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The map label for this gene is dnaQ [H]

Identifier: 213691637

GI number: 213691637

Start: 861672

End: 862307

Strand: Reverse

Name: dnaQ [H]

Synonym: Blon_0741

Alternate gene names: 213691637

Gene position: 862307-861672 (Counterclockwise)

Preceding gene: 213691639

Following gene: 213691630

Centisome position: 30.44

GC content: 59.59

Gene sequence:

>636_bases
ATGGACGATGCCGTCTTCCCCACCGATTATGTGGCGCTGGATCTGGAGACCACCGGCTTTTACCCGAACAGTTGCGCCAT
CACGGAAATCGGTGCCGTGCGCGTACGGAAGGGGCATATCGTCGATCAATTCCAGCAGCTGGTGAATCCCTTGCGGCCGA
TTCCGCGTCAGATCACCACGCTGACCGGCATCACCGATGCGATGGTGGCCGACCTCGATCCGATTGACAAGGTGCTTCCC
CGATTCATCGCATGGCTCGCTACCCCGGCTGCCAGTCCCGCCGTTGAGCCGATTGTCGGTCATAACGTCAGCTTCGATCT
GCGATTCCTGGATTACAACACCCGGCATATCGCCGGCTGCGGCTTTGCCTGCGCGGATTATGACACGATGCAGATCAGCC
GCGCCCTGTTCCCCGCGCAGCGGCATCACCGTCTGGCCGACCTGATCGTACGCTTCGGCATCGCGGACAATGAGGAGCAC
CGCGCATTAAGCGATGCCATCCAAACCCAGCAGTGCTTCGAATGGATGCGGCATTATGTCACCGAGCATCACGAATCCGA
AGCGATCCGTTGGAAGCAGGCGCCGGCCAGAAACAGCACCGAAATTCTCCACCAGCAGTTGGTGGTAAAGCGGTAG

Upstream 100 bases:

>100_bases
CGAACACCGACTGATATGAGGAGCCTCCGTGACCACTTCCGGCATTACCGTTTTCGGCCAACCATCCCAGCCCAATCATG
GTGCCGGCGGGCGAATCGCC

Downstream 100 bases:

>100_bases
TTACAGCCCGTATTATTCGCACATAGAGGAAAAACTATTAGTCGCTGGGCTAGAGACCTTATAGTGGACGGATTCCTCTC
GCATATCGGAGAAATGCGGG

Product: DNA polymerase III, epsilon subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MDDAVFPTDYVALDLETTGFYPNSCAITEIGAVRVRKGHIVDQFQQLVNPLRPIPRQITTLTGITDAMVADLDPIDKVLP
RFIAWLATPAASPAVEPIVGHNVSFDLRFLDYNTRHIAGCGFACADYDTMQISRALFPAQRHHRLADLIVRFGIADNEEH
RALSDAIQTQQCFEWMRHYVTEHHESEAIRWKQAPARNSTEILHQQLVVKR

Sequences:

>Translated_211_residues
MDDAVFPTDYVALDLETTGFYPNSCAITEIGAVRVRKGHIVDQFQQLVNPLRPIPRQITTLTGITDAMVADLDPIDKVLP
RFIAWLATPAASPAVEPIVGHNVSFDLRFLDYNTRHIAGCGFACADYDTMQISRALFPAQRHHRLADLIVRFGIADNEEH
RALSDAIQTQQCFEWMRHYVTEHHESEAIRWKQAPARNSTEILHQQLVVKR
>Mature_211_residues
MDDAVFPTDYVALDLETTGFYPNSCAITEIGAVRVRKGHIVDQFQQLVNPLRPIPRQITTLTGITDAMVADLDPIDKVLP
RFIAWLATPAASPAVEPIVGHNVSFDLRFLDYNTRHIAGCGFACADYDTMQISRALFPAQRHHRLADLIVRFGIADNEEH
RALSDAIQTQQCFEWMRHYVTEHHESEAIRWKQAPARNSTEILHQQLVVKR

Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease [H]

COG id: COG2176

COG function: function code L; DNA polymerase III, alpha subunit (gram-positive type)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006054
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 23929; Mature: 23929

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDAVFPTDYVALDLETTGFYPNSCAITEIGAVRVRKGHIVDQFQQLVNPLRPIPRQITT
CCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCEEEECCHHHHHHHHHHHHHCCCHHHHHH
LTGITDAMVADLDPIDKVLPRFIAWLATPAASPAVEPIVGHNVSFDLRFLDYNTRHIAGC
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEEECCCCEECCC
GFACADYDTMQISRALFPAQRHHRLADLIVRFGIADNEEHRALSDAIQTQQCFEWMRHYV
CCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TEHHESEAIRWKQAPARNSTEILHQQLVVKR
HHHCCHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDDAVFPTDYVALDLETTGFYPNSCAITEIGAVRVRKGHIVDQFQQLVNPLRPIPRQITT
CCCCCCCCCEEEEEEECCCCCCCCCCHHHHCCEEEECCHHHHHHHHHHHHHCCCHHHHHH
LTGITDAMVADLDPIDKVLPRFIAWLATPAASPAVEPIVGHNVSFDLRFLDYNTRHIAGC
HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEEECCCCEECCC
GFACADYDTMQISRALFPAQRHHRLADLIVRFGIADNEEHRALSDAIQTQQCFEWMRHYV
CCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TEHHESEAIRWKQAPARNSTEILHQQLVVKR
HHHCCHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]