Click here to switch to the map view.

The map label for this gene is 213691366

Identifier: 213691366

GI number: 213691366

Start: 526916

End: 528193

Strand: Direct

Name: 213691366

Synonym: Blon_0458

Alternate gene names: NA

Gene position: 526916-528193 (Clockwise)

Preceding gene: 213691363

Following gene: 213691389

Centisome position: 18.6

GC content: 55.63

Gene sequence:

>1278_bases
ATGCCGAAAATCAGGCATTCCCATGGAAACCATCCGCAGAAGCCTCCGCGAAGCAAGTGGGGAACCGTGCTGGCCCGTTA
TGACAGAACCGGCATGCTAATCGCATGGCAGGTTCGATATCCGAATCCATTAGAACCCGGCAAACGCGTCCAACGCCAGT
TCAAGCCGGATCAGGAGCTCGAAGCCCGTAGATGGCTGGAAGCCGAAAAGTATCTTGTCAGCCTCCATCGTAACGGCATC
GCCGAATGGGTTCATCCAACGGAACGAAGCCGACGAAAAGCCGTCGAGGAAAAGAGCCGGACACAACGCAATATGTTGTT
CCGTGACTATGTGATGCGATGGGCCGAGGAATACCGGCTGCCCGACGGCAACGGTATCGCCGGTGGCACGCGTCGCAATC
TTTACCTGGACATTGGCCATTTTTTGCCAAGTCTTGGGGACCTGCCGCTTAACGAGATCACTCCGTCCATCATCAAGGCT
TGGTATGATGCGCCTCACCCGGAAGGACGGTGGGCGTTCCGACGCTCATGCATGCGGCTGAAGGCGGTACTGGAATCAGC
CACCCGAGGCGGATTGGACGGTTCGGAGCCATTGCTGTCCTTCAATCCCTTCATATTCCATATTCCGCCAGCGCCACAGC
CCGCCCGCATCAATGTACCGCCGGTGACTCCTTCCGAATTAATCCTGCTGGCTGACGCCATGCCCGATTACACCAGACTG
TCCGTATTCCTCTCGACTTTAGTGGGTGGTCTGCGATGTGGTGAACTCTGTGGGCTTCAGGTGCAAGACATCGATCTGAA
CAGGCAGATACTTCACGTCCGGCACTCCGTGAATCGCGGTGACGCTGACAGAGGGGATCTCCACTTCGGCAAGACAAAAA
CGGAATCCAGTATCAGGAACGTACACATCCCGGATACGCTGATTCCTCTTATTCGACAGCACCTTTCTGATTACTGCGAT
CTGACCCGACCGGATTCGCCGGTGTTCGTGCCCAAACGTGCAAGAATCATGTCCCAGACAACGCTGGACGGCCAGTTCGC
CAAGGCCCGGCTGAAAGCAGGACGCCCTGATCTGACATTCCAGGCATTACGAGCCAGCCATGCAACATTACTCATGATTC
AGGGTGGAACGTTGCGGGAAGTCATGAATCAATTGGGACACGTCAGTGAGAAGGTGGCTATCCGGTACTACCAGCTCACC
GTCGCCTCACATCAGAGTCAAGTGGTTGACGAGCTTGCCGAATCATTTATGAGCGGCATTCAGCGGCGTGAGTCCTAG

Upstream 100 bases:

>100_bases
CAACGGCTCTTTCAGCATATTCACTTACACTGTTCCTTGGTTTCAATCTCCCCACAAGGCGCACGCGGGGTGCGCCTTTT
CGCGATCGAGGGAGATCAAT

Downstream 100 bases:

>100_bases
ACCAAAGTGATGTACCATCGCGATACGTGGCACACCTTCGTATAGGAAATGCCGTGAGGGATCTGAATCTGGTCCCTCAC
GGCATTTCGGTATCTGGTTG

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MPKIRHSHGNHPQKPPRSKWGTVLARYDRTGMLIAWQVRYPNPLEPGKRVQRQFKPDQELEARRWLEAEKYLVSLHRNGI
AEWVHPTERSRRKAVEEKSRTQRNMLFRDYVMRWAEEYRLPDGNGIAGGTRRNLYLDIGHFLPSLGDLPLNEITPSIIKA
WYDAPHPEGRWAFRRSCMRLKAVLESATRGGLDGSEPLLSFNPFIFHIPPAPQPARINVPPVTPSELILLADAMPDYTRL
SVFLSTLVGGLRCGELCGLQVQDIDLNRQILHVRHSVNRGDADRGDLHFGKTKTESSIRNVHIPDTLIPLIRQHLSDYCD
LTRPDSPVFVPKRARIMSQTTLDGQFAKARLKAGRPDLTFQALRASHATLLMIQGGTLREVMNQLGHVSEKVAIRYYQLT
VASHQSQVVDELAESFMSGIQRRES

Sequences:

>Translated_425_residues
MPKIRHSHGNHPQKPPRSKWGTVLARYDRTGMLIAWQVRYPNPLEPGKRVQRQFKPDQELEARRWLEAEKYLVSLHRNGI
AEWVHPTERSRRKAVEEKSRTQRNMLFRDYVMRWAEEYRLPDGNGIAGGTRRNLYLDIGHFLPSLGDLPLNEITPSIIKA
WYDAPHPEGRWAFRRSCMRLKAVLESATRGGLDGSEPLLSFNPFIFHIPPAPQPARINVPPVTPSELILLADAMPDYTRL
SVFLSTLVGGLRCGELCGLQVQDIDLNRQILHVRHSVNRGDADRGDLHFGKTKTESSIRNVHIPDTLIPLIRQHLSDYCD
LTRPDSPVFVPKRARIMSQTTLDGQFAKARLKAGRPDLTFQALRASHATLLMIQGGTLREVMNQLGHVSEKVAIRYYQLT
VASHQSQVVDELAESFMSGIQRRES
>Mature_424_residues
PKIRHSHGNHPQKPPRSKWGTVLARYDRTGMLIAWQVRYPNPLEPGKRVQRQFKPDQELEARRWLEAEKYLVSLHRNGIA
EWVHPTERSRRKAVEEKSRTQRNMLFRDYVMRWAEEYRLPDGNGIAGGTRRNLYLDIGHFLPSLGDLPLNEITPSIIKAW
YDAPHPEGRWAFRRSCMRLKAVLESATRGGLDGSEPLLSFNPFIFHIPPAPQPARINVPPVTPSELILLADAMPDYTRLS
VFLSTLVGGLRCGELCGLQVQDIDLNRQILHVRHSVNRGDADRGDLHFGKTKTESSIRNVHIPDTLIPLIRQHLSDYCDL
TRPDSPVFVPKRARIMSQTTLDGQFAKARLKAGRPDLTFQALRASHATLLMIQGGTLREVMNQLGHVSEKVAIRYYQLTV
ASHQSQVVDELAESFMSGIQRRES

Specific function: Integrase is necessary for integration of the phage into the host genome by site-specific recombination. In conjunction with excisionase, integrase is also necessary for excision of the prophage from the host genome [H]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 48465; Mature: 48334

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIRHSHGNHPQKPPRSKWGTVLARYDRTGMLIAWQVRYPNPLEPGKRVQRQFKPDQEL
CCCCCCCCCCCCCCCCCHHHHHHHHEECCCCEEEEEEECCCCCCCHHHHHHHHCCCCHHH
EARRWLEAEKYLVSLHRNGIAEWVHPTERSRRKAVEEKSRTQRNMLFRDYVMRWAEEYRL
HHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDGNGIAGGTRRNLYLDIGHFLPSLGDLPLNEITPSIIKAWYDAPHPEGRWAFRRSCMRL
CCCCCCCCCCCCEEEEEHHHHCCCCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHH
KAVLESATRGGLDGSEPLLSFNPFIFHIPPAPQPARINVPPVTPSELILLADAMPDYTRL
HHHHHHHHCCCCCCCCCCEECCCEEEECCCCCCCCEEECCCCCHHHEEEEECCCCCHHHH
SVFLSTLVGGLRCGELCGLQVQDIDLNRQILHVRHSVNRGDADRGDLHFGKTKTESSIRN
HHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCE
VHIPDTLIPLIRQHLSDYCDLTRPDSPVFVPKRARIMSQTTLDGQFAKARLKAGRPDLTF
EECCHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHCCCHHHHHHHHHCCCCCHHH
QALRASHATLLMIQGGTLREVMNQLGHVSEKVAIRYYQLTVASHQSQVVDELAESFMSGI
HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHH
QRRES
HHCCC
>Mature Secondary Structure 
PKIRHSHGNHPQKPPRSKWGTVLARYDRTGMLIAWQVRYPNPLEPGKRVQRQFKPDQEL
CCCCCCCCCCCCCCCCHHHHHHHHEECCCCEEEEEEECCCCCCCHHHHHHHHCCCCHHH
EARRWLEAEKYLVSLHRNGIAEWVHPTERSRRKAVEEKSRTQRNMLFRDYVMRWAEEYRL
HHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDGNGIAGGTRRNLYLDIGHFLPSLGDLPLNEITPSIIKAWYDAPHPEGRWAFRRSCMRL
CCCCCCCCCCCCEEEEEHHHHCCCCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHH
KAVLESATRGGLDGSEPLLSFNPFIFHIPPAPQPARINVPPVTPSELILLADAMPDYTRL
HHHHHHHHCCCCCCCCCCEECCCEEEECCCCCCCCEEECCCCCHHHEEEEECCCCCHHHH
SVFLSTLVGGLRCGELCGLQVQDIDLNRQILHVRHSVNRGDADRGDLHFGKTKTESSIRN
HHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCE
VHIPDTLIPLIRQHLSDYCDLTRPDSPVFVPKRARIMSQTTLDGQFAKARLKAGRPDLTF
EECCHHHHHHHHHHHHHHHCCCCCCCCEECCHHHHHHHHHCCCHHHHHHHHHCCCCCHHH
QALRASHATLLMIQGGTLREVMNQLGHVSEKVAIRYYQLTVASHQSQVVDELAESFMSGI
HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHHHHH
QRRES
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]