| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691406
Identifier: 213691406
GI number: 213691406
Start: 571506
End: 572666
Strand: Reverse
Name: 213691406
Synonym: Blon_0500
Alternate gene names: NA
Gene position: 572666-571506 (Counterclockwise)
Preceding gene: 213691407
Following gene: 213691404
Centisome position: 20.22
GC content: 49.27
Gene sequence:
>1161_bases ATGAGGATTCGGAAATCTCCTCTTGTTTCCTTTGTGCTCAACCATCCCACGTACATCGGATACCTACTTTCCATAGTTAG CGTCGCACTCACTATGGCGGAAACTATGATATTGCCCCCCAATACAATATGGACGCTGGTATTCTGTATCATCCATATGA TCGCGGTAATGATGCTTCCGAGCCGACCACTATTAGGGAGCAACCTGGCACTAGCATCGTTTATCATATGCTGCTTCATA CCCGATGACGGAGGACCCACCCTGCTCTGGGGCACTTGGCTTTCGTTGGCGTATATAGGATTATCGATTAAGTCACCGAT TGGGTTTATGTACCCGCTGATCGTCTCGGTCGCACGCATGTGGAGCTTCAACGAAGCAGGGACACCATTTCGGGAATCTT TCACATTGCTATTCATCATGTTCTTCGCTTATTACATTGGACGAGCCCTCGGATGGAGGAACATGAAGCATCAGGCCGAA ACAAACAGACTGGAACGCAATCAGCTACGGCAACGTTTGGACACGCTACGCAAGGAAAACGAGGCCGCCATCCATATCCA TGATTCGGTCGCCGCGAACCTGACCTATGCCGCAATGCTGCTGGACGACAAGATGATCCAGAACGAATATGAATTTACGG AACGTGAAATCAGCGAACTGCACGGGAAAATAATGGACACTCTTAAAGACGTTAGAACAGCCATCAATCTGATGCAAGGC GAGGAAATTCCCCATCAGACCGGAGACAGCACGACAGCCGCCGCGAAAATACAATCAATCATCAACAGTGGCGACGAATC GTTAATGAGACTCGGATTCTCCGGCAAAACCGAACTGTCAGTTCGGTCCCTGAACCACGCGGATTCCCGTTGCCTGATTG AAATATCCTCACTGCTGCCTGAATTGTATACAAACATTGCCGTTCATGCATCGCCGAACAGCGAGTATTTCATTCGCATC ACCTATAAAGACGGAGCGATGATTATCGATCAGGTCAACGAAATCTCAGATAGCACACTGCTTCCAGACAAGCCGGCTTC GAACAACGGGCTGAGACTGCACACCGAACGAATTCAGTCCGAGGGAGGAGCCGTGAAAACCTCATCCGAAGATGGAACAT GGCAGTTCCATGCGTCAATACCAGTACGCACAAATCAGTGA
Upstream 100 bases:
>100_bases GCGAATCAACTGTCAAGACCTACATCAAACGCGTGACCGAAAAAATGGACGTTAAAAATCGAACTCAAGCGGTGATATGT TGGCTCAAAGAGAGGGAATC
Downstream 100 bases:
>100_bases CGGCAAAGCCATAGCAGAAATGGCGGGCAATGTTGATTCAACATCAAAGAAGGCTCTGACGCATTAGATGCATATGGAAC TGCATAATTGACAGATTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MRIRKSPLVSFVLNHPTYIGYLLSIVSVALTMAETMILPPNTIWTLVFCIIHMIAVMMLPSRPLLGSNLALASFIICCFI PDDGGPTLLWGTWLSLAYIGLSIKSPIGFMYPLIVSVARMWSFNEAGTPFRESFTLLFIMFFAYYIGRALGWRNMKHQAE TNRLERNQLRQRLDTLRKENEAAIHIHDSVAANLTYAAMLLDDKMIQNEYEFTEREISELHGKIMDTLKDVRTAINLMQG EEIPHQTGDSTTAAAKIQSIINSGDESLMRLGFSGKTELSVRSLNHADSRCLIEISSLLPELYTNIAVHASPNSEYFIRI TYKDGAMIIDQVNEISDSTLLPDKPASNNGLRLHTERIQSEGGAVKTSSEDGTWQFHASIPVRTNQ
Sequences:
>Translated_386_residues MRIRKSPLVSFVLNHPTYIGYLLSIVSVALTMAETMILPPNTIWTLVFCIIHMIAVMMLPSRPLLGSNLALASFIICCFI PDDGGPTLLWGTWLSLAYIGLSIKSPIGFMYPLIVSVARMWSFNEAGTPFRESFTLLFIMFFAYYIGRALGWRNMKHQAE TNRLERNQLRQRLDTLRKENEAAIHIHDSVAANLTYAAMLLDDKMIQNEYEFTEREISELHGKIMDTLKDVRTAINLMQG EEIPHQTGDSTTAAAKIQSIINSGDESLMRLGFSGKTELSVRSLNHADSRCLIEISSLLPELYTNIAVHASPNSEYFIRI TYKDGAMIIDQVNEISDSTLLPDKPASNNGLRLHTERIQSEGGAVKTSSEDGTWQFHASIPVRTNQ >Mature_386_residues MRIRKSPLVSFVLNHPTYIGYLLSIVSVALTMAETMILPPNTIWTLVFCIIHMIAVMMLPSRPLLGSNLALASFIICCFI PDDGGPTLLWGTWLSLAYIGLSIKSPIGFMYPLIVSVARMWSFNEAGTPFRESFTLLFIMFFAYYIGRALGWRNMKHQAE TNRLERNQLRQRLDTLRKENEAAIHIHDSVAANLTYAAMLLDDKMIQNEYEFTEREISELHGKIMDTLKDVRTAINLMQG EEIPHQTGDSTTAAAKIQSIINSGDESLMRLGFSGKTELSVRSLNHADSRCLIEISSLLPELYTNIAVHASPNSEYFIRI TYKDGAMIIDQVNEISDSTLLPDKPASNNGLRLHTERIQSEGGAVKTSSEDGTWQFHASIPVRTNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43334; Mature: 43334
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIRKSPLVSFVLNHPTYIGYLLSIVSVALTMAETMILPPNTIWTLVFCIIHMIAVMMLP CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCC SRPLLGSNLALASFIICCFIPDDGGPTLLWGTWLSLAYIGLSIKSPIGFMYPLIVSVARM CCCCCCCCHHHHHEEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH WSFNEAGTPFRESFTLLFIMFFAYYIGRALGWRNMKHQAETNRLERNQLRQRLDTLRKEN HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC EAAIHIHDSVAANLTYAAMLLDDKMIQNEYEFTEREISELHGKIMDTLKDVRTAINLMQG CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EEIPHQTGDSTTAAAKIQSIINSGDESLMRLGFSGKTELSVRSLNHADSRCLIEISSLLP CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHH ELYTNIAVHASPNSEYFIRITYKDGAMIIDQVNEISDSTLLPDKPASNNGLRLHTERIQS HHHHCEEEEECCCCCEEEEEEECCCCEEEHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHC EGGAVKTSSEDGTWQFHASIPVRTNQ CCCEEEECCCCCCEEEEEECCCCCCC >Mature Secondary Structure MRIRKSPLVSFVLNHPTYIGYLLSIVSVALTMAETMILPPNTIWTLVFCIIHMIAVMMLP CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCC SRPLLGSNLALASFIICCFIPDDGGPTLLWGTWLSLAYIGLSIKSPIGFMYPLIVSVARM CCCCCCCCHHHHHEEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH WSFNEAGTPFRESFTLLFIMFFAYYIGRALGWRNMKHQAETNRLERNQLRQRLDTLRKEN HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC EAAIHIHDSVAANLTYAAMLLDDKMIQNEYEFTEREISELHGKIMDTLKDVRTAINLMQG CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EEIPHQTGDSTTAAAKIQSIINSGDESLMRLGFSGKTELSVRSLNHADSRCLIEISSLLP CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHH ELYTNIAVHASPNSEYFIRITYKDGAMIIDQVNEISDSTLLPDKPASNNGLRLHTERIQS HHHHCEEEEECCCCCEEEEEEECCCCEEEHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHC EGGAVKTSSEDGTWQFHASIPVRTNQ CCCEEEECCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA