| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is gluB [H]
Identifier: 213691606
GI number: 213691606
Start: 817560
End: 818399
Strand: Direct
Name: gluB [H]
Synonym: Blon_0710
Alternate gene names: 213691606
Gene position: 817560-818399 (Clockwise)
Preceding gene: 213691605
Following gene: 213691607
Centisome position: 28.86
GC content: 61.9
Gene sequence:
>840_bases ATGACATTCACCAATACGTTCAAGCGGAAGGCTTGCCGCGTGATCGCCGCGCTCGCCGCCGTGGCCTGCACAATGTCGCT GGCCGCCTGCGGCGCGGACGAAACCGGCAAGATCCGCATCGGCATCAAATTCGACCAGCCCGGCCTGGGCTTCAAGAAGT CCGGCACCTACGTGGGCTTCGACGTGGACGTGGCCAAGTACATCGCCAAGAAACTCGGCTATTCCGAAGACCAGATCATC TGGAAGGAAGCCCCCTCCAAGCAGCGTGAGGCCATGATTCAGAACGGCGACGTGGACATGATCCTCGCCACCTACTCCAT CACCGACGAGCGCAAGAAGGCAGTCTCCTTCGCCGGCCCGTACTTCGTGGCCGGACAGGATCTGCTCGTGCGCAAGGACG ACAACTCCATCAACGGCCCCGAAGACCTGAACGGTAAGCGCCTATGCTCCGTCACCGGTTCGACCTCCGCCGCCACCGTC AAGGAGAAGTTCGCCTCCGAAGTCCAGCTTATGGAACAGCCCGGTTACGCCGAATGCGCCACCGCCCTGTTCTCCGGCAT CGTGGACGCGGTAACCACCGACGACATCATCCTGGCCGGCCTGGCCTCTGCCTCGCGCGGCAAGCTCAAGGTGGTCGGCA AACCGTTCACGCAGGAACACTACGGCGTGGGCATCAAGAAGGGCGACACGCAGCTGGCCACCAAAATCAACAACGCCATC GTGGACATGATTCAGGACGGCTCGTGGGAGAACGCCATCAGCGATAACACCAAGGGCGTCGACTACACGCCCGACGTACG CTACAACCCGCCCACCCCGAACGAAGGAGAGGACCGATGA
Upstream 100 bases:
>100_bases GAGAACACGCCCGACGAGTTCTTCGAGCATCCGCAGACCGACCGTGCCAAGGACTTCCTCTCGAAGATCCTCACCCACTG AAAGACGGGTACGCAATCCA
Downstream 100 bases:
>100_bases ACGGATTCATGGAACTTCTCGGCCACTATGACGTGTTCGGCGCCTTTCTGGTCAACCTCGAGCTGACCTTGTGGTCGGCC TTGTTCTCCACGGTCATCGG
Product: extracellular solute-binding protein, family 3
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTFTNTFKRKACRVIAALAAVACTMSLAACGADETGKIRIGIKFDQPGLGFKKSGTYVGFDVDVAKYIAKKLGYSEDQII WKEAPSKQREAMIQNGDVDMILATYSITDERKKAVSFAGPYFVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATV KEKFASEVQLMEQPGYAECATALFSGIVDAVTTDDIILAGLASASRGKLKVVGKPFTQEHYGVGIKKGDTQLATKINNAI VDMIQDGSWENAISDNTKGVDYTPDVRYNPPTPNEGEDR
Sequences:
>Translated_279_residues MTFTNTFKRKACRVIAALAAVACTMSLAACGADETGKIRIGIKFDQPGLGFKKSGTYVGFDVDVAKYIAKKLGYSEDQII WKEAPSKQREAMIQNGDVDMILATYSITDERKKAVSFAGPYFVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATV KEKFASEVQLMEQPGYAECATALFSGIVDAVTTDDIILAGLASASRGKLKVVGKPFTQEHYGVGIKKGDTQLATKINNAI VDMIQDGSWENAISDNTKGVDYTPDVRYNPPTPNEGEDR >Mature_278_residues TFTNTFKRKACRVIAALAAVACTMSLAACGADETGKIRIGIKFDQPGLGFKKSGTYVGFDVDVAKYIAKKLGYSEDQIIW KEAPSKQREAMIQNGDVDMILATYSITDERKKAVSFAGPYFVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVK EKFASEVQLMEQPGYAECATALFSGIVDAVTTDDIILAGLASASRGKLKVVGKPFTQEHYGVGIKKGDTQLATKINNAIV DMIQDGSWENAISDNTKGVDYTPDVRYNPPTPNEGEDR
Specific function: Part of the binding-protein-dependent transport system for glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=236, Percent_Identity=28.8135593220339, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1788228, Length=269, Percent_Identity=28.996282527881, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788648, Length=204, Percent_Identity=26.4705882352941, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1787085, Length=251, Percent_Identity=25.4980079681275, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1788649, Length=210, Percent_Identity=24.7619047619048, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1786876, Length=202, Percent_Identity=26.2376237623762, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787088, Length=242, Percent_Identity=25.2066115702479, Blast_Score=61, Evalue=1e-10,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 30060; Mature: 29929
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFTNTFKRKACRVIAALAAVACTMSLAACGADETGKIRIGIKFDQPGLGFKKSGTYVGF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEEE DVDVAKYIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKKAVSFAGP CHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHCCC YFVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASEVQLMEQPGYAECA EEEECCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHH TALFSGIVDAVTTDDIILAGLASASRGKLKVVGKPFTQEHYGVGIKKGDTQLATKINNAI HHHHHHHHHHHCCCHHHEEECCCCCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHH VDMIQDGSWENAISDNTKGVDYTPDVRYNPPTPNEGEDR HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TFTNTFKRKACRVIAALAAVACTMSLAACGADETGKIRIGIKFDQPGLGFKKSGTYVGF CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCEEEE DVDVAKYIAKKLGYSEDQIIWKEAPSKQREAMIQNGDVDMILATYSITDERKKAVSFAGP CHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHCCCCEEEEEEEEECCHHHHHHHHHCCC YFVAGQDLLVRKDDNSINGPEDLNGKRLCSVTGSTSAATVKEKFASEVQLMEQPGYAECA EEEECCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHH TALFSGIVDAVTTDDIILAGLASASRGKLKVVGKPFTQEHYGVGIKKGDTQLATKINNAI HHHHHHHHHHHCCCHHHEEECCCCCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHH VDMIQDGSWENAISDNTKGVDYTPDVRYNPPTPNEGEDR HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7868586; 12948626 [H]