| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691579
Identifier: 213691579
GI number: 213691579
Start: 786540
End: 788087
Strand: Reverse
Name: 213691579
Synonym: Blon_0683
Alternate gene names: NA
Gene position: 788087-786540 (Counterclockwise)
Preceding gene: 213691580
Following gene: 213691578
Centisome position: 27.82
GC content: 60.47
Gene sequence:
>1548_bases ATGAGCGAGCACGATTACTGGCAGGTGGAATCGTCCGTTTACGGCGGAGTGGGATATGCGCCAGCCACTCTTGAAGAATA TGCCGCCATAGCCAAGGCTCTCGATGACGAGGCGGCAGGATTTGCGGCCATAGCCACGGCTTGGGAATCGGCCGCATTAC AGTTACAGTCACATCGGCATAGTGCGCCGATGTGCGTCACCTTGCAGTCGGGCGATCCGAGCGCCGTTGTTCCCGGCCAT GTCACTGCACCATATGCCGCGCTGGGCAATCGGTGTTATGACCATGCAACGGCATGCCAGCGGTTGAGCGATGACCTGCG TGGCGCGGCCGATCTGCTGATTCGCGCACACTCTCTGTATTCTCAGGCGGAGATGACGGCTCGGCGCATGTTTACCGAAT TATTGCAGGCCGGCACACAGGCCAAACCGGGATATGCCGCGGTGGGTGTTGCCGCTGCGGCGGCGGGCGGCTTTCTGGCC GGCTGGGCTATTGACGGCAAACCGAACCCGGCATGGATGTCCACGTTCAGCTATCCGTTCCAGGAAGGAGTGCTTAGCGG CGCGGGCGGAATCATTGGCGGCGTACCTATCGGCAAGAGCATTGCGCACACCGATGAGGTCAACAAGGCTGCGGGAAAAA TCGCCAATTTCTCCGGACCAGCGAAAGACATCATCCAAGGCAATCATCTGGAAGTACGCGAGGTGCAGGCGAATGCCGAC GTCGTCCGCGCAAGCGGATCGGTGGCCGAGTCAATGGAGAATCTGCGCAGACTCGCCGAAGAGCGGCTCGGCAAAATCGA GCTGAACAGCGGACTCGAATATGGGACCATCGCCATTCAACGCTATGAACGGGCTGATGGAACCAACTCCTGGCTGGTCA CCATCCCGGGTACCGATGGACAGCCTGACTCACCATTCGGCTGGGCGCAGAACGTGGAACTGATGAGCGCCGATCAGGAA CGCCGCAGGAAAGCGGACAGCGCTCGCATGGTTGCCGAGGCGATGCGTCAGGCAGGCATCGGCAAGGACGAGCCCGTGGC ACTGATCGGTCACTCCCAAGGTGGCATCGTTGCCGCCACGCTTGCCTCGGATTGGGCGGAGGAATATACCATCGAGCATG TGGTGACAGCCGGATCGCCGGTGGCCAATCATCCGATTCCGCAACGCACATGGGTCACCAGCGTGGAGATCGATGATGAA CTGGTCGCCGCACTGGATGGTTCCGCCAACCCGGTCACCGATAACTGGCTCACCGTACAAGGGCATGTATCGCCCGCGCC CGCGGCAACACCATCCACAGTGCATTCGGACAGCTCATGCACTCCCGGCGCGACGCCCATCACCGGTCTGACCCCATATG ACGCCGCACCCGTGGCTGGTTCGACCAACGGCAGAGAGTTGTCGCATTGGATTAAGTACCATCAGGCTGCTTATCAGAAC GCCACCGATCTCGGCTCCCCCGCCGTGCAACGCCACGAAGCGCATTTTCAGGAAGTCATCAACGGCGAACTCAAGGAAAC CCGCTACTACCAAGGCCGCATGACCTAG
Upstream 100 bases:
>100_bases CCGCCGATCTATTCCGATCGCGGCTCAGTCGCACCGCACAGTATTCGGCCAGTCTCGCGCAAGACATGGAGACCACCCAC CGATTGGCTTGGGGGTCATC
Downstream 100 bases:
>100_bases TCCGCGACCATTGCCACTGGCGAGCGAACCACCGAGTTCAGCGTTCGGCGGTTAAAAGTAAATACCACACTTGACAGAAT TGTCAAGAAAGGAGTTAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MSEHDYWQVESSVYGGVGYAPATLEEYAAIAKALDDEAAGFAAIATAWESAALQLQSHRHSAPMCVTLQSGDPSAVVPGH VTAPYAALGNRCYDHATACQRLSDDLRGAADLLIRAHSLYSQAEMTARRMFTELLQAGTQAKPGYAAVGVAAAAAGGFLA GWAIDGKPNPAWMSTFSYPFQEGVLSGAGGIIGGVPIGKSIAHTDEVNKAAGKIANFSGPAKDIIQGNHLEVREVQANAD VVRASGSVAESMENLRRLAEERLGKIELNSGLEYGTIAIQRYERADGTNSWLVTIPGTDGQPDSPFGWAQNVELMSADQE RRRKADSARMVAEAMRQAGIGKDEPVALIGHSQGGIVAATLASDWAEEYTIEHVVTAGSPVANHPIPQRTWVTSVEIDDE LVAALDGSANPVTDNWLTVQGHVSPAPAATPSTVHSDSSCTPGATPITGLTPYDAAPVAGSTNGRELSHWIKYHQAAYQN ATDLGSPAVQRHEAHFQEVINGELKETRYYQGRMT
Sequences:
