| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691620
Identifier: 213691620
GI number: 213691620
Start: 835130
End: 836152
Strand: Direct
Name: 213691620
Synonym: Blon_0724
Alternate gene names: NA
Gene position: 835130-836152 (Clockwise)
Preceding gene: 213691616
Following gene: 213691621
Centisome position: 29.48
GC content: 61.19
Gene sequence:
>1023_bases ATGGGAGCCATGGCTGAAGTGAAGAAACCCAACAACACCATCGACAAGCTTGCCCTGATCGTCACCACCTACAAACGTCA GCAGCTGCTCGAGGTACTGTTCGATTCGATTCTGGCGCTTGAGCAGGCACCGTGGCGCATCGTCATCGTGGACAACGAGC AGTCCGATCAGACGGCGGACATGGTCGCTGCGTTTGCCGGCAAGGTGACCGGCCAATGGGGCACCACCGTGGCCGACCAG TCCGGCAACGAAGAACGTGTGGTCTATGCGCCGCAGACCGAGAACCTGGGTGGTGCGGGCGGTTTCTCCGCCGGCGTGGC CAAAGCCTACGAGCTGGGTGCCGCATGGTTCTGGGTGATGGACGACGATGTGGCCGTGCTGCCGGACGCCATTGCCAAGC TGTCCAAGTGGACCGACAGGCACGAGGTGATTCAGGGATCCCGATTCGATTACGATGGCGGCCCGTTCTACTGGCAGTAC GACTTCATTGTGCCGCTGGGCATTCCGAACCCGATTGCGCCCGCCGCATTCGGCCCGGCCGGGTATCGAGTGATGGACAC GCTGTGCTTCGAAGGCGGCCTGTTCAACCGCCGTGTGGTCACGGAAATCGGTCTGCCGGACCCGCGCTTCTTCATCTACT GGGATGACACGATGTATGGCTACCGCGCCAGCAAGGTCACCAACCCGATTGTGGTGCCCGACGTGATCCTGCGCCGTACG CGCGAAATCGGCAATTGGGATATCGCCGGTGTGCGCCAGCTCAACTCCACATCCGACATGAACCGGTATCACATCATGCG CAACCGCGGATACATGGCCCGGTACTTCATGACCTATGGTGACTTCCGTCCGCTGGTGTTTGGACTGGGTACCGTGCTCA CCGCGGCCAAGGAAGTCATTCGCCTGGTGATGGTGGATCGCGAGCACCTCAAGACCGGTTTGGTGCAGATTGCCAAGGGC TGGTGGGCCTCGCGCAAGCTGATGCACGACCCCACCTGGAAGCCCATGCCGTCGCTTGAGTGA
Upstream 100 bases:
>100_bases TTCCCTGAAACTGACAGGCTTATTCATACGCCATGCGCCGGACGTACGCAACCCGCGTTTCACTGTGCAGAAATTCGTCT TGTGCCGGTCAAGTGCAACA
Downstream 100 bases:
>100_bases CGGCCATGCCCCGGCCCGTCCGGCGCGTCCGCGTGATGGTCGCGTTAGACTTGGGCGAAATCGTGGATCGATGACATATA AGGAAAGGAAGTCAACGATG
Product: glycosyl transferase, family 2
Products: NA
Alternate protein names: Rhamnosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase; Group 2 Family Glycosyl Transferase; LPS Biosynthesis Related Glycosyltransferase; EpsIIG Glycosyltransferase; Glycosyl Transferase Group 2 Family; Glycosyl Transferase Family Protein; Glycosyl Transferase Group 2 Family Domain Protein
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MGAMAEVKKPNNTIDKLALIVTTYKRQQLLEVLFDSILALEQAPWRIVIVDNEQSDQTADMVAAFAGKVTGQWGTTVADQ SGNEERVVYAPQTENLGGAGGFSAGVAKAYELGAAWFWVMDDDVAVLPDAIAKLSKWTDRHEVIQGSRFDYDGGPFYWQY DFIVPLGIPNPIAPAAFGPAGYRVMDTLCFEGGLFNRRVVTEIGLPDPRFFIYWDDTMYGYRASKVTNPIVVPDVILRRT REIGNWDIAGVRQLNSTSDMNRYHIMRNRGYMARYFMTYGDFRPLVFGLGTVLTAAKEVIRLVMVDREHLKTGLVQIAKG WWASRKLMHDPTWKPMPSLE
Sequences:
>Translated_340_residues MGAMAEVKKPNNTIDKLALIVTTYKRQQLLEVLFDSILALEQAPWRIVIVDNEQSDQTADMVAAFAGKVTGQWGTTVADQ SGNEERVVYAPQTENLGGAGGFSAGVAKAYELGAAWFWVMDDDVAVLPDAIAKLSKWTDRHEVIQGSRFDYDGGPFYWQY DFIVPLGIPNPIAPAAFGPAGYRVMDTLCFEGGLFNRRVVTEIGLPDPRFFIYWDDTMYGYRASKVTNPIVVPDVILRRT REIGNWDIAGVRQLNSTSDMNRYHIMRNRGYMARYFMTYGDFRPLVFGLGTVLTAAKEVIRLVMVDREHLKTGLVQIAKG WWASRKLMHDPTWKPMPSLE >Mature_339_residues GAMAEVKKPNNTIDKLALIVTTYKRQQLLEVLFDSILALEQAPWRIVIVDNEQSDQTADMVAAFAGKVTGQWGTTVADQS GNEERVVYAPQTENLGGAGGFSAGVAKAYELGAAWFWVMDDDVAVLPDAIAKLSKWTDRHEVIQGSRFDYDGGPFYWQYD FIVPLGIPNPIAPAAFGPAGYRVMDTLCFEGGLFNRRVVTEIGLPDPRFFIYWDDTMYGYRASKVTNPIVVPDVILRRTR EIGNWDIAGVRQLNSTSDMNRYHIMRNRGYMARYFMTYGDFRPLVFGLGTVLTAAKEVIRLVMVDREHLKTGLVQIAKGW WASRKLMHDPTWKPMPSLE
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38291; Mature: 38160
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAMAEVKKPNNTIDKLALIVTTYKRQQLLEVLFDSILALEQAPWRIVIVDNEQSDQTAD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH MVAAFAGKVTGQWGTTVADQSGNEERVVYAPQTENLGGAGGFSAGVAKAYELGAAWFWVM HHHHHHHCCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEE DDDVAVLPDAIAKLSKWTDRHEVIQGSRFDYDGGPFYWQYDFIVPLGIPNPIAPAAFGPA CCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCC GYRVMDTLCFEGGLFNRRVVTEIGLPDPRFFIYWDDTMYGYRASKVTNPIVVPDVILRRT CHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEHHHCCCCEEHHHHHHHHH REIGNWDIAGVRQLNSTSDMNRYHIMRNRGYMARYFMTYGDFRPLVFGLGTVLTAAKEVI HHCCCCCCHHHHHCCCCCCCCCEEEECCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHH RLVMVDREHLKTGLVQIAKGWWASRKLMHDPTWKPMPSLE HHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCC >Mature Secondary Structure GAMAEVKKPNNTIDKLALIVTTYKRQQLLEVLFDSILALEQAPWRIVIVDNEQSDQTAD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH MVAAFAGKVTGQWGTTVADQSGNEERVVYAPQTENLGGAGGFSAGVAKAYELGAAWFWVM HHHHHHHCCCCCCCCEECCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEEEE DDDVAVLPDAIAKLSKWTDRHEVIQGSRFDYDGGPFYWQYDFIVPLGIPNPIAPAAFGPA CCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCC GYRVMDTLCFEGGLFNRRVVTEIGLPDPRFFIYWDDTMYGYRASKVTNPIVVPDVILRRT CHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCCCEEHHHCCCCEEHHHHHHHHH REIGNWDIAGVRQLNSTSDMNRYHIMRNRGYMARYFMTYGDFRPLVFGLGTVLTAAKEVI HHCCCCCCHHHHHCCCCCCCCCEEEECCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHH RLVMVDREHLKTGLVQIAKGWWASRKLMHDPTWKPMPSLE HHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA