| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is hemK [H]
Identifier: 213691479
GI number: 213691479
Start: 651117
End: 652001
Strand: Direct
Name: hemK [H]
Synonym: Blon_0576
Alternate gene names: 213691479
Gene position: 651117-652001 (Clockwise)
Preceding gene: 213691478
Following gene: 213691480
Centisome position: 22.99
GC content: 60.79
Gene sequence:
>885_bases ATGGCTGCTGCCGATGTGATTCGTGATGCCGCCGTGCAATTGCGTGAGGCTGGTATTGAGACGCCTGAGCATGATGCCAA ACTGCTCCTTGCCGAGGCGGCAGGTGTTGAGTTGCGCGATGTCGACAAAGCTCTGTTGATGGGGGAGGAGCTTGGCACAG CCGAACGGTTTGCCCGCTTCCAATCCATGCTTGCCCGCCGTGCCAAGCGCGAGCCGTTGCAATACATCACCGGTCATGCG CCGTTCCGCTATCTCGACCTGAAGGTCGGCCCTGGCGTGTTCATTCCGCGTCCGGAAACCGAAACCGTGGTGCAGGCCGG TCTTGACTGGCTGACAAGAAACGGCATGATCCATCCTTGTGTGGTCGATCTGTGCGCCGGCTCCGGCGCGATTGGGCTGT CCGTTGTCAGCGAGGTGCCCGGCAGCCAGGTGTGGGCGGTGGAGCTGTCGCCGAACACCGCCGAATGGACGCGAAGGAAT CTGTCGGAAACCGCGAAAAAGTACCCATCCATTGCCTCGAATTACCATCTGGAAATCGCGGATGCCACGTCCTTCGCCAC ATTGGCCCAATTGGACGGCACCGTCGATATCGTCATCACCAACCCGCCCTACGTGCCGCAAACCGACATTCCCGAACAGC CGGAAGTACGCGACTGGGACCCTGAACTGGCCCTGTACGGCGGTTCGGCGGACGGCACGCTCATCCCTGAGCGCATTATC GAACGCGCGTACCGACTGCTCAAGCCTGGCGGCGTATTGGTCATGGAGCATGATCTCACTCAAGGTGAGCGTCTGGTGGC CTATGCCAAGGCCATCGGATTTACCGCGGCCCACACCGGCAAGGATTGGACCGGCCGGGATCGCTATCTGTTCGCGGTTT CCTGA
Upstream 100 bases:
>100_bases ACACTCTAGGCCGTTCGGTCAAGCCTACGGTCGAGCATCGCATTTACCGGCCAAACCCTTACATTATGTGATAATTAAGG CACCGGAAGATAGGGATGTG
Downstream 100 bases:
>100_bases TATTTTCTAAAAATTTCAGGCTTTTCCTGTCTTTTTTCCGCGTTTTCCCGGAATCTTCTTCTCATTTTCCGCAATTACGC CGTCTCATAATAAGAGCAGG
Product: modification methylase, HemK family
Products: NA
Alternate protein names: M.MleHemKP [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MAAADVIRDAAVQLREAGIETPEHDAKLLLAEAAGVELRDVDKALLMGEELGTAERFARFQSMLARRAKREPLQYITGHA PFRYLDLKVGPGVFIPRPETETVVQAGLDWLTRNGMIHPCVVDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN LSETAKKYPSIASNYHLEIADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQPEVRDWDPELALYGGSADGTLIPERII ERAYRLLKPGGVLVMEHDLTQGERLVAYAKAIGFTAAHTGKDWTGRDRYLFAVS
Sequences:
>Translated_294_residues MAAADVIRDAAVQLREAGIETPEHDAKLLLAEAAGVELRDVDKALLMGEELGTAERFARFQSMLARRAKREPLQYITGHA PFRYLDLKVGPGVFIPRPETETVVQAGLDWLTRNGMIHPCVVDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRN LSETAKKYPSIASNYHLEIADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQPEVRDWDPELALYGGSADGTLIPERII ERAYRLLKPGGVLVMEHDLTQGERLVAYAKAIGFTAAHTGKDWTGRDRYLFAVS >Mature_293_residues AAADVIRDAAVQLREAGIETPEHDAKLLLAEAAGVELRDVDKALLMGEELGTAERFARFQSMLARRAKREPLQYITGHAP FRYLDLKVGPGVFIPRPETETVVQAGLDWLTRNGMIHPCVVDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRNL SETAKKYPSIASNYHLEIADATSFATLAQLDGTVDIVITNPPYVPQTDIPEQPEVRDWDPELALYGGSADGTLIPERIIE RAYRLLKPGGVLVMEHDLTQGERLVAYAKAIGFTAAHTGKDWTGRDRYLFAVS
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=298, Percent_Identity=27.8523489932886, Blast_Score=98, Evalue=8e-21, Organism=Escherichia coli, GI1787463, Length=284, Percent_Identity=32.0422535211268, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI87082085, Length=206, Percent_Identity=27.6699029126214, Blast_Score=77, Evalue=9e-16, Organism=Drosophila melanogaster, GI24582226, Length=251, Percent_Identity=29.8804780876494, Blast_Score=91, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 32133; Mature: 32002
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAADVIRDAAVQLREAGIETPEHDAKLLLAEAAGVELRDVDKALLMGEELGTAERFARF CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHCCHHHHHHHH QSMLARRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQAGLDWLTRNGMIHPC HHHHHHHHHCCCHHHHCCCCCEEEEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCHH VVDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRNLSETAKKYPSIASNYHLEIA HHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE DATSFATLAQLDGTVDIVITNPPYVPQTDIPEQPEVRDWDPELALYGGSADGTLIPERII CCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHH ERAYRLLKPGGVLVMEHDLTQGERLVAYAKAIGFTAAHTGKDWTGRDRYLFAVS HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEC >Mature Secondary Structure AAADVIRDAAVQLREAGIETPEHDAKLLLAEAAGVELRDVDKALLMGEELGTAERFARF CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHCCHHHHHHHH QSMLARRAKREPLQYITGHAPFRYLDLKVGPGVFIPRPETETVVQAGLDWLTRNGMIHPC HHHHHHHHHCCCHHHHCCCCCEEEEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCHH VVDLCAGSGAIGLSVVSEVPGSQVWAVELSPNTAEWTRRNLSETAKKYPSIASNYHLEIA HHHHHCCCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEE DATSFATLAQLDGTVDIVITNPPYVPQTDIPEQPEVRDWDPELALYGGSADGTLIPERII CCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHH ERAYRLLKPGGVLVMEHDLTQGERLVAYAKAIGFTAAHTGKDWTGRDRYLFAVS HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]