACGTCTTA

Product: small GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MTDNTQYTDIDRGNNDVTPEGVLAGQSEVLLDDSQRATGWHEDANQEWEEREARNELKHVAGLGELQDVTEVEYRKVRLE
RVVLVGVWSSAVTTQAKAEESLRELAALAETAGAVVCDGLLQHRSKPDAATYVGSGKAKEIADIVAREEADTIIVDDDLP
PSQRRALEDAAKVKVVDRTAVILDIFAQHATSREGKAQVELAQLEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGE
TKIEMDRRVIRTRIARLRRQIREMAPAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELVENALFATLDTAVR
RAKTRDGRAYAYVDTVGFVRRLPTQLVEAFKSTLEEVAEADVILHVVDGSHPDPFSQVDAVNDVLADIEGTASIPRILVF
NKADQADETTRERLAALQPDAFIVSAYTGEGLDELRTAVESLLPVPHVHVNALLPYTAGSLISRVREYGKVDKVEYRDDG
ILLEADVDAHLAAQVVEQSID

Sequences:

>Translated_501_residues
MTDNTQYTDIDRGNNDVTPEGVLAGQSEVLLDDSQRATGWHEDANQEWEEREARNELKHVAGLGELQDVTEVEYRKVRLE
RVVLVGVWSSAVTTQAKAEESLRELAALAETAGAVVCDGLLQHRSKPDAATYVGSGKAKEIADIVAREEADTIIVDDDLP
PSQRRALEDAAKVKVVDRTAVILDIFAQHATSREGKAQVELAQLEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGE
TKIEMDRRVIRTRIARLRRQIREMAPAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELVENALFATLDTAVR
RAKTRDGRAYAYVDTVGFVRRLPTQLVEAFKSTLEEVAEADVILHVVDGSHPDPFSQVDAVNDVLADIEGTASIPRILVF
NKADQADETTRERLAALQPDAFIVSAYTGEGLDELRTAVESLLPVPHVHVNALLPYTAGSLISRVREYGKVDKVEYRDDG
ILLEADVDAHLAAQVVEQSID
>Mature_500_residues
TDNTQYTDIDRGNNDVTPEGVLAGQSEVLLDDSQRATGWHEDANQEWEEREARNELKHVAGLGELQDVTEVEYRKVRLER
VVLVGVWSSAVTTQAKAEESLRELAALAETAGAVVCDGLLQHRSKPDAATYVGSGKAKEIADIVAREEADTIIVDDDLPP
SQRRALEDAAKVKVVDRTAVILDIFAQHATSREGKAQVELAQLEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGET
KIEMDRRVIRTRIARLRRQIREMAPAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELVENALFATLDTAVRR
AKTRDGRAYAYVDTVGFVRRLPTQLVEAFKSTLEEVAEADVILHVVDGSHPDPFSQVDAVNDVLADIEGTASIPRILVFN
KADQADETTRERLAALQPDAFIVSAYTGEGLDELRTAVESLLPVPHVHVNALLPYTAGSLISRVREYGKVDKVEYRDDGI
LLEADVDAHLAAQVVEQSID

Specific function: Unknown

COG id: COG2262

COG function: function code R; GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI310133116, Length=216, Percent_Identity=35.1851851851852, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI310133118, Length=216, Percent_Identity=35.1851851851852, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI310124269, Length=208, Percent_Identity=35.0961538461538, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI310124267, Length=208, Percent_Identity=35.0961538461538, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI310124171, Length=208, Percent_Identity=35.0961538461538, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI310124169, Length=208, Percent_Identity=35.0961538461538, Blast_Score=121, Evalue=2e-27,
Organism=Escherichia coli, GI1790615, Length=404, Percent_Identity=40.3465346534653, Blast_Score=254, Evalue=1e-68,
Organism=Caenorhabditis elegans, GI17561038, Length=289, Percent_Identity=33.2179930795848, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24650079, Length=290, Percent_Identity=36.2068965517241, Blast_Score=133, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016496
- InterPro:   IPR006073
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 54712; Mature: 54581

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNTQYTDIDRGNNDVTPEGVLAGQSEVLLDDSQRATGWHEDANQEWEEREARNELKHV
CCCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AGLGELQDVTEVEYRKVRLERVVLVGVWSSAVTTQAKAEESLRELAALAETAGAVVCDGL
HCCCHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQHRSKPDAATYVGSGKAKEIADIVAREEADTIIVDDDLPPSQRRALEDAAKVKVVDRTA
HHHCCCCCHHHEECCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHEEEHHHHH
VILDIFAQHATSREGKAQVELAQLEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
TKIEMDRRVIRTRIARLRRQIREMAPAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRL
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHC
TGSAELVENALFATLDTAVRRAKTRDGRAYAYVDTVGFVRRLPTQLVEAFKSTLEEVAEA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVILHVVDGSHPDPFSQVDAVNDVLADIEGTASIPRILVFNKADQADETTRERLAALQPD
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCC
AFIVSAYTGEGLDELRTAVESLLPVPHVHVNALLPYTAGSLISRVREYGKVDKVEYRDDG
CEEEEECCCCCHHHHHHHHHHHCCCCCEEEHEECCHHHHHHHHHHHHHCCCCCEEECCCC
ILLEADVDAHLAAQVVEQSID
EEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TDNTQYTDIDRGNNDVTPEGVLAGQSEVLLDDSQRATGWHEDANQEWEEREARNELKHV
CCCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AGLGELQDVTEVEYRKVRLERVVLVGVWSSAVTTQAKAEESLRELAALAETAGAVVCDGL
HCCCHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQHRSKPDAATYVGSGKAKEIADIVAREEADTIIVDDDLPPSQRRALEDAAKVKVVDRTA
HHHCCCCCHHHEECCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHEEEHHHHH
VILDIFAQHATSREGKAQVELAQLEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCC
TKIEMDRRVIRTRIARLRRQIREMAPAREVKRGSRRRFGLPTVAVVGYTNAGKSSLTNRL
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHC
TGSAELVENALFATLDTAVRRAKTRDGRAYAYVDTVGFVRRLPTQLVEAFKSTLEEVAEA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVILHVVDGSHPDPFSQVDAVNDVLADIEGTASIPRILVFNKADQADETTRERLAALQPD
CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCC
AFIVSAYTGEGLDELRTAVESLLPVPHVHVNALLPYTAGSLISRVREYGKVDKVEYRDDG
CEEEEECCCCCHHHHHHHHHHHCCCCCEEEHEECCHHHHHHHHHHHHHCCCCCEEECCCC
ILLEADVDAHLAAQVVEQSID
EEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]