| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is glnP [H]
Identifier: 213691640
GI number: 213691640
Start: 865674
End: 866333
Strand: Direct
Name: glnP [H]
Synonym: Blon_0744
Alternate gene names: 213691640
Gene position: 865674-866333 (Clockwise)
Preceding gene: 213691638
Following gene: 213691641
Centisome position: 30.56
GC content: 56.52
Gene sequence:
>660_bases ATGACATTCGATTGGTCGTTCGTGCAGCGTTACGCGCCTTTCTTCGTCAATGGCACATTGATGACCTTATTCATATCCGT GTTTGGCATACTGCTTGCCGTCGCGGTGGGTCTGGTCTGCGCCGGCGTGGAAATCGCGCGTATCCCGGTCGCCCGGCAAA TCGTAAGAATCTATATCGAACTCAGCCGCAATACGCCATTGCTGGTACAGCTGTACTTTCTGTACTTCGGCCTGCCCAAA CTCGGCGTAGTATGGTCCGCCGAAACCTGCGCGATAGTCGGCCTCGGATTCCTGGGCGGTTCCTACATGGCCGAGGCGAT GCGCGGCGGATTGGAAGCGGTGCCCAACGTGCAGCGCGAAACCGCATACGTACTGGGACTGACCTCCACGCAAACCATCA CCCGGGTCATTCTGCCGCAGGCGGTGTCCACCGCCATTCCAGGCGTAGTGGCCAATGTGATCTTCCTGTTCAAGGAATCG AGCGTCGTCTCCGCCATTGCGCTCGCCGACGTGATGTATATGGCCAAAGATCTGATCGGCATGTACTACAGCACCTATGA GTCGCTGTTCATGCTGATTGTGGCGTATCTGGTGATTCTGCTGCCGATTTCCATCTTTGGCACATGGCTGGAGAGGAGGT TCGATTATGGACGGCGCTGA
Upstream 100 bases:
>100_bases GGTCGTGGCAGGTATGTTCGGCCCCCGAAATCGTACATGGGCGGCTAAGACCGTTTATGCGCAGGAGAAGAAACGAGAAG CAAAGGAAGGAGCGCGCCCG
Downstream 100 bases:
>100_bases AATACTGCTCCAGCCGGGCGTATTCCCACGTCTGTTGCAAGGCCTATGGGTCACCGTGTGGATAGCCGGCGTATCCGTAG GCGCGTCCATCCCGGTCGGC
Product: polar amino acid ABC transporter, inner membrane subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTFDWSFVQRYAPFFVNGTLMTLFISVFGILLAVAVGLVCAGVEIARIPVARQIVRIYIELSRNTPLLVQLYFLYFGLPK LGVVWSAETCAIVGLGFLGGSYMAEAMRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKES SVVSAIALADVMYMAKDLIGMYYSTYESLFMLIVAYLVILLPISIFGTWLERRFDYGRR
Sequences:
>Translated_219_residues MTFDWSFVQRYAPFFVNGTLMTLFISVFGILLAVAVGLVCAGVEIARIPVARQIVRIYIELSRNTPLLVQLYFLYFGLPK LGVVWSAETCAIVGLGFLGGSYMAEAMRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKES SVVSAIALADVMYMAKDLIGMYYSTYESLFMLIVAYLVILLPISIFGTWLERRFDYGRR >Mature_218_residues TFDWSFVQRYAPFFVNGTLMTLFISVFGILLAVAVGLVCAGVEIARIPVARQIVRIYIELSRNTPLLVQLYFLYFGLPKL GVVWSAETCAIVGLGFLGGSYMAEAMRGGLEAVPNVQRETAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESS VVSAIALADVMYMAKDLIGMYYSTYESLFMLIVAYLVILLPISIFGTWLERRFDYGRR
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0765
COG function: function code E; ABC-type amino acid transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788226, Length=203, Percent_Identity=30.0492610837438, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787030, Length=219, Percent_Identity=31.5068493150685, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI87082239, Length=209, Percent_Identity=33.9712918660287, Blast_Score=91, Evalue=4e-20, Organism=Escherichia coli, GI1788646, Length=223, Percent_Identity=29.5964125560538, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1786873, Length=219, Percent_Identity=26.027397260274, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786874, Length=238, Percent_Identity=28.1512605042017, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1787086, Length=185, Percent_Identity=26.4864864864865, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI48994930, Length=160, Percent_Identity=31.875, Blast_Score=67, Evalue=7e-13, Organism=Escherichia coli, GI1787087, Length=126, Percent_Identity=30.1587301587302, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1788645, Length=189, Percent_Identity=24.8677248677249, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24242; Mature: 24111
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDWSFVQRYAPFFVNGTLMTLFISVFGILLAVAVGLVCAGVEIARIPVARQIVRIYIE CCCCHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LSRNTPLLVQLYFLYFGLPKLGVVWSAETCAIVGLGFLGGSYMAEAMRGGLEAVPNVQRE HCCCCCHHHHHHHHHHCCCHHCEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHH TAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESSVVSAIALADVMYMAKDLIG HHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH MYYSTYESLFMLIVAYLVILLPISIFGTWLERRFDYGRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TFDWSFVQRYAPFFVNGTLMTLFISVFGILLAVAVGLVCAGVEIARIPVARQIVRIYIE CCCHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LSRNTPLLVQLYFLYFGLPKLGVVWSAETCAIVGLGFLGGSYMAEAMRGGLEAVPNVQRE HCCCCCHHHHHHHHHHCCCHHCEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHH TAYVLGLTSTQTITRVILPQAVSTAIPGVVANVIFLFKESSVVSAIALADVMYMAKDLIG HHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH MYYSTYESLFMLIVAYLVILLPISIFGTWLERRFDYGRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]