| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691556
Identifier: 213691556
GI number: 213691556
Start: 760322
End: 761149
Strand: Direct
Name: 213691556
Synonym: Blon_0657
Alternate gene names: NA
Gene position: 760322-761149 (Clockwise)
Preceding gene: 213691555
Following gene: 213691561
Centisome position: 26.84
GC content: 50.48
Gene sequence:
>828_bases ATGCAACAAAGACTTCTCCTTATTGGTGTGGACGGAGTACGCCTTGACATTGTGCGTAAAGAAAATCACGCACCGAATAT TAATCGGATTCTCAATAATGGATCTTCGGCTGAAATGACAATGGAAGTGCCTACTATATCAGGGCCGGGATGGTCATCGA TACTTACGGGCACCACTCATGCTCAGCATGGGGTGCAGGACAACACCTTCCGTGGAAATCGTTTATACGAGTGCCCCGAT TTTCTGACACGTGCGGCTGTTGCTCATCCGATGATGAAAACGGTTGCCGCTTCAAGTTGGCCCCCATTGGTGGATCCTGC AGGTCCTGGTCCGGTTATTGCAACACGCAACGATCAGATTATCTCTTGTCATCACCGTTTGGTGGTACGCGATGGTGAGA CGTATGGGTACCGTCTTGCCGACAGTGAAATTGCACGGTTTGCGGTGATATCAATATGTAATGATCCCGCCGATGTCTCC TTCATCTATCTTGGTGAGGTGGATGAGGCTGGTCATTTGTATGGTGGTATTAGCGAGGAATACGAATCCGCGCTATCCCG TGTGGATGAGCATGTCGGTGAAATACTTGATGCAGTCGAACGTCGTTCGTCCAATTATCCGGACGAGGATTGGTTGGTGT GCATTACGACTGATCATGGACATCTTGACGAAGGTGGGCACGGCGGTGCCGATCCGGTACTACGGCGTTCCTTCTTTGGC GCATTGCGATTAGGAGCTCGCTCAAGTGATCAGTACTCGTTTGAGTCCATGCGTCCTGAACAGATTGCCGGATGGATGTT GCGACACCTTGACACACCGATTCGGTGA
Upstream 100 bases:
>100_bases ACAGCGCGAAGAGTCGAGTGTGTTGCTTAATTCCGCCTCTACCGATAAAAATCGTCACAACGAATTACGGAATCCGCGGG ATTCTGCGAAAGGACTTTCT
Downstream 100 bases:
>100_bases AAGACGGTATCGGTGACCTTATAGCGGCTGGACTTCCAGCCGCTATATTTGTTACGGTGTGTCTTGAGAAACGGGCCACT GTCTCTGTACTTCGCCTTAC
Product: type I phosphodiesterase/nucleotide pyrophosphatase
Products: NA
Alternate protein names: Nucleotide Pyrophosphatase-Like Protein; Hemopexin Repeat-Containing Protein; Nucleotide Pyrophosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Phosphodiesterase; AP Superfamily Protein
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MQQRLLLIGVDGVRLDIVRKENHAPNINRILNNGSSAEMTMEVPTISGPGWSSILTGTTHAQHGVQDNTFRGNRLYECPD FLTRAAVAHPMMKTVAASSWPPLVDPAGPGPVIATRNDQIISCHHRLVVRDGETYGYRLADSEIARFAVISICNDPADVS FIYLGEVDEAGHLYGGISEEYESALSRVDEHVGEILDAVERRSSNYPDEDWLVCITTDHGHLDEGGHGGADPVLRRSFFG ALRLGARSSDQYSFESMRPEQIAGWMLRHLDTPIR
Sequences:
>Translated_275_residues MQQRLLLIGVDGVRLDIVRKENHAPNINRILNNGSSAEMTMEVPTISGPGWSSILTGTTHAQHGVQDNTFRGNRLYECPD FLTRAAVAHPMMKTVAASSWPPLVDPAGPGPVIATRNDQIISCHHRLVVRDGETYGYRLADSEIARFAVISICNDPADVS FIYLGEVDEAGHLYGGISEEYESALSRVDEHVGEILDAVERRSSNYPDEDWLVCITTDHGHLDEGGHGGADPVLRRSFFG ALRLGARSSDQYSFESMRPEQIAGWMLRHLDTPIR >Mature_275_residues MQQRLLLIGVDGVRLDIVRKENHAPNINRILNNGSSAEMTMEVPTISGPGWSSILTGTTHAQHGVQDNTFRGNRLYECPD FLTRAAVAHPMMKTVAASSWPPLVDPAGPGPVIATRNDQIISCHHRLVVRDGETYGYRLADSEIARFAVISICNDPADVS FIYLGEVDEAGHLYGGISEEYESALSRVDEHVGEILDAVERRSSNYPDEDWLVCITTDHGHLDEGGHGGADPVLRRSFFG ALRLGARSSDQYSFESMRPEQIAGWMLRHLDTPIR
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30360; Mature: 30360
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQRLLLIGVDGVRLDIVRKENHAPNINRILNNGSSAEMTMEVPTISGPGWSSILTGTTH CCCEEEEEECCCEEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCH AQHGVQDNTFRGNRLYECPDFLTRAAVAHPMMKTVAASSWPPLVDPAGPGPVIATRNDQI HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCE ISCHHRLVVRDGETYGYRLADSEIARFAVISICNDPADVSFIYLGEVDEAGHLYGGISEE EEEEEEEEEECCCCCCEEECHHHHHHHHEEEECCCCCCEEEEEEECCCCCCCHHCCCHHH YESALSRVDEHVGEILDAVERRSSNYPDEDWLVCITTDHGHLDEGGHGGADPVLRRSFFG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHH ALRLGARSSDQYSFESMRPEQIAGWMLRHLDTPIR HHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQQRLLLIGVDGVRLDIVRKENHAPNINRILNNGSSAEMTMEVPTISGPGWSSILTGTTH CCCEEEEEECCCEEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCH AQHGVQDNTFRGNRLYECPDFLTRAAVAHPMMKTVAASSWPPLVDPAGPGPVIATRNDQI HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCE ISCHHRLVVRDGETYGYRLADSEIARFAVISICNDPADVSFIYLGEVDEAGHLYGGISEE EEEEEEEEEECCCCCCEEECHHHHHHHHEEEECCCCCCEEEEEEECCCCCCCHHCCCHHH YESALSRVDEHVGEILDAVERRSSNYPDEDWLVCITTDHGHLDEGGHGGADPVLRRSFFG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHH ALRLGARSSDQYSFESMRPEQIAGWMLRHLDTPIR HHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA