| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691520
Identifier: 213691520
GI number: 213691520
Start: 707797
End: 709002
Strand: Direct
Name: 213691520
Synonym: Blon_0621
Alternate gene names: NA
Gene position: 707797-709002 (Clockwise)
Preceding gene: 213691519
Following gene: 213691521
Centisome position: 24.99
GC content: 60.78
Gene sequence:
>1206_bases ATGGCATCGGGCGCGCTGGGTGTTGGCGAACGAATTAATGGGGTGAACCTCGGCAATTGGCTGGTGCTGGAGCGGTGGAT GAAGCCGGGGATTTTTGCCGCCAGCGGCGAGGCGGACGAGATCTGGCTGCATCGGGCTACGAAGTCGGCTGAGCTGGAGG CTTTGCTGACGCGGCATCGCGACACGTATATTACCGAGGCCGATTTCCGGAACATTGCCGCACATGGCTGCAATCTGGTG CGTATTCCAGTGCCGTATTTCGTGTTCGGGGATGTGCCCGGTCACCCGGGCTGTACCGAGTATCTGGACAGAGCGTTCGA CTGGGCCGAGCGGGCCGGGCTCAAGATTCTTATCGACCTGCACACGGTGCCCGGCTCGCAGAACGGATTCGATAACGGCG GCCTCACCGGCGTGGTGCGCTGGCATCGTAGCCTGCGAGCGGTCGCCTATGCGCTGGATGTGCTGGTCCGTCTGGCTCGC CGGTATCGCGACCACGCGGCGCTGTTCGGTATCGAAGTGCTGAATGAGCCGATTGACTGGCTGACGTATGCCATGTCACC ATCGAGCAGGCAGGCGAAAGACCGGTCCGAAGCGCGAGGAAGCGGGCCTATTCCGATGGCGTTCCTCAAGCGTTTCTACC GCGAGACATACCACCGGTTGCGCCCGATTCTGGCAGGGAATCAAGTCATCGTGTTCCATGACGGCTTCCGACTGGGCCGT TGGCGGGACTGGTTCGTGCGCGAGGGCATGCGGGGCGTCATGCTCGATACGCATGTCTATATGGTCATGGCCGAGCAATT CCCGCTGTTCCGTCTGATCCCGGATCGGTGGCTGATGGGCTGGTATCGCTTGTTTGTGCGCTGGAACGAACGCCGCATCC GCCGGGCCGCGCGCTATGCGCCGGTGATTGTAGGGGAGTGGTGCGTGGCTAATGGTCTGGTAAATCGGGTGGTCGATAAG CGTACAGGCGATGGTGGCCGCTCCAAGGAAAACGCCATGCACAGTGCATCTATCAGAGGCTCTATTTACCGCGAGGTCGC CGCCATGCAACGCAAGGCATGGAACGTGTCCGCCGGGCAAATCTATTGGAGCTACCAATTACGTGGTAATCGTGATTTCT TGCCTACCATCGACCCGCAATCCGACACGTCACGCCTCGACCCCTGGGATCTCACTCACGTTTGGCACGCCGGTTGGATG GCGTAA
Upstream 100 bases:
>100_bases GTGGACGCCATCATCGCTGATTACATCCCCGAGTTTGAGCGTGCAAATCAGGGGTTGGTCGCTCGCTACGGTGAAGCATT GAACGATTAGCGTGACAGGT
Downstream 100 bases:
>100_bases TGAGAACGAAATCGCTCTCTGAGGGCATGATTCGAAACAATTGTGTAAGGTAGAGAGTGAGCTTCGTGACCCGGCCTATC CTTTGCGGCGGGGTGGGTTG
Product: Glucan 1,3-beta-glucosidase
Products: NA
Alternate protein names: Endoglucanase; Glycoside Hydrolase; Beta-Glucosidase; Endoglucanase-Like Protein; Glucan Exo-13-Beta Glucosidase Glu5A; Glycoside Hydrolase Family 5 Domain Protein; Glycoside Hydrolase Family Protein; Cellulase; Beta-1 3-Exoglucanase
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MASGALGVGERINGVNLGNWLVLERWMKPGIFAASGEADEIWLHRATKSAELEALLTRHRDTYITEADFRNIAAHGCNLV RIPVPYFVFGDVPGHPGCTEYLDRAFDWAERAGLKILIDLHTVPGSQNGFDNGGLTGVVRWHRSLRAVAYALDVLVRLAR RYRDHAALFGIEVLNEPIDWLTYAMSPSSRQAKDRSEARGSGPIPMAFLKRFYRETYHRLRPILAGNQVIVFHDGFRLGR WRDWFVREGMRGVMLDTHVYMVMAEQFPLFRLIPDRWLMGWYRLFVRWNERRIRRAARYAPVIVGEWCVANGLVNRVVDK RTGDGGRSKENAMHSASIRGSIYREVAAMQRKAWNVSAGQIYWSYQLRGNRDFLPTIDPQSDTSRLDPWDLTHVWHAGWM A
Sequences:
>Translated_401_residues MASGALGVGERINGVNLGNWLVLERWMKPGIFAASGEADEIWLHRATKSAELEALLTRHRDTYITEADFRNIAAHGCNLV RIPVPYFVFGDVPGHPGCTEYLDRAFDWAERAGLKILIDLHTVPGSQNGFDNGGLTGVVRWHRSLRAVAYALDVLVRLAR RYRDHAALFGIEVLNEPIDWLTYAMSPSSRQAKDRSEARGSGPIPMAFLKRFYRETYHRLRPILAGNQVIVFHDGFRLGR WRDWFVREGMRGVMLDTHVYMVMAEQFPLFRLIPDRWLMGWYRLFVRWNERRIRRAARYAPVIVGEWCVANGLVNRVVDK RTGDGGRSKENAMHSASIRGSIYREVAAMQRKAWNVSAGQIYWSYQLRGNRDFLPTIDPQSDTSRLDPWDLTHVWHAGWM A >Mature_400_residues ASGALGVGERINGVNLGNWLVLERWMKPGIFAASGEADEIWLHRATKSAELEALLTRHRDTYITEADFRNIAAHGCNLVR IPVPYFVFGDVPGHPGCTEYLDRAFDWAERAGLKILIDLHTVPGSQNGFDNGGLTGVVRWHRSLRAVAYALDVLVRLARR YRDHAALFGIEVLNEPIDWLTYAMSPSSRQAKDRSEARGSGPIPMAFLKRFYRETYHRLRPILAGNQVIVFHDGFRLGRW RDWFVREGMRGVMLDTHVYMVMAEQFPLFRLIPDRWLMGWYRLFVRWNERRIRRAARYAPVIVGEWCVANGLVNRVVDKR TGDGGRSKENAMHSASIRGSIYREVAAMQRKAWNVSAGQIYWSYQLRGNRDFLPTIDPQSDTSRLDPWDLTHVWHAGWMA
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6324764, Length=399, Percent_Identity=29.3233082706767, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323331, Length=278, Percent_Identity=34.1726618705036, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6320467, Length=359, Percent_Identity=25.0696378830084, Blast_Score=99, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46066; Mature: 45935
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGALGVGERINGVNLGNWLVLERWMKPGIFAASGEADEIWLHRATKSAELEALLTRHR CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHCC DTYITEADFRNIAAHGCNLVRIPVPYFVFGDVPGHPGCTEYLDRAFDWAERAGLKILIDL CCEEEHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEE HTVPGSQNGFDNGGLTGVVRWHRSLRAVAYALDVLVRLARRYRDHAALFGIEVLNEPIDW EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LTYAMSPSSRQAKDRSEARGSGPIPMAFLKRFYRETYHRLRPILAGNQVIVFHDGFRLGR HHEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC WRDWFVREGMRGVMLDTHVYMVMAEQFPLFRLIPDRWLMGWYRLFVRWNERRIRRAARYA CHHHHHHCCCCCEEEHHHEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC PVIVGEWCVANGLVNRVVDKRTGDGGRSKENAMHSASIRGSIYREVAAMQRKAWNVSAGQ CEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE IYWSYQLRGNRDFLPTIDPQSDTSRLDPWDLTHVWHAGWMA EEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure ASGALGVGERINGVNLGNWLVLERWMKPGIFAASGEADEIWLHRATKSAELEALLTRHR CCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHCC DTYITEADFRNIAAHGCNLVRIPVPYFVFGDVPGHPGCTEYLDRAFDWAERAGLKILIDL CCEEEHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEE HTVPGSQNGFDNGGLTGVVRWHRSLRAVAYALDVLVRLARRYRDHAALFGIEVLNEPIDW EECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LTYAMSPSSRQAKDRSEARGSGPIPMAFLKRFYRETYHRLRPILAGNQVIVFHDGFRLGR HHEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC WRDWFVREGMRGVMLDTHVYMVMAEQFPLFRLIPDRWLMGWYRLFVRWNERRIRRAARYA CHHHHHHCCCCCEEEHHHEEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC PVIVGEWCVANGLVNRVVDKRTGDGGRSKENAMHSASIRGSIYREVAAMQRKAWNVSAGQ CEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE IYWSYQLRGNRDFLPTIDPQSDTSRLDPWDLTHVWHAGWMA EEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA