| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691554
Identifier: 213691554
GI number: 213691554
Start: 758210
End: 759136
Strand: Direct
Name: 213691554
Synonym: Blon_0655
Alternate gene names: NA
Gene position: 758210-759136 (Clockwise)
Preceding gene: 213691553
Following gene: 213691555
Centisome position: 26.77
GC content: 49.95
Gene sequence:
>927_bases ATGGCTGCAGTGACTACTGATTCGAAGGCCGTCTCGTCAGTAAAGTCGGAATCGCGGATTGGTGCCGAGACGAACCACGA TTCCGCTAGTGGTGCCAAATGTTTTGCGGGAAATGCGTTTTCCGACGTTCGACGGAACCATCCGAGGTATGTGGGGCAGA CAATAGTATTAAGCGTTTGCGCGGTGTTTTTCCTGTTACCTCTTCTCGCTTCGCTTTGGTTCGGAATCCATTTGCCCGGC ACCTTCATCACTTTTGATCCGTTGATGGAGATTGTTCACATGCCTGGTATTGGTGAGTCGATTGCTCTCAGCATTGGACT GGCCTTAATGACGTGTCTGCTTTCTTTGGTGCTTATGTTGCCAACTTTGTTAATTTTACATTTAAAAGCACCGCAGATGT TGCCTGTGGCGGAGGGCTTCTCCGTGTTGCCATACGTAGTGCCTGCCATTGCCTTAGTCAGTGCTGTGGGGCCTTTGTAT CGCATCATCCTGCCTCAGGCGTTAAATAGTCCGCTGGGCTTAGTTCCTCTCTATATGGTGGTGATAATGCCATTCGTGTA CCGTTCCCTTGATGCGGGCATTCGGGTTGTTGATGTGCGCACGCTTTGGGATGCGAGTTCATCATTGGGGGCAGGTGCGG TTACCACGTTGGTGCGTGCCATCCTGCCTAACCTTCGCAGTGCCATCATGTCGGCATCGTTGTTGGGATGCGCAATTGTT TTAGGTGAATTTGCTATTGCTCAGCTTTTGCTCAAGACTACATTTCCTGTGATTCTTTCGCAGGTTGGTACTGCGCATCC GCACTCGGCTGCAGCGTTGGCCTTCATCACGATTATGGTCACATGGATACTGCTTGGACTGCTGTCAATGGTTGGAGGAA CTGGCAAACATAAAACCGCACAATACAGTAGTAAGGAAAACAAATGA
Upstream 100 bases:
>100_bases TTGTGGATGAGAATTTTGGTGCTGCGCTCATTGTCGGAATGATTGCCATCATCCTCGTGGCCTTCATCATGCGTTCTGTG CTTGAAAGGAGAACTGCGAA
Downstream 100 bases:
>100_bases CGACAGTTGCTGTGAGTTCTTTACCACAGGGGACATCCGTCACGTTGCGTAATGTGACTAAATCCTTCGGGACTACGAAG GTGCTCAATGGACTTGACCT
Product: ABC-type spermidine/putrescine transport system permease component II-like protein
Products: NA
Alternate protein names: Transmembrane Component Of ABC Transporter; ABC Transporter; ABC-Type Transport System Permease Protein; Permease Of ABC Transporter; ABC Transporter Integral Membrane Subunit; ABC Transporter Inner Membrane Subunit; Polyamine ABC Transporter Permease Protein; ABC Transporter Membrane Spanning Protein; ABC Transporter Permease Component; ABC Transporter Permease Protein
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MAAVTTDSKAVSSVKSESRIGAETNHDSASGAKCFAGNAFSDVRRNHPRYVGQTIVLSVCAVFFLLPLLASLWFGIHLPG TFITFDPLMEIVHMPGIGESIALSIGLALMTCLLSLVLMLPTLLILHLKAPQMLPVAEGFSVLPYVVPAIALVSAVGPLY RIILPQALNSPLGLVPLYMVVIMPFVYRSLDAGIRVVDVRTLWDASSSLGAGAVTTLVRAILPNLRSAIMSASLLGCAIV LGEFAIAQLLLKTTFPVILSQVGTAHPHSAAALAFITIMVTWILLGLLSMVGGTGKHKTAQYSSKENK
Sequences:
>Translated_308_residues MAAVTTDSKAVSSVKSESRIGAETNHDSASGAKCFAGNAFSDVRRNHPRYVGQTIVLSVCAVFFLLPLLASLWFGIHLPG TFITFDPLMEIVHMPGIGESIALSIGLALMTCLLSLVLMLPTLLILHLKAPQMLPVAEGFSVLPYVVPAIALVSAVGPLY RIILPQALNSPLGLVPLYMVVIMPFVYRSLDAGIRVVDVRTLWDASSSLGAGAVTTLVRAILPNLRSAIMSASLLGCAIV LGEFAIAQLLLKTTFPVILSQVGTAHPHSAAALAFITIMVTWILLGLLSMVGGTGKHKTAQYSSKENK >Mature_307_residues AAVTTDSKAVSSVKSESRIGAETNHDSASGAKCFAGNAFSDVRRNHPRYVGQTIVLSVCAVFFLLPLLASLWFGIHLPGT FITFDPLMEIVHMPGIGESIALSIGLALMTCLLSLVLMLPTLLILHLKAPQMLPVAEGFSVLPYVVPAIALVSAVGPLYR IILPQALNSPLGLVPLYMVVIMPFVYRSLDAGIRVVDVRTLWDASSSLGAGAVTTLVRAILPNLRSAIMSASLLGCAIVL GEFAIAQLLLKTTFPVILSQVGTAHPHSAAALAFITIMVTWILLGLLSMVGGTGKHKTAQYSSKENK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32613; Mature: 32482
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVTTDSKAVSSVKSESRIGAETNHDSASGAKCFAGNAFSDVRRNHPRYVGQTIVLSVC CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHCCCHHHHHHHHHHHH AVFFLLPLLASLWFGIHLPGTFITFDPLMEIVHMPGIGESIALSIGLALMTCLLSLVLML HHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH PTLLILHLKAPQMLPVAEGFSVLPYVVPAIALVSAVGPLYRIILPQALNSPLGLVPLYMV HHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VIMPFVYRSLDAGIRVVDVRTLWDASSSLGAGAVTTLVRAILPNLRSAIMSASLLGCAIV HHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGEFAIAQLLLKTTFPVILSQVGTAHPHSAAALAFITIMVTWILLGLLSMVGGTGKHKTA HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC QYSSKENK CCCCCCCC >Mature Secondary Structure AAVTTDSKAVSSVKSESRIGAETNHDSASGAKCFAGNAFSDVRRNHPRYVGQTIVLSVC CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHCCCHHHHHHHHHHHH AVFFLLPLLASLWFGIHLPGTFITFDPLMEIVHMPGIGESIALSIGLALMTCLLSLVLML HHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH PTLLILHLKAPQMLPVAEGFSVLPYVVPAIALVSAVGPLYRIILPQALNSPLGLVPLYMV HHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH VIMPFVYRSLDAGIRVVDVRTLWDASSSLGAGAVTTLVRAILPNLRSAIMSASLLGCAIV HHHHHHHHHHHCCCEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGEFAIAQLLLKTTFPVILSQVGTAHPHSAAALAFITIMVTWILLGLLSMVGGTGKHKTA HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC QYSSKENK CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA