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The map label for this gene is yibD [C]

Identifier: 213691446

GI number: 213691446

Start: 609809

End: 610735

Strand: Reverse

Name: yibD [C]

Synonym: Blon_0541

Alternate gene names: 213691446

Gene position: 610735-609809 (Counterclockwise)

Preceding gene: 213691459

Following gene: 213691444

Centisome position: 21.56

GC content: 57.28

Gene sequence:

>927_bases
ATGCTCAACGTTTCGATCATCATCCCAGCGTGGAACGAAGCCGAACGCATCCGCGACTGCCTGCTGAACGCCACCCGTCA
GACCATCATGCCGCATGAGGTGCTGGTGGTGGACAACCGTTCTACGGACAACACCTGCGCGATTGTCGAACAGTTCATCG
CCGAACATCCCGAGGCCCCGATCAAACTATTGCATCAGAACGATGAACAGGGACTGATTCCCACCCGCAACTTTGGCCTG
GACGCCGCGACCGGCGATGTGCTGGGCCGTTTTGATGCCGACTGCATGATTCGGCCCGACTGGGTGGAGGTGGTCTCCGG
CATCTTCACCGAAGACCCGGCCGCGATGGGTGCCACTGGTCCGGTGATGTATTACGACATGCCCTCACGCCATTTTGGGT
TGAAGGGCGACAATTCCTTGCGCAAGCGAATCTACCGCGCCGATGGCGGACAGCCGCTGCTGTTCGGTTCCAATATGGCC
TTGCGCGCTTCGGCTTGGCATCAGATCGCGAATGAGGTCTGCCGAGATAAGGCCGATGTGATGCATGAGGATATCGATAT
TTCCCTGCATCTGATGGGCAAGAATCTGAAAACCGTGTACTCGCCGCGCATGATCGCCGCGATGAGCGCGCGACGGATGG
ACACGTCGCTGGGTTCATTCCTGAACTACATGCGACGTTTTAAGAATACGTTTGATGCACATCCGCAGCACACGCGCACG
CATAAGCCAGAGGTGTTGTTCACCGCCATGTATCCGGCGATGCACATGTTCTACCCGGTGTGGCAGAAAGTGCTGAATTC
CGCGGATATCAATCCTGCTGAAGCCGCGTGGATCAACGAGCAGATGGAACTGGCGGAGGCGCAAGGCAAGCAGCTGTACG
ACGAGACCACCACCGACGAAGTCTACGACGAAAAGCACGAGAGATAG

Upstream 100 bases:

>100_bases
TTACGTTTCGCGCGCGTTCACTCATGGCTCCCCATTGTAGCGAGGGGTTTGAAGCTCGAATACGCCGGCGGCGTACACCC
GCTTTTCTATTGTTGATGTC

Downstream 100 bases:

>100_bases
CGATGCCGGTGGGTTCCCGACGAGGGGAACCCACCGGCATCGTCGGCGTCATCGACGAATCACATCAGCGACTTGTAGAT
GGCGAGGATGTCCTCCTGCG

Product: glycosyl transferase, family 2

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase Domain Group 2 Family Protein; Cell Wall Biogenesis Glycosyltransferase; Lacto-N-Neotetraose Biosynthesis Glycosyl Tranferase; Glycosyltransferase AglE; Glucosaminyltransferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Domain-Containing Protein; Cell Wall-Associated Hydrolase Invasion-Associated Protein; Glycosyl Transferase Group 2 Family Protein

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MLNVSIIIPAWNEAERIRDCLLNATRQTIMPHEVLVVDNRSTDNTCAIVEQFIAEHPEAPIKLLHQNDEQGLIPTRNFGL
DAATGDVLGRFDADCMIRPDWVEVVSGIFTEDPAAMGATGPVMYYDMPSRHFGLKGDNSLRKRIYRADGGQPLLFGSNMA
LRASAWHQIANEVCRDKADVMHEDIDISLHLMGKNLKTVYSPRMIAAMSARRMDTSLGSFLNYMRRFKNTFDAHPQHTRT
HKPEVLFTAMYPAMHMFYPVWQKVLNSADINPAEAAWINEQMELAEAQGKQLYDETTTDEVYDEKHER

Sequences:

>Translated_308_residues
MLNVSIIIPAWNEAERIRDCLLNATRQTIMPHEVLVVDNRSTDNTCAIVEQFIAEHPEAPIKLLHQNDEQGLIPTRNFGL
DAATGDVLGRFDADCMIRPDWVEVVSGIFTEDPAAMGATGPVMYYDMPSRHFGLKGDNSLRKRIYRADGGQPLLFGSNMA
LRASAWHQIANEVCRDKADVMHEDIDISLHLMGKNLKTVYSPRMIAAMSARRMDTSLGSFLNYMRRFKNTFDAHPQHTRT
HKPEVLFTAMYPAMHMFYPVWQKVLNSADINPAEAAWINEQMELAEAQGKQLYDETTTDEVYDEKHER
>Mature_308_residues
MLNVSIIIPAWNEAERIRDCLLNATRQTIMPHEVLVVDNRSTDNTCAIVEQFIAEHPEAPIKLLHQNDEQGLIPTRNFGL
DAATGDVLGRFDADCMIRPDWVEVVSGIFTEDPAAMGATGPVMYYDMPSRHFGLKGDNSLRKRIYRADGGQPLLFGSNMA
LRASAWHQIANEVCRDKADVMHEDIDISLHLMGKNLKTVYSPRMIAAMSARRMDTSLGSFLNYMRRFKNTFDAHPQHTRT
HKPEVLFTAMYPAMHMFYPVWQKVLNSADINPAEAAWINEQMELAEAQGKQLYDETTTDEVYDEKHER

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790044, Length=109, Percent_Identity=31.1926605504587, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 35041; Mature: 35041

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNVSIIIPAWNEAERIRDCLLNATRQTIMPHEVLVVDNRSTDNTCAIVEQFIAEHPEAP
CEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCC
IKLLHQNDEQGLIPTRNFGLDAATGDVLGRFDADCMIRPDWVEVVSGIFTEDPAAMGATG
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCHHHHHHHHHHCCCCCCCCCCC
PVMYYDMPSRHFGLKGDNSLRKRIYRADGGQPLLFGSNMALRASAWHQIANEVCRDKADV
CEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHHHHHHHHHHHH
MHEDIDISLHLMGKNLKTVYSPRMIAAMSARRMDTSLGSFLNYMRRFKNTFDAHPQHTRT
HHHCCCEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
HKPEVLFTAMYPAMHMFYPVWQKVLNSADINPAEAAWINEQMELAEAQGKQLYDETTTDE
CCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
VYDEKHER
HHHHHCCC
>Mature Secondary Structure
MLNVSIIIPAWNEAERIRDCLLNATRQTIMPHEVLVVDNRSTDNTCAIVEQFIAEHPEAP
CEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCC
IKLLHQNDEQGLIPTRNFGLDAATGDVLGRFDADCMIRPDWVEVVSGIFTEDPAAMGATG
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCHHHHHHHHHHCCCCCCCCCCC
PVMYYDMPSRHFGLKGDNSLRKRIYRADGGQPLLFGSNMALRASAWHQIANEVCRDKADV
CEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHHHHHHHHHHHH
MHEDIDISLHLMGKNLKTVYSPRMIAAMSARRMDTSLGSFLNYMRRFKNTFDAHPQHTRT
HHHCCCEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
HKPEVLFTAMYPAMHMFYPVWQKVLNSADINPAEAAWINEQMELAEAQGKQLYDETTTDE
CCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
VYDEKHER
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA