| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691619
Identifier: 213691619
GI number: 213691619
Start: 834234
End: 834887
Strand: Reverse
Name: 213691619
Synonym: Blon_0723
Alternate gene names: NA
Gene position: 834887-834234 (Counterclockwise)
Preceding gene: 213691624
Following gene: 213691618
Centisome position: 29.47
GC content: 62.08
Gene sequence:
>654_bases ATGAGCGTATCTTCGCGTATCCGCATGCAAGTTGTTCGTTCTGTGGCGCCCGAGGCCGAGGGTTCGGCCAGCGCGTCCAC CGCCAGCACCAACGCCAAACTTGGCTCACACACCACTGGCGTGGCCGATTCCGGCCGCTGGTCCACGCGCCGTATCGCCA TGTATGCACTGTTCGTGGCGCTGGCGATGGTCACCAGCTTCATTGAATTCCCGATTACGCCGGTCACTTGGCTGAAGTAC GACCCGTCCGGCATCGTCTGCCTGATCGCCGGCTTTGCGTACGGTCCGGCCGCCGCCGCAATCGTGTCTGTGCTCGGCTT TGTGCCGCACATGTTCGCCGACCCGTGGGGTTCGCTGATGGCTGTGCTGGTGGCGCTGTTCCTGTCTGTGCCGGCCGCGT TCATCTACCGTAAGATCCGTACGCGCAAGGGTGCCGCCATCGGCATTCTGGTGGGTGCGGTGCTGGCCATCGTGGTGGCG CTGGTGGGCAACCTCATCGTCACGCCGATTTACGCGCACATGACCTACCAGGCTGTGGCCGCGATGATTCTGCCGATTCT GCTACCGTTCAACGTGGCTAAGATGGCGATTCACGCCGTGATCACCTTCCTGATCTACAAGCCGGTCTCCAACCTGCTGT CCAAGCAGCAGTGA
Upstream 100 bases:
>100_bases TAACGGGGATGGCGGGAAGCCCGCGACCCGCGCAAGCGGCTGATCCGGTGAGATTCCGGAGCCAACGGTATAGTCCGGAT GAAAGAAACGAGGGCTCATT
Downstream 100 bases:
>100_bases CTGGCCTGAGACGGGCCTATGCCCGCCACGACTAACGATCACTCAACGACCACTCAAAGAACAAGAACGCAGAACTCCGG CCTTTGCCGGGATTCTGCGT
Product: narrowly conserved hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSVSSRIRMQVVRSVAPEAEGSASASTASTNAKLGSHTTGVADSGRWSTRRIAMYALFVALAMVTSFIEFPITPVTWLKY DPSGIVCLIAGFAYGPAAAAIVSVLGFVPHMFADPWGSLMAVLVALFLSVPAAFIYRKIRTRKGAAIGILVGAVLAIVVA LVGNLIVTPIYAHMTYQAVAAMILPILLPFNVAKMAIHAVITFLIYKPVSNLLSKQQ
Sequences:
>Translated_217_residues MSVSSRIRMQVVRSVAPEAEGSASASTASTNAKLGSHTTGVADSGRWSTRRIAMYALFVALAMVTSFIEFPITPVTWLKY DPSGIVCLIAGFAYGPAAAAIVSVLGFVPHMFADPWGSLMAVLVALFLSVPAAFIYRKIRTRKGAAIGILVGAVLAIVVA LVGNLIVTPIYAHMTYQAVAAMILPILLPFNVAKMAIHAVITFLIYKPVSNLLSKQQ >Mature_216_residues SVSSRIRMQVVRSVAPEAEGSASASTASTNAKLGSHTTGVADSGRWSTRRIAMYALFVALAMVTSFIEFPITPVTWLKYD PSGIVCLIAGFAYGPAAAAIVSVLGFVPHMFADPWGSLMAVLVALFLSVPAAFIYRKIRTRKGAAIGILVGAVLAIVVAL VGNLIVTPIYAHMTYQAVAAMILPILLPFNVAKMAIHAVITFLIYKPVSNLLSKQQ
Specific function: Unknown
COG id: COG3601
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23024; Mature: 22893
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSSRIRMQVVRSVAPEAEGSASASTASTNAKLGSHTTGVADSGRWSTRRIAMYALFVA CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LAMVTSFIEFPITPVTWLKYDPSGIVCLIAGFAYGPAAAAIVSVLGFVPHMFADPWGSLM HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHH AVLVALFLSVPAAFIYRKIRTRKGAAIGILVGAVLAIVVALVGNLIVTPIYAHMTYQAVA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMILPILLPFNVAKMAIHAVITFLIYKPVSNLLSKQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SVSSRIRMQVVRSVAPEAEGSASASTASTNAKLGSHTTGVADSGRWSTRRIAMYALFVA CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LAMVTSFIEFPITPVTWLKYDPSGIVCLIAGFAYGPAAAAIVSVLGFVPHMFADPWGSLM HHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHH AVLVALFLSVPAAFIYRKIRTRKGAAIGILVGAVLAIVVALVGNLIVTPIYAHMTYQAVA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMILPILLPFNVAKMAIHAVITFLIYKPVSNLLSKQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA