| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691497
Identifier: 213691497
GI number: 213691497
Start: 674328
End: 675347
Strand: Reverse
Name: 213691497
Synonym: Blon_0595
Alternate gene names: NA
Gene position: 675347-674328 (Counterclockwise)
Preceding gene: 213691498
Following gene: 213691493
Centisome position: 23.84
GC content: 63.43
Gene sequence:
>1020_bases ATGAGCGAAGAGCGTACCGCATGGGGATGGGGTCTGGCCAGCGTAGACGCCGCCGGCACCACCCTGGACGTCTGGTACCC CGAACTGAATCTCGGTGAGGCACCGGCCGAGGCCGATCGTCCAAACCACAATTTCGGCACTCTGGCTCACGATGAAGCCG ACGCCCGTGGCATCCGCCGCGTGCCGGTATTCGTCGTCAGCCAGTTGGACGAGCCGATCAGCAACGCCGCGGACGCTTAC CTGAAACTCCATCTGATGAGCATGCGCATGGCCAAGCCGAACACGCTGAACCTCGACGGCATCTTCACCCAACTCGCCAA TGTGGTGTGGACCAACTACGGCCCCTTCGCCGTTGAAGACTTCACGCTGCGCAAGGCCGACGTCGAACGCGCCTCCACCG AAGCCGCTCTCGCTTTCGCCTCCCAGGCCGGACTGCCTGCCGCAGCTCCTGCCACCACCGTCAACGTGCTCGGTGTGGAT AAGTTCCCGCGCATGATCGATTACGTAGTGCCCACCGGCGTGCGTATCGGCGACGCCGACCGCGTGCGCCTCGGCGCTTA CTTGTCTTCCGGCACCACCGTGATGCACGCCGGATTCGTGAACTTCAATGCCGGCACGCTCGGCGTCTCCATGGTCGAAG GCCGCGTTTCGCAAGGTGTGGTCGTGGGCGACGGTTCCGATATCGGCGGCGGCGCCTCCATCATGGGCACCCTCTCCGGT GGCGGCAAGCTGCGCAACTCCATCGGCGAGCACTCGCTGCTCGGCGCCAACGCCGGTATCGGCATCTCCCTCGGCGATAA CTGCACCGTCGAAGCCGGTCTGTACATCACCGCCGGCACCAAGATCACCATCTGGGACAAGGCCAAGGCCGCCGCTGGCG AACCGCTGGAAGTGGTCAAGGGTGCTGAGCTCTCCGGCAAAGACAACATTCTGTTTATCCGCAACTCGGTGAACGGCCGC ATCGAAGCCCGCTACCGCAAGGTGGGCATCGAGCTCAACGAAAAGCTGCATAAGAACTAA
Upstream 100 bases:
>100_bases GAACTATGGCCCCCGCCTAGCCGTACTTGACGCTAAGGTGGAACCATCACATGCCGCGATGCACATGCAATGCAAACGCA ACGATATGTAAGGAGCAACT
Downstream 100 bases:
>100_bases GCAGTCAGCCCATATTGGGTGCCTAGCGGTTATGTAAACGCCTCATTTGGTATTCCAGTGAGGCGTTTTCTCTTACTAAC CGAGGGTTTGCCCCGCTGAC
Product: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase
Products: CoA; (R)-2-(succinylamino)-6-oxoheptanedioate
Alternate protein names: Transferase; Tetrahydrodipicolinate Succinylase; Tetrahydropicolinate Succinylase; Tetrahydrodipicolinate N- Succinyltransferase; Succinyltransferase; Transferase Hexapeptide Repeat Containing Protein; Succinyl-Transferase; Lysine Biosynthesis-Like Protein; Transferase Tetrahydrodipicolinate N-Succinyltransferase; Tranferase; Tetrahydrodipicolinate N-Succinyltransferase-Like Protein
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSEERTAWGWGLASVDAAGTTLDVWYPELNLGEAPAEADRPNHNFGTLAHDEADARGIRRVPVFVVSQLDEPISNAADAY LKLHLMSMRMAKPNTLNLDGIFTQLANVVWTNYGPFAVEDFTLRKADVERASTEAALAFASQAGLPAAAPATTVNVLGVD KFPRMIDYVVPTGVRIGDADRVRLGAYLSSGTTVMHAGFVNFNAGTLGVSMVEGRVSQGVVVGDGSDIGGGASIMGTLSG GGKLRNSIGEHSLLGANAGIGISLGDNCTVEAGLYITAGTKITIWDKAKAAAGEPLEVVKGAELSGKDNILFIRNSVNGR IEARYRKVGIELNEKLHKN
Sequences:
>Translated_339_residues MSEERTAWGWGLASVDAAGTTLDVWYPELNLGEAPAEADRPNHNFGTLAHDEADARGIRRVPVFVVSQLDEPISNAADAY LKLHLMSMRMAKPNTLNLDGIFTQLANVVWTNYGPFAVEDFTLRKADVERASTEAALAFASQAGLPAAAPATTVNVLGVD KFPRMIDYVVPTGVRIGDADRVRLGAYLSSGTTVMHAGFVNFNAGTLGVSMVEGRVSQGVVVGDGSDIGGGASIMGTLSG GGKLRNSIGEHSLLGANAGIGISLGDNCTVEAGLYITAGTKITIWDKAKAAAGEPLEVVKGAELSGKDNILFIRNSVNGR IEARYRKVGIELNEKLHKN >Mature_338_residues SEERTAWGWGLASVDAAGTTLDVWYPELNLGEAPAEADRPNHNFGTLAHDEADARGIRRVPVFVVSQLDEPISNAADAYL KLHLMSMRMAKPNTLNLDGIFTQLANVVWTNYGPFAVEDFTLRKADVERASTEAALAFASQAGLPAAAPATTVNVLGVDK FPRMIDYVVPTGVRIGDADRVRLGAYLSSGTTVMHAGFVNFNAGTLGVSMVEGRVSQGVVVGDGSDIGGGASIMGTLSGG GKLRNSIGEHSLLGANAGIGISLGDNCTVEAGLYITAGTKITIWDKAKAAAGEPLEVVKGAELSGKDNILFIRNSVNGRI EARYRKVGIELNEKLHKN
Specific function: Unknown
COG id: COG2171
COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.117
Molecular weight: Translated: 35739; Mature: 35608
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEERTAWGWGLASVDAAGTTLDVWYPELNLGEAPAEADRPNHNFGTLAHDEADARGIRR CCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEE VPVFVVSQLDEPISNAADAYLKLHLMSMRMAKPNTLNLDGIFTQLANVVWTNYGPFAVED CHHHHHHHHCHHHHHHHHHHHHHEEHHHHCCCCCEECHHHHHHHHHHHHCCCCCCEEEEC FTLRKADVERASTEAALAFASQAGLPAAAPATTVNVLGVDKFPRMIDYVVPTGVRIGDAD EEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCEEECCCC RVRLGAYLSSGTTVMHAGFVNFNAGTLGVSMVEGRVSQGVVVGDGSDIGGGASIMGTLSG CEEEEEEECCCCEEEEEEEEEECCCCCCCEEECCCCCCCEEEECCCCCCCCEEEEEEECC GGKLRNSIGEHSLLGANAGIGISLGDNCTVEAGLYITAGTKITIWDKAKAAAGEPLEVVK CHHHHHHCCCCEEECCCCCEEEEECCCCEEEEEEEEEECCEEEEEECCCCCCCCCHHHHC GAELSGKDNILFIRNSVNGRIEARYRKVGIELNEKLHKN CCCCCCCCCEEEEEECCCCEEEEEEEEECCEEHHHHCCC >Mature Secondary Structure SEERTAWGWGLASVDAAGTTLDVWYPELNLGEAPAEADRPNHNFGTLAHDEADARGIRR CCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCEE VPVFVVSQLDEPISNAADAYLKLHLMSMRMAKPNTLNLDGIFTQLANVVWTNYGPFAVED CHHHHHHHHCHHHHHHHHHHHHHEEHHHHCCCCCEECHHHHHHHHHHHHCCCCCCEEEEC FTLRKADVERASTEAALAFASQAGLPAAAPATTVNVLGVDKFPRMIDYVVPTGVRIGDAD EEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCEEECCCC RVRLGAYLSSGTTVMHAGFVNFNAGTLGVSMVEGRVSQGVVVGDGSDIGGGASIMGTLSG CEEEEEEECCCCEEEEEEEEEECCCCCCCEEECCCCCCCEEEECCCCCCCCEEEEEEECC GGKLRNSIGEHSLLGANAGIGISLGDNCTVEAGLYITAGTKITIWDKAKAAAGEPLEVVK CHHHHHHCCCCEEECCCCCEEEEECCCCEEEEEEEEEECCEEEEEECCCCCCCCCHHHHC GAELSGKDNILFIRNSVNGRIEARYRKVGIELNEKLHKN CCCCCCCCCEEEEEECCCCEEEEEEEEECCEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: succinyl-CoA; (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate; H2O
Specific reaction: succinyl-CoA + (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + (R)-2-(succinylamino)-6-oxoheptanedioate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA