| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691384
Identifier: 213691384
GI number: 213691384
Start: 548714
End: 550303
Strand: Reverse
Name: 213691384
Synonym: Blon_0478
Alternate gene names: NA
Gene position: 550303-548714 (Counterclockwise)
Preceding gene: 213691385
Following gene: 213691383
Centisome position: 19.43
GC content: 55.47
Gene sequence:
>1590_bases ATGCCGTTTACGCATAAGAACCCAAACCGTACCGTGATTGTCCGCGGCGGGAAGCCGACGAACTATTCGAAGCTTCCCGC CTCCATCAGCATCAATGACGAGGGAACATGCGTCCAAGTTCCTCTGCTGAGTGGCGATCGCGTGTTCTGGACCGTCTCCG AAGATGAAGTGCTCCTGTCGGACAGCGCCTCCCGACTTGCAAGCATCACGAACGCCGATCTTGACCTGGAACGCATTGTC ATGGATTTGCTGCCTTCGCTCCCTGACAGCCTTCGAGGGGACAAATCCCCATGGAGGAACATACATTCCATACCCGCCGC AACCATACTGCACCTCGACAAATCCAATAGGCCGCGATATACGAGAGCGGAACCTTCACCCGCAAAACATGTTCCGAGCA ACGAGATCTTGGCATCACTAAGAAGCCGTTTCCTGACGATCGCGGATGAGTGGCGCAATGAGGCACCACTATCCGCCGAT GTGTCCGGAGGAGTGGATTCCGCCGCCATCACATACGTCTTCGCCAGCGAGGGGGTTCGTATGCCCCTGTATCATGAAAC ACCCGACGATCCAATGAATCAGGATTCCCGATGGGCCGAGCGAATCTCCGAGGACGTTCGGATGCCACTCATCAAAATCG GCCGGGTCGTGGATGGAAACAGATCATTCGAACCCGCAGCCGAATATCCCAACAGAGAGATACCTGAAGAACCGGTCTAC TGGAGCGATATCGAAGGCTATCTCAGCCGAATCTCCGAAATGGAAGCAGACGCAAGCCGTATCCATGTCACGGGTTTCGG AGGAGACGAGCTGTTCGCATCCATGCCATCCTCATCATGGAGCTGCCTGCGGGAACACCCGCTACGGCTACGGGACATCC GAAGACAATACAGCGCCGATTACCGGGTCCCACCCTATCAGGCAATTCTCGATCTCACCGATGGCACCGATCTGCATGAG GAATTACGGTCATCGTTCCTGGACGCGGAACAAGGTCATGACCATCGCTCTTCGCCTTGTGGATGGCATGATGCCATACG CATTCCCGAATTCCTGACCGCGAAAGCCAGGAATATCCTATATGGCGCCGTTGAATCACAATTGAAACACGCCGACATTC GGCCATTGAGCCCCGACCGAAGCCGTCATCAGGCGCTCTACTCTCTGTCAATGCAGGCACGAATACTCAATCAGGTTAAT CGGACGTTCTCCTCCGACGACATAACGTTCCGCTCCCCCTATCTGGACCACGGAATCGCGGACTATGCGCTATGCGCCCC AATCAGTGCACGCACCGAGGGAAATCTACACAAAGCCGTGTTATACCGGGCGCTCAAGGGCATAATCCCCGAAACGATAT TCCGGCGTCCCGTCAAAGGCGATCACTCATATTCACTGTATCTGGCATGGCAACGCTCGAAGGACGCGCTGCTCGACTCA ATCGCCGGCGGAGTGCTGGACGAGGAGGGACTGATCGATATGCCAGCCATACGGCGTCGAGCTTCCATGCCGATGCCTGA CATCACATTCCTGTTTGAAATGCAACGAGTAGCAGCAGTGGAAAGGTGGCTGAGACATGCAAGCCGATGA
Upstream 100 bases:
>100_bases CGATGTTGGCGGCGCCAAGGCCCCGTTCCCTTGGGGATCGAACTGACCGAAACCCTGCATATATTGATGATCCCTAGCTG TATCAGGATAGGGAAACGTG
Downstream 100 bases:
>100_bases CACACAGACAAGCATCAGTCTGAGGAATCAGATATCCCTGTATCCCAAGGAGGGCGGGGCAATCGTCTTCGTCAACGACA CCGGTGAATATCTGCAGGTC
Product: asparagine synthase
Products: NA
Alternate protein names: Asparagine Synthase
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MPFTHKNPNRTVIVRGGKPTNYSKLPASISINDEGTCVQVPLLSGDRVFWTVSEDEVLLSDSASRLASITNADLDLERIV MDLLPSLPDSLRGDKSPWRNIHSIPAATILHLDKSNRPRYTRAEPSPAKHVPSNEILASLRSRFLTIADEWRNEAPLSAD VSGGVDSAAITYVFASEGVRMPLYHETPDDPMNQDSRWAERISEDVRMPLIKIGRVVDGNRSFEPAAEYPNREIPEEPVY WSDIEGYLSRISEMEADASRIHVTGFGGDELFASMPSSSWSCLREHPLRLRDIRRQYSADYRVPPYQAILDLTDGTDLHE ELRSSFLDAEQGHDHRSSPCGWHDAIRIPEFLTAKARNILYGAVESQLKHADIRPLSPDRSRHQALYSLSMQARILNQVN RTFSSDDITFRSPYLDHGIADYALCAPISARTEGNLHKAVLYRALKGIIPETIFRRPVKGDHSYSLYLAWQRSKDALLDS IAGGVLDEEGLIDMPAIRRRASMPMPDITFLFEMQRVAAVERWLRHASR
Sequences:
>Translated_529_residues MPFTHKNPNRTVIVRGGKPTNYSKLPASISINDEGTCVQVPLLSGDRVFWTVSEDEVLLSDSASRLASITNADLDLERIV MDLLPSLPDSLRGDKSPWRNIHSIPAATILHLDKSNRPRYTRAEPSPAKHVPSNEILASLRSRFLTIADEWRNEAPLSAD VSGGVDSAAITYVFASEGVRMPLYHETPDDPMNQDSRWAERISEDVRMPLIKIGRVVDGNRSFEPAAEYPNREIPEEPVY WSDIEGYLSRISEMEADASRIHVTGFGGDELFASMPSSSWSCLREHPLRLRDIRRQYSADYRVPPYQAILDLTDGTDLHE ELRSSFLDAEQGHDHRSSPCGWHDAIRIPEFLTAKARNILYGAVESQLKHADIRPLSPDRSRHQALYSLSMQARILNQVN RTFSSDDITFRSPYLDHGIADYALCAPISARTEGNLHKAVLYRALKGIIPETIFRRPVKGDHSYSLYLAWQRSKDALLDS IAGGVLDEEGLIDMPAIRRRASMPMPDITFLFEMQRVAAVERWLRHASR >Mature_528_residues PFTHKNPNRTVIVRGGKPTNYSKLPASISINDEGTCVQVPLLSGDRVFWTVSEDEVLLSDSASRLASITNADLDLERIVM DLLPSLPDSLRGDKSPWRNIHSIPAATILHLDKSNRPRYTRAEPSPAKHVPSNEILASLRSRFLTIADEWRNEAPLSADV SGGVDSAAITYVFASEGVRMPLYHETPDDPMNQDSRWAERISEDVRMPLIKIGRVVDGNRSFEPAAEYPNREIPEEPVYW SDIEGYLSRISEMEADASRIHVTGFGGDELFASMPSSSWSCLREHPLRLRDIRRQYSADYRVPPYQAILDLTDGTDLHEE LRSSFLDAEQGHDHRSSPCGWHDAIRIPEFLTAKARNILYGAVESQLKHADIRPLSPDRSRHQALYSLSMQARILNQVNR TFSSDDITFRSPYLDHGIADYALCAPISARTEGNLHKAVLYRALKGIIPETIFRRPVKGDHSYSLYLAWQRSKDALLDSI AGGVLDEEGLIDMPAIRRRASMPMPDITFLFEMQRVAAVERWLRHASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59676; Mature: 59545
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFTHKNPNRTVIVRGGKPTNYSKLPASISINDEGTCVQVPLLSGDRVFWTVSEDEVLLS CCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEECCCEEEEEECCCCEEEC DSASRLASITNADLDLERIVMDLLPSLPDSLRGDKSPWRNIHSIPAATILHLDKSNRPRY CCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHCCCCEEEEEECCCCCCCC TRAEPSPAKHVPSNEILASLRSRFLTIADEWRNEAPLSADVSGGVDSAAITYVFASEGVR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCC MPLYHETPDDPMNQDSRWAERISEDVRMPLIKIGRVVDGNRSFEPAAEYPNREIPEEPVY CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCEECCCCCCCCHHHCCCCCCCCCCCC WSDIEGYLSRISEMEADASRIHVTGFGGDELFASMPSSSWSCLREHPLRLRDIRRQYSAD HHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCC YRVPPYQAILDLTDGTDLHEELRSSFLDAEQGHDHRSSPCGWHDAIRIPEFLTAKARNIL CCCCCHHHEEECCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH YGAVESQLKHADIRPLSPDRSRHQALYSLSMQARILNQVNRTFSSDDITFRSPYLDHGIA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHCCCH DYALCAPISARTEGNLHKAVLYRALKGIIPETIFRRPVKGDHSYSLYLAWQRSKDALLDS HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHH IAGGVLDEEGLIDMPAIRRRASMPMPDITFLFEMQRVAAVERWLRHASR HHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PFTHKNPNRTVIVRGGKPTNYSKLPASISINDEGTCVQVPLLSGDRVFWTVSEDEVLLS CCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEECCCEEEEEECCCCEEEC DSASRLASITNADLDLERIVMDLLPSLPDSLRGDKSPWRNIHSIPAATILHLDKSNRPRY CCHHHHHHHHCCCCCHHHHHHHHHHCCCHHHCCCCCHHHHHHCCCCEEEEEECCCCCCCC TRAEPSPAKHVPSNEILASLRSRFLTIADEWRNEAPLSADVSGGVDSAAITYVFASEGVR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCC MPLYHETPDDPMNQDSRWAERISEDVRMPLIKIGRVVDGNRSFEPAAEYPNREIPEEPVY CCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCEECCCCCCCCHHHCCCCCCCCCCCC WSDIEGYLSRISEMEADASRIHVTGFGGDELFASMPSSSWSCLREHPLRLRDIRRQYSAD HHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCC YRVPPYQAILDLTDGTDLHEELRSSFLDAEQGHDHRSSPCGWHDAIRIPEFLTAKARNIL CCCCCHHHEEECCCCCHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHCCHHHHHHHHHHHH YGAVESQLKHADIRPLSPDRSRHQALYSLSMQARILNQVNRTFSSDDITFRSPYLDHGIA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHCCCH DYALCAPISARTEGNLHKAVLYRALKGIIPETIFRRPVKGDHSYSLYLAWQRSKDALLDS HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHH IAGGVLDEEGLIDMPAIRRRASMPMPDITFLFEMQRVAAVERWLRHASR HHCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA