| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is hisD [H]
Identifier: 213691718
GI number: 213691718
Start: 969557
End: 970954
Strand: Direct
Name: hisD [H]
Synonym: Blon_0823
Alternate gene names: 213691718
Gene position: 969557-970954 (Clockwise)
Preceding gene: 213691717
Following gene: 213691719
Centisome position: 34.23
GC content: 66.24
Gene sequence:
>1398_bases ATGAGTGAGAACATCATGCGAATCATTGACCTGCGTGGTCAGCACCTGTCCCGTGCCGAACTGCTCGCCGCGATGCCGCG CGCCGCAATGGGCACTTCCGAAGCCACCGATCTGGTGCGTCCGATTCTGGACGATGTCAAGGAACGCGGTGCCGCGGCCC TGCGCGACTTCGAGGAGAAGTTCGATCACGTGCGTCCCAAGAACCTGCGCGTGCCGGTCGAGGCGATCAAGGACGCCCTG ACCACGCTCGACCCCGAAGTGCGCGCTGCCATCGAGGAATCGGTACGCCGCGCCCGCGCCGTGGCCGCCAACCAGGTGCC GAAGGACTTCTACACCGACCTCGCCGAAGGTGCCCGCGTGGCCGAACGCTGGATTCCGATTCAGCGCGTCGGCCTGTATG TGCCCGGCGGCAAGGCCGTCTACCCGAGCTCCGTCATCATGAACGCTGTGCCGGCCCAGGCCGCCGGCGTCGAATCGCTG GCCATCGCCACCCCGCCCGCCCGCGACAATGAGGAAGGCCTGCCGAACAAGACCATCCTCGCCACCTGCGCCATCCTCGG TGTTGACGAGGTATACGCGGTCGGCGGCGCTCAGGCCATCGCCATGTTCGCATACGGCGCCAAGGGCAGCGAGCCACAGG ACGGCGACATCCTGTGCGATCCGGTTGACAAGATCACCGGCCCGGGCAACATCTTCGTGGCCACCGCCAAGTCGCTGGTC TCCGCATTCGTGGGCATCGACGCGGTCGCCGGCCCCACCGAAATCGGCATCATCGCCGATGCAACCGCCAACCCGAGTCT GCTGGCCGCCGACCTCATCGGCCAGGCCGAGCATGATGAGCTCGCCGGTTCCGTGCTGTTCACCGACTCCACCGAGATTG CCGACAAGGTGCAGGAGAACCTCAAGTACCGCGTGCCGCGTACCGAGCACGCCGAGCGTGTCCACACGTCACTGTCCGGC ACCCAGTCTGCCATCGTGCTGACCGACGGTCTCGACCAGTCCATCGACGCGGCCAACGCCTACGCCGCCGAACACCTTGA GATTCAGACCAAGGATGCCGATGCTGTCGTCAAGCGCATCAAGAACGCCGGTGCCATCTTCCGCGGCCCGTACTCCCCGG TGCCGCTGGGCGACTACATGTCCGGCTCCAACCACGTGCTGCCCACCGGCGGCACCGCCCGCTTCGCCGCCGGCCTCGGC GTGCACACCTTCATGAAGCCGGTCGAAGTCATCGAATACGACGAGGAAGGCCTGAAGGCACTCGCCGCCCGCATCAACGC CTTTGCGGTGTCCGAGGATCTGCCCGCCCACGGCGAGTGCGTGCTCTCCCGCTTCGTCAAGGATCCGTATGACAAGGCCA CCCTGCGCGAGCAGGAGAAGGGAGCCGGTCTGCGATGA
Upstream 100 bases:
>100_bases CTGCATCACGAATCCACATCACGCACGATAATCTCACGATACGGGTGAACATGGGCGTTCCTCGCCGCTTAGGCCCCTCA CGTTGGTACGATGGGGCTTT
Downstream 100 bases:
>100_bases GCTCGATTCCCGCAAACCTGCCGTTGCGCAACGACCTGATCGGTGAGGAGCCGTACGGCGCTCCCCAGCTGGACGTGCCG GTGTGCCTGAACGTCAACGA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MSENIMRIIDLRGQHLSRAELLAAMPRAAMGTSEATDLVRPILDDVKERGAAALRDFEEKFDHVRPKNLRVPVEAIKDAL TTLDPEVRAAIEESVRRARAVAANQVPKDFYTDLAEGARVAERWIPIQRVGLYVPGGKAVYPSSVIMNAVPAQAAGVESL AIATPPARDNEEGLPNKTILATCAILGVDEVYAVGGAQAIAMFAYGAKGSEPQDGDILCDPVDKITGPGNIFVATAKSLV SAFVGIDAVAGPTEIGIIADATANPSLLAADLIGQAEHDELAGSVLFTDSTEIADKVQENLKYRVPRTEHAERVHTSLSG TQSAIVLTDGLDQSIDAANAYAAEHLEIQTKDADAVVKRIKNAGAIFRGPYSPVPLGDYMSGSNHVLPTGGTARFAAGLG VHTFMKPVEVIEYDEEGLKALAARINAFAVSEDLPAHGECVLSRFVKDPYDKATLREQEKGAGLR
Sequences:
>Translated_465_residues MSENIMRIIDLRGQHLSRAELLAAMPRAAMGTSEATDLVRPILDDVKERGAAALRDFEEKFDHVRPKNLRVPVEAIKDAL TTLDPEVRAAIEESVRRARAVAANQVPKDFYTDLAEGARVAERWIPIQRVGLYVPGGKAVYPSSVIMNAVPAQAAGVESL AIATPPARDNEEGLPNKTILATCAILGVDEVYAVGGAQAIAMFAYGAKGSEPQDGDILCDPVDKITGPGNIFVATAKSLV SAFVGIDAVAGPTEIGIIADATANPSLLAADLIGQAEHDELAGSVLFTDSTEIADKVQENLKYRVPRTEHAERVHTSLSG TQSAIVLTDGLDQSIDAANAYAAEHLEIQTKDADAVVKRIKNAGAIFRGPYSPVPLGDYMSGSNHVLPTGGTARFAAGLG VHTFMKPVEVIEYDEEGLKALAARINAFAVSEDLPAHGECVLSRFVKDPYDKATLREQEKGAGLR >Mature_464_residues SENIMRIIDLRGQHLSRAELLAAMPRAAMGTSEATDLVRPILDDVKERGAAALRDFEEKFDHVRPKNLRVPVEAIKDALT TLDPEVRAAIEESVRRARAVAANQVPKDFYTDLAEGARVAERWIPIQRVGLYVPGGKAVYPSSVIMNAVPAQAAGVESLA IATPPARDNEEGLPNKTILATCAILGVDEVYAVGGAQAIAMFAYGAKGSEPQDGDILCDPVDKITGPGNIFVATAKSLVS AFVGIDAVAGPTEIGIIADATANPSLLAADLIGQAEHDELAGSVLFTDSTEIADKVQENLKYRVPRTEHAERVHTSLSGT QSAIVLTDGLDQSIDAANAYAAEHLEIQTKDADAVVKRIKNAGAIFRGPYSPVPLGDYMSGSNHVLPTGGTARFAAGLGV HTFMKPVEVIEYDEEGLKALAARINAFAVSEDLPAHGECVLSRFVKDPYDKATLREQEKGAGLR
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=422, Percent_Identity=37.6777251184834, Blast_Score=246, Evalue=3e-66, Organism=Saccharomyces cerevisiae, GI6319819, Length=435, Percent_Identity=34.2528735632184, Blast_Score=232, Evalue=8e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 49434; Mature: 49303
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENIMRIIDLRGQHLSRAELLAAMPRAAMGTSEATDLVRPILDDVKERGAAALRDFEEK CCCCHHHHHHCCCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDHVRPKNLRVPVEAIKDALTTLDPEVRAAIEESVRRARAVAANQVPKDFYTDLAEGARV HHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AERWIPIQRVGLYVPGGKAVYPSSVIMNAVPAQAAGVESLAIATPPARDNEEGLPNKTIL HHHCCCHHHEEEEECCCCCCCCHHHHHHCCCCHHCCCCCEEEECCCCCCCCCCCCCHHHH ATCAILGVDEVYAVGGAQAIAMFAYGAKGSEPQDGDILCDPVDKITGPGNIFVATAKSLV HHHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCCCEEECCHHHCCCCCCEEEEEHHHHH SAFVGIDAVAGPTEIGIIADATANPSLLAADLIGQAEHDELAGSVLFTDSTEIADKVQEN HHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHCCEEEEECCHHHHHHHHHH LKYRVPRTEHAERVHTSLSGTQSAIVLTDGLDQSIDAANAYAAEHLEIQTKDADAVVKRI HEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHEEEECCCHHHHHHHH KNAGAIFRGPYSPVPLGDYMSGSNHVLPTGGTARFAAGLGVHTFMKPVEVIEYDEEGLKA HHCCCEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCHHHHHHHHHHHHCCHHHHHH LAARINAFAVSEDLPAHGECVLSRFVKDPYDKATLREQEKGAGLR HHHHHHHHEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCC >Mature Secondary Structure SENIMRIIDLRGQHLSRAELLAAMPRAAMGTSEATDLVRPILDDVKERGAAALRDFEEK CCCHHHHHHCCCCCCHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FDHVRPKNLRVPVEAIKDALTTLDPEVRAAIEESVRRARAVAANQVPKDFYTDLAEGARV HHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AERWIPIQRVGLYVPGGKAVYPSSVIMNAVPAQAAGVESLAIATPPARDNEEGLPNKTIL HHHCCCHHHEEEEECCCCCCCCHHHHHHCCCCHHCCCCCEEEECCCCCCCCCCCCCHHHH ATCAILGVDEVYAVGGAQAIAMFAYGAKGSEPQDGDILCDPVDKITGPGNIFVATAKSLV HHHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCCCEEECCHHHCCCCCCEEEEEHHHHH SAFVGIDAVAGPTEIGIIADATANPSLLAADLIGQAEHDELAGSVLFTDSTEIADKVQEN HHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCCHHHHCCEEEEECCHHHHHHHHHH LKYRVPRTEHAERVHTSLSGTQSAIVLTDGLDQSIDAANAYAAEHLEIQTKDADAVVKRI HEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHEEEECCCHHHHHHHH KNAGAIFRGPYSPVPLGDYMSGSNHVLPTGGTARFAAGLGVHTFMKPVEVIEYDEEGLKA HHCCCEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCHHHHHHHHHHHHCCHHHHHH LAARINAFAVSEDLPAHGECVLSRFVKDPYDKATLREQEKGAGLR HHHHHHHHEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12381787 [H]