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The map label for this gene is amyC [H]

Identifier: 213691290

GI number: 213691290

Start: 437541

End: 438374

Strand: Direct

Name: amyC [H]

Synonym: Blon_0377

Alternate gene names: 213691290

Gene position: 437541-438374 (Clockwise)

Preceding gene: 213691289

Following gene: 213691291

Centisome position: 15.45

GC content: 56.0

Gene sequence:

>834_bases
ATGACACCGTCTCAGCGTGAACTCGTTCGCAAAATCTTTCGCACCATCGTGGTGCTTGGCCTGGCCCTGATTTGCGCCGT
GCCACTGTACTATGTGATCGTCAGCTCCTTCAAGACCTCAATCGATATGATCAAGAACCCATTGGGGCTTCCGGAGCAGT
GGACGCTGGAGAACTACAAGGAGGCCTTCGCCGACGGCACCATCATTCGTGCGTTCGTCAACACGCTGATTGTCACCGTG
GTGGCGGTGCTGCTGCAGGTTCTGGTCGGTTCGATGGCCGCATTCGGTGTGGTATACAAGAAATCCAAGTTCACCGCCAT
CGTCGGTGGCGTACTGATGGTCACCTTCGCCATTCCTGTGCAGGCCACAATGCTGCCGCTGTACCGCATGGAGTCCGAGA
CCGGACTTGTGGATTCGCTGCTTGGCTTGATTGTGCTGTATATGGGCTCGTGTGTGTTCTGCTACTTCCTGATCGTCGGC
TACATGAAGTCCCTGCCACAGGAATTGTTCGAAGCGGCCAAAATCGACGGTGCCGGCCCATGGCGCATCTACTCGCGCAT
CGTGTTGCCGCTGATCACCCCAATATTGACCACCGTCGTCGTATTCCAAACCATGGGCACTTGGAACGACTTCCTCCTGC
CGAGTGTGTTCCTCAGCTCCACGGATAACCAGACCGTCGTGCTGCAGGTATACAACGCCGTGCAGCAGTTCTCCACGAAC
TGGCCTCTGTTCATGACTATCACGGTGCTTGCCCTGGTTCCGGTGTTCATTTTCTTCTGCTTCTGCCAGAAGTGGATTGT
CTCCGGGTTGGTTGCCGGCTCCGTTAAGGGCTGA

Upstream 100 bases:

>100_bases
ACGGACTGGGCTCGGCGTTGTCCGTATGCTTCACCATCGCCTGCATTCTCGTCATCGCCGCGCAGACCGGCATTGCCAAC
GCCGTGGAAAAGAGGTTCCA

Downstream 100 bases:

>100_bases
GGACGAAATGAGATCAGTCATGAGTGACGTACAGAATGCTGCACAGCAAGCCGCTATCGAACGTGCTACTGCAGAAGCCG
GTGCCTCAACGGATTTCTCT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MTPSQRELVRKIFRTIVVLGLALICAVPLYYVIVSSFKTSIDMIKNPLGLPEQWTLENYKEAFADGTIIRAFVNTLIVTV
VAVLLQVLVGSMAAFGVVYKKSKFTAIVGGVLMVTFAIPVQATMLPLYRMESETGLVDSLLGLIVLYMGSCVFCYFLIVG
YMKSLPQELFEAAKIDGAGPWRIYSRIVLPLITPILTTVVVFQTMGTWNDFLLPSVFLSSTDNQTVVLQVYNAVQQFSTN
WPLFMTITVLALVPVFIFFCFCQKWIVSGLVAGSVKG

Sequences:

>Translated_277_residues
MTPSQRELVRKIFRTIVVLGLALICAVPLYYVIVSSFKTSIDMIKNPLGLPEQWTLENYKEAFADGTIIRAFVNTLIVTV
VAVLLQVLVGSMAAFGVVYKKSKFTAIVGGVLMVTFAIPVQATMLPLYRMESETGLVDSLLGLIVLYMGSCVFCYFLIVG
YMKSLPQELFEAAKIDGAGPWRIYSRIVLPLITPILTTVVVFQTMGTWNDFLLPSVFLSSTDNQTVVLQVYNAVQQFSTN
WPLFMTITVLALVPVFIFFCFCQKWIVSGLVAGSVKG
>Mature_276_residues
TPSQRELVRKIFRTIVVLGLALICAVPLYYVIVSSFKTSIDMIKNPLGLPEQWTLENYKEAFADGTIIRAFVNTLIVTVV
AVLLQVLVGSMAAFGVVYKKSKFTAIVGGVLMVTFAIPVQATMLPLYRMESETGLVDSLLGLIVLYMGSCVFCYFLIVGY
MKSLPQELFEAAKIDGAGPWRIYSRIVLPLITPILTTVVVFQTMGTWNDFLLPSVFLSSTDNQTVVLQVYNAVQQFSTNW
PLFMTITVLALVPVFIFFCFCQKWIVSGLVAGSVKG

Specific function: Probably part of a binding-protein-dependent transport system starch degradation products. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=284, Percent_Identity=30.6338028169014, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789860, Length=267, Percent_Identity=27.3408239700375, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1790464, Length=249, Percent_Identity=25.7028112449799, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30675; Mature: 30544

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSQRELVRKIFRTIVVLGLALICAVPLYYVIVSSFKTSIDMIKNPLGLPEQWTLENYK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
EAFADGTIIRAFVNTLIVTVVAVLLQVLVGSMAAFGVVYKKSKFTAIVGGVLMVTFAIPV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QATMLPLYRMESETGLVDSLLGLIVLYMGSCVFCYFLIVGYMKSLPQELFEAAKIDGAGP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
WRIYSRIVLPLITPILTTVVVFQTMGTWNDFLLPSVFLSSTDNQTVVLQVYNAVQQFSTN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
WPLFMTITVLALVPVFIFFCFCQKWIVSGLVAGSVKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TPSQRELVRKIFRTIVVLGLALICAVPLYYVIVSSFKTSIDMIKNPLGLPEQWTLENYK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
EAFADGTIIRAFVNTLIVTVVAVLLQVLVGSMAAFGVVYKKSKFTAIVGGVLMVTFAIPV
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QATMLPLYRMESETGLVDSLLGLIVLYMGSCVFCYFLIVGYMKSLPQELFEAAKIDGAGP
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
WRIYSRIVLPLITPILTTVVVFQTMGTWNDFLLPSVFLSSTDNQTVVLQVYNAVQQFSTN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
WPLFMTITVLALVPVFIFFCFCQKWIVSGLVAGSVKG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1874408; 1854207 [H]