| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is folE [H]
Identifier: 213691455
GI number: 213691455
Start: 621938
End: 622519
Strand: Direct
Name: folE [H]
Synonym: Blon_0550
Alternate gene names: 213691455
Gene position: 621938-622519 (Clockwise)
Preceding gene: 213691454
Following gene: 213691456
Centisome position: 21.96
GC content: 62.89
Gene sequence:
>582_bases ATGAATGAAAACGGGAAGTCCTCATACGACGAGGAAGGCGTGCGCGAAGCCGTACGCCTGTTCCTGAAGTCGATTGGCGA GGATCCCGAGCGCGAGGGACTGGTGGAAACGCCTGACCGTATCGCCCGCGCGTGCCGCGAGCTGTTCGCCGGTCTGCAGG CTTCCCCGGCCGATGTGCTGGAGAAGCACTTCGACGTGGATACCGACGAGCTGGTGCTGGTCAAGGACATCGAACTGTAT TCGGTGTGCGAGCATCACCTGCTGCCGTTCCATGGCGTGGCCCATGTGGGCTATATTCCCGCCAAGGACGGGGTGATGGG GCTGAGCAAGCTCGCCCGACTGGTCGAGGTGTATGCTCGCCGGCCGCAGGTGCAGGAGCGTTTGACCCAGCAGATCGCCG ACGCGCTGGTCGAGTACGCGGGCGCACGTGGTGTGATTGTGGTGACCGAATGCGAGCACCTGTGCATGTCGATGCGCGGC ATCAAGAAATCCTCCGCGCGCACGGTGACCTCTGCGGTGCGCGGCATGCTGCGCAATCCGGCCACCCGAGCCGAAGCCAT GAGCTTGATTCTTGACAAGTGA
Upstream 100 bases:
>100_bases GATTCGGCCCGACCTGTCCATGTGGTTTCTCACGTACGCAGGCCGGGCCGACGTCGTTGTGGACAATGACATGGTGAACG AAACGATTGGGAGGGATCAG
Downstream 100 bases:
>100_bases CGCAACCTAGGCTCCCCTCTCTGAGGGGAGCGAAGGGAAACAACGAAGGGGAAATAACCTATGACTGATTTGCAGGCGTT GCATGACAGTACGCGCACCA
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNENGKSSYDEEGVREAVRLFLKSIGEDPEREGLVETPDRIARACRELFAGLQASPADVLEKHFDVDTDELVLVKDIELY SVCEHHLLPFHGVAHVGYIPAKDGVMGLSKLARLVEVYARRPQVQERLTQQIADALVEYAGARGVIVVTECEHLCMSMRG IKKSSARTVTSAVRGMLRNPATRAEAMSLILDK
Sequences:
>Translated_193_residues MNENGKSSYDEEGVREAVRLFLKSIGEDPEREGLVETPDRIARACRELFAGLQASPADVLEKHFDVDTDELVLVKDIELY SVCEHHLLPFHGVAHVGYIPAKDGVMGLSKLARLVEVYARRPQVQERLTQQIADALVEYAGARGVIVVTECEHLCMSMRG IKKSSARTVTSAVRGMLRNPATRAEAMSLILDK >Mature_193_residues MNENGKSSYDEEGVREAVRLFLKSIGEDPEREGLVETPDRIARACRELFAGLQASPADVLEKHFDVDTDELVLVKDIELY SVCEHHLLPFHGVAHVGYIPAKDGVMGLSKLARLVEVYARRPQVQERLTQQIADALVEYAGARGVIVVTECEHLCMSMRG IKKSSARTVTSAVRGMLRNPATRAEAMSLILDK
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=172, Percent_Identity=52.9069767441861, Blast_Score=179, Evalue=1e-45, Organism=Homo sapiens, GI4503949, Length=172, Percent_Identity=52.9069767441861, Blast_Score=179, Evalue=1e-45, Organism=Homo sapiens, GI66932970, Length=142, Percent_Identity=51.4084507042254, Blast_Score=140, Evalue=8e-34, Organism=Homo sapiens, GI66932972, Length=132, Percent_Identity=54.5454545454545, Blast_Score=140, Evalue=9e-34, Organism=Escherichia coli, GI1788476, Length=171, Percent_Identity=40.9356725146199, Blast_Score=112, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17560486, Length=176, Percent_Identity=50.5681818181818, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6321706, Length=176, Percent_Identity=51.7045454545455, Blast_Score=173, Evalue=2e-44, Organism=Drosophila melanogaster, GI24656782, Length=179, Percent_Identity=49.1620111731844, Blast_Score=167, Evalue=3e-42, Organism=Drosophila melanogaster, GI24656796, Length=179, Percent_Identity=49.1620111731844, Blast_Score=166, Evalue=7e-42, Organism=Drosophila melanogaster, GI24656791, Length=179, Percent_Identity=49.1620111731844, Blast_Score=166, Evalue=8e-42,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 21389; Mature: 21389
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENGKSSYDEEGVREAVRLFLKSIGEDPEREGLVETPDRIARACRELFAGLQASPADVL CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH EKHFDVDTDELVLVKDIELYSVCEHHLLPFHGVAHVGYIPAKDGVMGLSKLARLVEVYAR HHHCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC RPQVQERLTQQIADALVEYAGARGVIVVTECEHLCMSMRGIKKSSARTVTSAVRGMLRNP CCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC ATRAEAMSLILDK HHHHHHHHHHHCC >Mature Secondary Structure MNENGKSSYDEEGVREAVRLFLKSIGEDPEREGLVETPDRIARACRELFAGLQASPADVL CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH EKHFDVDTDELVLVKDIELYSVCEHHLLPFHGVAHVGYIPAKDGVMGLSKLARLVEVYAR HHHCCCCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC RPQVQERLTQQIADALVEYAGARGVIVVTECEHLCMSMRGIKKSSARTVTSAVRGMLRNP CCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC ATRAEAMSLILDK HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA