| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is murI [H]
Identifier: 213691663
GI number: 213691663
Start: 889792
End: 890586
Strand: Reverse
Name: murI [H]
Synonym: Blon_0768
Alternate gene names: 213691663
Gene position: 890586-889792 (Counterclockwise)
Preceding gene: 213691665
Following gene: 213691662
Centisome position: 31.44
GC content: 58.99
Gene sequence:
>795_bases ATGAGCTCTTCGGCTCCAATCGGCGTATTCGATTCGGGTCTTGGCGGTATTTCCGTGGCTCGCCAAATCGCCAAGGATAT GCCGGCCGAGCATGTGCTGTATTTTGGCGATTCGGCCAACGCCCCGTACGGCATCAAGACGCCTGAGCAGGTGAGGGCCC TGAGTTTCGATATCGTCGAACGGTTCGTGCGTCAAGGCGTCAAGGCCGTGGTCATCGCCTGCAATACCGCCACTTCCGCC GCGGTGAACGATTTGCGCGAACACTACGATATTCCGATCATCGGCATGGAGCCGGCCCTGAAAGTGGCGTGCGACCGTGG TGACGTGCCTTCCGACCCGCATCATATTCCTCAGAGAGTGATTGTGGCGGCCACTCCCCTGACCTTGCGTGAGCGGAAGT TCGCCACACTCATGGATCGATTCGACTCGCAGAACACCATTTTCAAGGAGCCTTGCCCCGACTTGGTGGAGATTGTGGAG TCCGGGCGGCTCGGCGACCATGATCTGGTGATGCGCACGCTGCACGGCTACTTCGATCAATATGACATGGAGCACATCGA CTCGGTGGTGTTGGGTTGCACGCATTTCGTGTTTTACCGCGACTACTTCCGCGAGCTGCTGCCTGAACGGGCCGCCGTCA TCGATGGCAATGAGGGCACCGTGCGCCACCTGGGCGTGGTGTTGGAATCTCTGGGCAAGCTGGCGCCCGAAGGCGCTACC GGCGGCGTGGAGCTTGCCAATTCCGATCCGTCCGAACGGATTGCCGAGTTATCACGCAAATTGTTGAACGTATGA
Upstream 100 bases:
>100_bases AGAGTACTCTAGGGAGCGAAACAACACCGCTGAAAATCGGCTTTATGTTCGGTTCGCGGCAACATACGGTTGCAGGCATG GCTATAGGGAGGATTCAGGC
Downstream 100 bases:
>100_bases GCCAAGAAAGAACCAGACAAATTCACGGCACACTGCCCATATCGCTGTCCGCGCAGCGCGCGTAAGCTCATACCAAATTC AAGTGAACAGGGGGTTGGTA
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSSSAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRALSFDIVERFVRQGVKAVVIACNTATSA AVNDLREHYDIPIIGMEPALKVACDRGDVPSDPHHIPQRVIVAATPLTLRERKFATLMDRFDSQNTIFKEPCPDLVEIVE SGRLGDHDLVMRTLHGYFDQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPEGAT GGVELANSDPSERIAELSRKLLNV
Sequences:
>Translated_264_residues MSSSAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRALSFDIVERFVRQGVKAVVIACNTATSA AVNDLREHYDIPIIGMEPALKVACDRGDVPSDPHHIPQRVIVAATPLTLRERKFATLMDRFDSQNTIFKEPCPDLVEIVE SGRLGDHDLVMRTLHGYFDQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPEGAT GGVELANSDPSERIAELSRKLLNV >Mature_263_residues SSSAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRALSFDIVERFVRQGVKAVVIACNTATSAA VNDLREHYDIPIIGMEPALKVACDRGDVPSDPHHIPQRVIVAATPLTLRERKFATLMDRFDSQNTIFKEPCPDLVEIVES GRLGDHDLVMRTLHGYFDQYDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPEGATG GVELANSDPSERIAELSRKLLNV
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=228, Percent_Identity=31.140350877193, Blast_Score=89, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 28972; Mature: 28841
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00923 ASP_GLU_RACEMASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRALSFDIVE CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHH RFVRQGVKAVVIACNTATSAAVNDLREHYDIPIIGMEPALKVACDRGDVPSDPHHIPQRV HHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCCCHHHHEECCCCCCCCCCHHCHHE IVAATPLTLRERKFATLMDRFDSQNTIFKEPCPDLVEIVESGRLGDHDLVMRTLHGYFDQ EEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH YDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPEGAT HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCCCC GGVELANSDPSERIAELSRKLLNV CCEEECCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SSSAPIGVFDSGLGGISVARQIAKDMPAEHVLYFGDSANAPYGIKTPEQVRALSFDIVE CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHH RFVRQGVKAVVIACNTATSAAVNDLREHYDIPIIGMEPALKVACDRGDVPSDPHHIPQRV HHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCEECCCCHHHHEECCCCCCCCCCHHCHHE IVAATPLTLRERKFATLMDRFDSQNTIFKEPCPDLVEIVESGRLGDHDLVMRTLHGYFDQ EEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHH YDMEHIDSVVLGCTHFVFYRDYFRELLPERAAVIDGNEGTVRHLGVVLESLGKLAPEGAT HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCCCC GGVELANSDPSERIAELSRKLLNV CCEEECCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA