| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is mrp [H]
Identifier: 213691627
GI number: 213691627
Start: 848471
End: 849589
Strand: Direct
Name: mrp [H]
Synonym: Blon_0731
Alternate gene names: 213691627
Gene position: 848471-849589 (Clockwise)
Preceding gene: 213691626
Following gene: 213691628
Centisome position: 29.95
GC content: 64.88
Gene sequence:
>1119_bases ATGAGCGACGCACGTCAGATCGAAGCCGACATCTACGAACGCCTGAGCAAGGTCATCGACCCCGAGCTCGGTCGTTCGGT CACCGACCTCGGCATGATCGCCGCCATCGAAGCCGCGCCCGCATCGTCGGACGCCGGCACTTACGACATCACCGTGCACG TTGAGCTGACGGTTCCCGGATGCCCACTGAGCGAGACCATCACCAACCAGATCAATGGCGCGGTCAGCTCCTATCCGGGC GCACAGCTGCTGCCTCATATCGAAGTCGGTTCGATGAGCCGTGACAAGCTGGCCGATCTGGTCGCCAACCTCAAGGCCGA ACGCAAGCGGAACCCCTTCAGCAAACCGGGTGTCAAGACCCGCATCTTCGCCATCGCCTCCGGTAAGGGCGGCGTCGGCA AGTCCTCGGTTACCGCGAACCTGGCCGCCACGTTTGCGGCCCTCGGCTTCGACACGGCCGTCATCGACGCGGACATTTAC GGCTTCTCACTGCCGCGCCTGTTCGGCGTGCATACACAGCCCACCAATCTGAATGGCATGCTCATGCCGGTCACCGCGTG GGGCGTGAAACTGATCTCCATCGGCATGTTCGCCGGTGCTGACCGGGCGATTCTGTGGCGCGGGCCGCGACTGCAGCGCT CCTTGGAACAGTTCCTGTCTGACGTATGGTGGGGCGAGCCGGACGTCCTCTTGCTCGACTTGGCTCCCGGCACCGGCGAC ATGGCGATTTCCGTGGCCCAGGCGCTGCCCAACGCCGAACTCGTGGTGGTCACCACCCCGCAGCCCTCCGCCTCTGACAT CGCCGTGCGCTCCGGACTCGTGGCCCTGCAGGTGCCGATGAAGGTGCGTGGCGTGGTGGAGAACATGAGCTACTACGAGC ACAAGGGCGAGAAGCTGGAGATTTTCGGTGCCGGCGGCGGTCAGCGCGTGTCTGAACAGTTAAGCGCGGCGCTTGGCTAT GACGTGCCGCTGATGGCCCAACTGCCGCTGGATCCCGAAGTGCGCGAGACCGGCGAGGCGGGTCGTCCCGCGGTGCTGGA TGTCGATGGCGCCTTGCGCACGGATGGCGTCGGTCAGGTCTTTCGGGGACTGGCCGAGCGTCTGCTGGAGCGGTGCTAA
Upstream 100 bases:
>100_bases CATCCGCAGCGCGTGCGCAGTGTGACTTACTCCACTCCCTCTGGCATGCCGCCGCATCACACGCTAGGGTAGAACAGGCC CTAAAGGAGGATACGGATTT
Downstream 100 bases:
>100_bases GGGGTGATGGTCCAGGAGCGGTGCCAATCGGCCAATAGAGAACGGTTCTCTTCGCGCCTATTCGCCGGTGTCGTACAATA TCCCCTGGCGTGCTAACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSDARQIEADIYERLSKVIDPELGRSVTDLGMIAAIEAAPASSDAGTYDITVHVELTVPGCPLSETITNQINGAVSSYPG AQLLPHIEVGSMSRDKLADLVANLKAERKRNPFSKPGVKTRIFAIASGKGGVGKSSVTANLAATFAALGFDTAVIDADIY GFSLPRLFGVHTQPTNLNGMLMPVTAWGVKLISIGMFAGADRAILWRGPRLQRSLEQFLSDVWWGEPDVLLLDLAPGTGD MAISVAQALPNAELVVVTTPQPSASDIAVRSGLVALQVPMKVRGVVENMSYYEHKGEKLEIFGAGGGQRVSEQLSAALGY DVPLMAQLPLDPEVRETGEAGRPAVLDVDGALRTDGVGQVFRGLAERLLERC
Sequences:
>Translated_372_residues MSDARQIEADIYERLSKVIDPELGRSVTDLGMIAAIEAAPASSDAGTYDITVHVELTVPGCPLSETITNQINGAVSSYPG AQLLPHIEVGSMSRDKLADLVANLKAERKRNPFSKPGVKTRIFAIASGKGGVGKSSVTANLAATFAALGFDTAVIDADIY GFSLPRLFGVHTQPTNLNGMLMPVTAWGVKLISIGMFAGADRAILWRGPRLQRSLEQFLSDVWWGEPDVLLLDLAPGTGD MAISVAQALPNAELVVVTTPQPSASDIAVRSGLVALQVPMKVRGVVENMSYYEHKGEKLEIFGAGGGQRVSEQLSAALGY DVPLMAQLPLDPEVRETGEAGRPAVLDVDGALRTDGVGQVFRGLAERLLERC >Mature_371_residues SDARQIEADIYERLSKVIDPELGRSVTDLGMIAAIEAAPASSDAGTYDITVHVELTVPGCPLSETITNQINGAVSSYPGA QLLPHIEVGSMSRDKLADLVANLKAERKRNPFSKPGVKTRIFAIASGKGGVGKSSVTANLAATFAALGFDTAVIDADIYG FSLPRLFGVHTQPTNLNGMLMPVTAWGVKLISIGMFAGADRAILWRGPRLQRSLEQFLSDVWWGEPDVLLLDLAPGTGDM AISVAQALPNAELVVVTTPQPSASDIAVRSGLVALQVPMKVRGVVENMSYYEHKGEKLEIFGAGGGQRVSEQLSAALGYD VPLMAQLPLDPEVRETGEAGRPAVLDVDGALRTDGVGQVFRGLAERLLERC
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=242, Percent_Identity=34.7107438016529, Blast_Score=128, Evalue=7e-30, Organism=Homo sapiens, GI6912540, Length=255, Percent_Identity=33.7254901960784, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI118572611, Length=271, Percent_Identity=32.1033210332103, Blast_Score=120, Evalue=1e-27, Organism=Escherichia coli, GI87082045, Length=330, Percent_Identity=37.2727272727273, Blast_Score=164, Evalue=8e-42, Organism=Caenorhabditis elegans, GI25143050, Length=245, Percent_Identity=36.734693877551, Blast_Score=107, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6322188, Length=268, Percent_Identity=36.5671641791045, Blast_Score=155, Evalue=9e-39, Organism=Saccharomyces cerevisiae, GI6321347, Length=269, Percent_Identity=33.0855018587361, Blast_Score=98, Evalue=3e-21, Organism=Drosophila melanogaster, GI221511043, Length=259, Percent_Identity=31.6602316602317, Blast_Score=145, Evalue=4e-35, Organism=Drosophila melanogaster, GI24667611, Length=224, Percent_Identity=32.5892857142857, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI19921440, Length=239, Percent_Identity=39.7489539748954, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 39475; Mature: 39343
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDARQIEADIYERLSKVIDPELGRSVTDLGMIAAIEAAPASSDAGTYDITVHVELTVPG CCCHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHEEEECCCCCCCCCEEEEEEEEEEEECC CPLSETITNQINGAVSSYPGAQLLPHIEVGSMSRDKLADLVANLKAERKRNPFSKPGVKT CCCHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCE RIFAIASGKGGVGKSSVTANLAATFAALGFDTAVIDADIYGFSLPRLFGVHTQPTNLNGM EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCE LMPVTAWGVKLISIGMFAGADRAILWRGPRLQRSLEQFLSDVWWGEPDVLLLDLAPGTGD EEEHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH MAISVAQALPNAELVVVTTPQPSASDIAVRSGLVALQVPMKVRGVVENMSYYEHKGEKLE HHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCEEE IFGAGGGQRVSEQLSAALGYDVPLMAQLPLDPEVRETGEAGRPAVLDVDGALRTDGVGQV EEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCCCCEEEECCCCCCCCCHHHH FRGLAERLLERC HHHHHHHHHHHC >Mature Secondary Structure SDARQIEADIYERLSKVIDPELGRSVTDLGMIAAIEAAPASSDAGTYDITVHVELTVPG CCHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHEEEECCCCCCCCCEEEEEEEEEEEECC CPLSETITNQINGAVSSYPGAQLLPHIEVGSMSRDKLADLVANLKAERKRNPFSKPGVKT CCCHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCE RIFAIASGKGGVGKSSVTANLAATFAALGFDTAVIDADIYGFSLPRLFGVHTQPTNLNGM EEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCCCCCCCCCE LMPVTAWGVKLISIGMFAGADRAILWRGPRLQRSLEQFLSDVWWGEPDVLLLDLAPGTGD EEEHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCH MAISVAQALPNAELVVVTTPQPSASDIAVRSGLVALQVPMKVRGVVENMSYYEHKGEKLE HHHHHHHHCCCCCEEEEECCCCCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCEEE IFGAGGGQRVSEQLSAALGYDVPLMAQLPLDPEVRETGEAGRPAVLDVDGALRTDGVGQV EEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHCCCCCCCEEEECCCCCCCCCHHHH FRGLAERLLERC HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]