>Translated_515_residues MSEHDYWQVESSVYGGVGYAPATLEEYAAIAKALDDEAAGFAAIATAWESAALQLQSHRHSAPMCVTLQSGDPSAVVPGH VTAPYAALGNRCYDHATACQRLSDDLRGAADLLIRAHSLYSQAEMTARRMFTELLQAGTQAKPGYAAVGVAAAAAGGFLA GWAIDGKPNPAWMSTFSYPFQEGVLSGAGGIIGGVPIGKSIAHTDEVNKAAGKIANFSGPAKDIIQGNHLEVREVQANAD VVRASGSVAESMENLRRLAEERLGKIELNSGLEYGTIAIQRYERADGTNSWLVTIPGTDGQPDSPFGWAQNVELMSADQE RRRKADSARMVAEAMRQAGIGKDEPVALIGHSQGGIVAATLASDWAEEYTIEHVVTAGSPVANHPIPQRTWVTSVEIDDE LVAALDGSANPVTDNWLTVQGHVSPAPAATPSTVHSDSSCTPGATPITGLTPYDAAPVAGSTNGRELSHWIKYHQAAYQN ATDLGSPAVQRHEAHFQEVINGELKETRYYQGRMT >Mature_514_residues SEHDYWQVESSVYGGVGYAPATLEEYAAIAKALDDEAAGFAAIATAWESAALQLQSHRHSAPMCVTLQSGDPSAVVPGHV TAPYAALGNRCYDHATACQRLSDDLRGAADLLIRAHSLYSQAEMTARRMFTELLQAGTQAKPGYAAVGVAAAAAGGFLAG WAIDGKPNPAWMSTFSYPFQEGVLSGAGGIIGGVPIGKSIAHTDEVNKAAGKIANFSGPAKDIIQGNHLEVREVQANADV VRASGSVAESMENLRRLAEERLGKIELNSGLEYGTIAIQRYERADGTNSWLVTIPGTDGQPDSPFGWAQNVELMSADQER RRKADSARMVAEAMRQAGIGKDEPVALIGHSQGGIVAATLASDWAEEYTIEHVVTAGSPVANHPIPQRTWVTSVEIDDEL VAALDGSANPVTDNWLTVQGHVSPAPAATPSTVHSDSSCTPGATPITGLTPYDAAPVAGSTNGRELSHWIKYHQAAYQNA TDLGSPAVQRHEAHFQEVINGELKETRYYQGRMT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54538; Mature: 54407
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHDYWQVESSVYGGVGYAPATLEEYAAIAKALDDEAAGFAAIATAWESAALQLQSHRH CCCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC SAPMCVTLQSGDPSAVVPGHVTAPYAALGNRCYDHATACQRLSDDLRGAADLLIRAHSLY CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQAEMTARRMFTELLQAGTQAKPGYAAVGVAAAAAGGFLAGWAIDGKPNPAWMSTFSYPF HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCH QEGVLSGAGGIIGGVPIGKSIAHTDEVNKAAGKIANFSGPAKDIIQGNHLEVREVQANAD HHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCC VVRASGSVAESMENLRRLAEERLGKIELNSGLEYGTIAIQRYERADGTNSWLVTIPGTDG EEECCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCCCCCEEEEECCCCC QPDSPFGWAQNVELMSADQERRRKADSARMVAEAMRQAGIGKDEPVALIGHSQGGIVAAT CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEE LASDWAEEYTIEHVVTAGSPVANHPIPQRTWVTSVEIDDELVAALDGSANPVTDNWLTVQ HHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCCEEEEE GHVSPAPAATPSTVHSDSSCTPGATPITGLTPYDAAPVAGSTNGRELSHWIKYHQAAYQN ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC ATDLGSPAVQRHEAHFQEVINGELKETRYYQGRMT CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCC >Mature Secondary Structure SEHDYWQVESSVYGGVGYAPATLEEYAAIAKALDDEAAGFAAIATAWESAALQLQSHRH CCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC SAPMCVTLQSGDPSAVVPGHVTAPYAALGNRCYDHATACQRLSDDLRGAADLLIRAHSLY CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SQAEMTARRMFTELLQAGTQAKPGYAAVGVAAAAAGGFLAGWAIDGKPNPAWMSTFSYPF HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCH QEGVLSGAGGIIGGVPIGKSIAHTDEVNKAAGKIANFSGPAKDIIQGNHLEVREVQANAD HHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEECCCCC VVRASGSVAESMENLRRLAEERLGKIELNSGLEYGTIAIQRYERADGTNSWLVTIPGTDG EEECCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCEEEEEECCCCCCCCEEEEECCCCC QPDSPFGWAQNVELMSADQERRRKADSARMVAEAMRQAGIGKDEPVALIGHSQGGIVAAT CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEE LASDWAEEYTIEHVVTAGSPVANHPIPQRTWVTSVEIDDELVAALDGSANPVTDNWLTVQ HHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCCEEEEE GHVSPAPAATPSTVHSDSSCTPGATPITGLTPYDAAPVAGSTNGRELSHWIKYHQAAYQN ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC ATDLGSPAVQRHEAHFQEVINGELKETRYYQGRMT CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA