| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691615
Identifier: 213691615
GI number: 213691615
Start: 830106
End: 830780
Strand: Reverse
Name: 213691615
Synonym: Blon_0719
Alternate gene names: NA
Gene position: 830780-830106 (Counterclockwise)
Preceding gene: 213691617
Following gene: 213691613
Centisome position: 29.33
GC content: 62.67
Gene sequence:
>675_bases ATGTTGTGCAGAAACGGTAAGAAGGTACTGCCGTTCCCGATTGAGAAGGGACCGATCCACATGACTGATGATCAACAACA ACCGTACGGTTCGGACAGTGTTCCACAGCCCGCACAGCCGTCGTACTGCCAAGATGCCGCACAGCAGCCGCAGGGCTATG GCGCCCCACAGCCCGCCGCATACGCTCAACCCGCCGCCGAAAGCTACGGCCAGCAGCAGCCGCAATACGGCCAGCCCGCC GGCGCATACGCTCAGCCTCAGTACGCTCAGCCTCAGTACGGCCAGCCTCAGTACGGCCAGCCCGCACAGCCCGTAGCGGG CTACGGCCAGCAGCCCGGCTATGGACAGGCCTACCAGCAGCCGAATGCCTACGCACAGCCGCAATACACCGCCGCTCCGT ATGCCGCCGCCCCGGTGTGGCAATCATCCAAGTCCAAGTTGGCTGCCGGCCTGTTGGGCATCTTCCTCGGCGGACTTGGT GTGCACAACTTCTATCTCGGCAACACCGGCAAGGCCGTGGCCCAGCTGCTGCTGACGCTTGTCGGCTGGATTCTGCTCGG ACTTGGCCCAATCGCAGCCGCCATCTGGGGCTTTGTTGAAGGCATCATCATCCTGTGCAGCAAGCCCGGCTCGCCGTGGC ATAAAGACGCCAACGGCTACGAACTATCAGACTGA
Upstream 100 bases:
>100_bases GACGGCGGCGGCGATAGTCATAATCAACCAGCTGGTCAGGAAACTTTTCATGGCCCAATCGTAGCGCGGCAGGTTCTACT ATTGTGCAAAACGTGAGATG
Downstream 100 bases:
>100_bases GACTGACCTCGGGCCACGTTCATTGGGCCTCTGATCAACCACGCCTCCGCAGGTATTATCTCGATGCCGCAGCCGCCGTG GGATGCGACACGCCGGCCGT
Product: TM2 domain containing protein+B7201
Products: NA
Alternate protein names: TM2 Domain-Containing Protein
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MLCRNGKKVLPFPIEKGPIHMTDDQQQPYGSDSVPQPAQPSYCQDAAQQPQGYGAPQPAAYAQPAAESYGQQQPQYGQPA GAYAQPQYAQPQYGQPQYGQPAQPVAGYGQQPGYGQAYQQPNAYAQPQYTAAPYAAAPVWQSSKSKLAAGLLGIFLGGLG VHNFYLGNTGKAVAQLLLTLVGWILLGLGPIAAAIWGFVEGIIILCSKPGSPWHKDANGYELSD
Sequences:
>Translated_224_residues MLCRNGKKVLPFPIEKGPIHMTDDQQQPYGSDSVPQPAQPSYCQDAAQQPQGYGAPQPAAYAQPAAESYGQQQPQYGQPA GAYAQPQYAQPQYGQPQYGQPAQPVAGYGQQPGYGQAYQQPNAYAQPQYTAAPYAAAPVWQSSKSKLAAGLLGIFLGGLG VHNFYLGNTGKAVAQLLLTLVGWILLGLGPIAAAIWGFVEGIIILCSKPGSPWHKDANGYELSD >Mature_224_residues MLCRNGKKVLPFPIEKGPIHMTDDQQQPYGSDSVPQPAQPSYCQDAAQQPQGYGAPQPAAYAQPAAESYGQQQPQYGQPA GAYAQPQYAQPQYGQPQYGQPAQPVAGYGQQPGYGQAYQQPNAYAQPQYTAAPYAAAPVWQSSKSKLAAGLLGIFLGGLG VHNFYLGNTGKAVAQLLLTLVGWILLGLGPIAAAIWGFVEGIIILCSKPGSPWHKDANGYELSD
Specific function: Unknown
COG id: COG2314
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23796; Mature: 23796
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCRNGKKVLPFPIEKGPIHMTDDQQQPYGSDSVPQPAQPSYCQDAAQQPQGYGAPQPAA CCCCCCCEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCH YAQPAAESYGQQQPQYGQPAGAYAQPQYAQPQYGQPQYGQPAQPVAGYGQQPGYGQAYQQ HCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHCC PNAYAQPQYTAAPYAAAPVWQSSKSKLAAGLLGIFLGGLGVHNFYLGNTGKAVAQLLLTL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHH VGWILLGLGPIAAAIWGFVEGIIILCSKPGSPWHKDANGYELSD HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLCRNGKKVLPFPIEKGPIHMTDDQQQPYGSDSVPQPAQPSYCQDAAQQPQGYGAPQPAA CCCCCCCEECCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCH YAQPAAESYGQQQPQYGQPAGAYAQPQYAQPQYGQPQYGQPAQPVAGYGQQPGYGQAYQQ HCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHCC PNAYAQPQYTAAPYAAAPVWQSSKSKLAAGLLGIFLGGLGVHNFYLGNTGKAVAQLLLTL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHH VGWILLGLGPIAAAIWGFVEGIIILCSKPGSPWHKDANGYELSD HHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA