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The map label for this gene is ybhF [C]

Identifier: 213691623

GI number: 213691623

Start: 838716

End: 839501

Strand: Direct

Name: ybhF [C]

Synonym: Blon_0727

Alternate gene names: 213691623

Gene position: 838716-839501 (Clockwise)

Preceding gene: 213691622

Following gene: 213691625

Centisome position: 29.61

GC content: 58.02

Gene sequence:

>786_bases
ATGGGATTCTTGTTTAGACCGAAAGAACTGCCACGCCCGGCATCGCTGACGTTCACTTTGAATCAGGCCGGGCATACGTA
TGATGATGGGCACGTGGGACTTGCTCCCACGGACATCACCATCAGCGAGCGGCGGGTGGCCGTGATCGGACTGAACGGCG
CAGGCAAATCCACATTGCTGGGTCTGCTGGACGGTTCGTTGAAGGCCAACGCCGGTACGGTGACCATTGCGGGCGGTGAG
GAACGTCTTGACCCGGCTGTGAAGAAGGACGCGAAGCGCATCGATAATCTGGTCGGCAAAGTTCGCCGCGAGGAGATTCC
GAACAGTTTCTACCAAGCGGCGAATATTTCCGAGGCTGTTTCCGAAGCGCTGAAAAAGCACAAGGTGCCCGAGTCAGAAC
GTCATGCGCGCATCGGCAATCTGTTTGCGCATTTTGATCTGGCGCAGGTATCCAAGGCCAAGGCCAGCGAACTGGATTCC
GAGAAACGGCACCTGCTGGCCATTGCGGCCGCGCTGAGCTTTGAGCCGAGTGCGATTGTGGCGGATGAGCCGAGCAAGGG
ATTGGATGAGATTGGCACCGCGCATGTGGCCAAGGCGTTGTTCAGCTACAACAAGCAGGTGATTTTCGCCACGCATGACA
CGGATATGATCCGCCGGCCCGAATACGCCATCGACCGCGTACTGGTACTGGACGAGCACGCGGTCGTGTTTGACGGAGCG
CCGGCTGAGGCTGTGGCGTTTTATGAGGATCTGATTCGCCTCCGATACGAGACTAGAGCATCGTGA

Upstream 100 bases:

>100_bases
TCGAGCGTGGCATCCGCGCCGTGCTCAATACCGTCGCCGCTTTGCTGCGATAGGCCGGTGTTTGCCGTCACCGCACCTGT
ACTCCACGTACAATAGCGGC

Downstream 100 bases:

>100_bases
ACCATGCTTGAACCTGATGCCATAGCGTCGGATCGTTGACGATCATGGCGTCGTCGCGCGCCTGCACGAAGCAACCCAGC
ACGGCTATGCCCAGCGCCCA

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MGFLFRPKELPRPASLTFTLNQAGHTYDDGHVGLAPTDITISERRVAVIGLNGAGKSTLLGLLDGSLKANAGTVTIAGGE
ERLDPAVKKDAKRIDNLVGKVRREEIPNSFYQAANISEAVSEALKKHKVPESERHARIGNLFAHFDLAQVSKAKASELDS
EKRHLLAIAAALSFEPSAIVADEPSKGLDEIGTAHVAKALFSYNKQVIFATHDTDMIRRPEYAIDRVLVLDEHAVVFDGA
PAEAVAFYEDLIRLRYETRAS

Sequences:

>Translated_261_residues
MGFLFRPKELPRPASLTFTLNQAGHTYDDGHVGLAPTDITISERRVAVIGLNGAGKSTLLGLLDGSLKANAGTVTIAGGE
ERLDPAVKKDAKRIDNLVGKVRREEIPNSFYQAANISEAVSEALKKHKVPESERHARIGNLFAHFDLAQVSKAKASELDS
EKRHLLAIAAALSFEPSAIVADEPSKGLDEIGTAHVAKALFSYNKQVIFATHDTDMIRRPEYAIDRVLVLDEHAVVFDGA
PAEAVAFYEDLIRLRYETRAS
>Mature_260_residues
GFLFRPKELPRPASLTFTLNQAGHTYDDGHVGLAPTDITISERRVAVIGLNGAGKSTLLGLLDGSLKANAGTVTIAGGEE
RLDPAVKKDAKRIDNLVGKVRREEIPNSFYQAANISEAVSEALKKHKVPESERHARIGNLFAHFDLAQVSKAKASELDSE
KRHLLAIAAALSFEPSAIVADEPSKGLDEIGTAHVAKALFSYNKQVIFATHDTDMIRRPEYAIDRVLVLDEHAVVFDGAP
AEAVAFYEDLIRLRYETRAS

Specific function: Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system [H]

COG id: COG1122

COG function: function code P; ABC-type cobalt transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI87081782, Length=211, Percent_Identity=25.5924170616114, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=258, Percent_Identity=23.2558139534884, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28410; Mature: 28279

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLFRPKELPRPASLTFTLNQAGHTYDDGHVGLAPTDITISERRVAVIGLNGAGKSTLL
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCHHHHH
GLLDGSLKANAGTVTIAGGEERLDPAVKKDAKRIDNLVGKVRREEIPNSFYQAANISEAV
HHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHH
SEALKKHKVPESERHARIGNLFAHFDLAQVSKAKASELDSEKRHLLAIAAALSFEPSAIV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEE
ADEPSKGLDEIGTAHVAKALFSYNKQVIFATHDTDMIRRPEYAIDRVLVLDEHAVVFDGA
ECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCHHHCEEEEEECCEEEECCC
PAEAVAFYEDLIRLRYETRAS
CHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GFLFRPKELPRPASLTFTLNQAGHTYDDGHVGLAPTDITISERRVAVIGLNGAGKSTLL
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCHHHHH
GLLDGSLKANAGTVTIAGGEERLDPAVKKDAKRIDNLVGKVRREEIPNSFYQAANISEAV
HHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHH
SEALKKHKVPESERHARIGNLFAHFDLAQVSKAKASELDSEKRHLLAIAAALSFEPSAIV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEE
ADEPSKGLDEIGTAHVAKALFSYNKQVIFATHDTDMIRRPEYAIDRVLVLDEHAVVFDGA
ECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCHHHCEEEEEECCEEEECCC
PAEAVAFYEDLIRLRYETRAS
CHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]