| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is pepC [H]
Identifier: 213691272
GI number: 213691272
Start: 412699
End: 414042
Strand: Direct
Name: pepC [H]
Synonym: Blon_0356
Alternate gene names: 213691272
Gene position: 412699-414042 (Clockwise)
Preceding gene: 213691271
Following gene: 213691273
Centisome position: 14.57
GC content: 62.05
Gene sequence:
>1344_bases ATGAGTGAATTGACGCCTCTGACCGGCGAAGCATTGAATACCCTGCGCGGCGATTTCGCACAGAGTGGCACCAACCGTCT GGCCATGAACGCGGTGACCGCCGCCGGCATCGACAAGGTGGCTCGCAATTATGACCGCGCTCGTCTGATGCAGCGCCGTT TCTCCACCATCGTTGACAATGGCGAAGCCACCCATCAGGATCGCTCCGGCCGCTGCTGGCTGTTCAGCTCCCTGAACGTG GCCCGTTTCGTGGCCAAGAAGAACATGAACTTGAAGGAGTTCGAGTTCTCCCAGAACTACGCGATGTACTACGACAAGCT GGAGCGCGTCAACTACTTCCTTAAGGATGTGGCCGCTCTGGTGGCTGCCGGGGAGCCGTCCGACTCCCGCCTGATGCAGC ACCTGCTCGCCGACGTGATGGGCGATGGCGGCCAGTGGACCATGGCCATGAACGTGTACAAGAAGTACGGCGCTGTGCCC AAGGACCTGTTCCCGGAGACCGAATCCTCCAAGAACACCGGTGAGATGAACACCCAGCTGCGCCACATGCTGCACACCGC CGTGGCGCACATGTACGCCGCTGACGGCGATGCCTCCAAGGTCGAGGCGATTATTGCCGACGCCACTGCTGCCGGCCACC GTATTCTGACCATCCACCTGGGCGAGCCGCCGGTCTCCTTCGACTGGGAATGGACCGACAAGGATGGCGAATTCCACCGC GACGGCGAGATCACGCCGGTCGAATTCTGGAAGAAGTACGTGGGACCGGCCGGTCTCGAGGACTACGTGTGCCTGGTGGA TGATCCGCGCACCGAGCACGCCAAGGGCAAGAAGATCGGCATCGAGCACCTCGGCAATGTGGCTGGCGGCGACGCCACCG AGTACCTCAACGTGCCAAACCAGTTCATGAAGGACTGTGTCAAGCAGATTCTCGTTGAGCAGGGCATCCCGGTATGGTTC GGTGCCGACTGCCACCCGTTCATGGACCGTGAGAACGGCGCTTGGGCCACCGACCTGTTCGAGTACGGCCGCGTGTACGA CGTGGACTTCGATTTGGACAAGGAAGCCCGCGTGCGCTTCGGTGACTCCGCCATGAACCACGCCATGGCCTTCGCCGGCG TGGACGTCGCCGATGACGGCTCCACGCGGCGCTGGCGTGTGGAGAACTCCTGGGGTGCCAAGATCGCCGACAAGGGCTAC TTCACCATGTCCGACGACTGGTTCACCGAATACGTCTACGAGGTCGCCGTCCCCAAGGCCATGCTTCCCGAAGAGTACCG CAAGGCCTTGGAATCCCCGGCCACCATGCTCCCCGCATGGGATCCGATGGGCGCGCTCGCATAA
Upstream 100 bases:
>100_bases GACTACTAGCGGTAAGAATTACGGCACCTGCGCTTTCGAGCCAGGTGCCGTATTCGTTTGGATCTGCGCCGCAAGCGCAC CATCACAGAAGGAGTATGAC
Downstream 100 bases:
>100_bases GAGGGCGTATGGGCTTGACGGGTGGGCGCCGCCCGTCAAGCCCGGCGCCGCCGCAGACGGTCCATAATCGCCGGCCCCGC CAGCGGTGCCGGCGGCGAAC
Product: Bleomycin hydrolase
Products: NA
Alternate protein names: Bleomycin hydrolase [H]
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSELTPLTGEALNTLRGDFAQSGTNRLAMNAVTAAGIDKVARNYDRARLMQRRFSTIVDNGEATHQDRSGRCWLFSSLNV ARFVAKKNMNLKEFEFSQNYAMYYDKLERVNYFLKDVAALVAAGEPSDSRLMQHLLADVMGDGGQWTMAMNVYKKYGAVP KDLFPETESSKNTGEMNTQLRHMLHTAVAHMYAADGDASKVEAIIADATAAGHRILTIHLGEPPVSFDWEWTDKDGEFHR DGEITPVEFWKKYVGPAGLEDYVCLVDDPRTEHAKGKKIGIEHLGNVAGGDATEYLNVPNQFMKDCVKQILVEQGIPVWF GADCHPFMDRENGAWATDLFEYGRVYDVDFDLDKEARVRFGDSAMNHAMAFAGVDVADDGSTRRWRVENSWGAKIADKGY FTMSDDWFTEYVYEVAVPKAMLPEEYRKALESPATMLPAWDPMGALA
Sequences:
>Translated_447_residues MSELTPLTGEALNTLRGDFAQSGTNRLAMNAVTAAGIDKVARNYDRARLMQRRFSTIVDNGEATHQDRSGRCWLFSSLNV ARFVAKKNMNLKEFEFSQNYAMYYDKLERVNYFLKDVAALVAAGEPSDSRLMQHLLADVMGDGGQWTMAMNVYKKYGAVP KDLFPETESSKNTGEMNTQLRHMLHTAVAHMYAADGDASKVEAIIADATAAGHRILTIHLGEPPVSFDWEWTDKDGEFHR DGEITPVEFWKKYVGPAGLEDYVCLVDDPRTEHAKGKKIGIEHLGNVAGGDATEYLNVPNQFMKDCVKQILVEQGIPVWF GADCHPFMDRENGAWATDLFEYGRVYDVDFDLDKEARVRFGDSAMNHAMAFAGVDVADDGSTRRWRVENSWGAKIADKGY FTMSDDWFTEYVYEVAVPKAMLPEEYRKALESPATMLPAWDPMGALA >Mature_446_residues SELTPLTGEALNTLRGDFAQSGTNRLAMNAVTAAGIDKVARNYDRARLMQRRFSTIVDNGEATHQDRSGRCWLFSSLNVA RFVAKKNMNLKEFEFSQNYAMYYDKLERVNYFLKDVAALVAAGEPSDSRLMQHLLADVMGDGGQWTMAMNVYKKYGAVPK DLFPETESSKNTGEMNTQLRHMLHTAVAHMYAADGDASKVEAIIADATAAGHRILTIHLGEPPVSFDWEWTDKDGEFHRD GEITPVEFWKKYVGPAGLEDYVCLVDDPRTEHAKGKKIGIEHLGNVAGGDATEYLNVPNQFMKDCVKQILVEQGIPVWFG ADCHPFMDRENGAWATDLFEYGRVYDVDFDLDKEARVRFGDSAMNHAMAFAGVDVADDGSTRRWRVENSWGAKIADKGYF TMSDDWFTEYVYEVAVPKAMLPEEYRKALESPATMLPAWDPMGALA
Specific function: Unknown
COG id: COG3579
COG function: function code E; Aminopeptidase C
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C1 family [H]
Homologues:
Organism=Homo sapiens, GI4557367, Length=394, Percent_Identity=41.6243654822335, Blast_Score=324, Evalue=8e-89, Organism=Saccharomyces cerevisiae, GI6324090, Length=455, Percent_Identity=36.2637362637363, Blast_Score=265, Evalue=8e-72, Organism=Drosophila melanogaster, GI161077632, Length=455, Percent_Identity=35.3846153846154, Blast_Score=291, Evalue=5e-79, Organism=Drosophila melanogaster, GI24640588, Length=455, Percent_Identity=35.3846153846154, Blast_Score=291, Evalue=6e-79, Organism=Drosophila melanogaster, GI161077630, Length=367, Percent_Identity=37.3297002724796, Blast_Score=258, Evalue=6e-69, Organism=Drosophila melanogaster, GI20130175, Length=464, Percent_Identity=26.5086206896552, Blast_Score=150, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000169 - InterPro: IPR004134 [H]
Pfam domain/function: PF03051 Peptidase_C1_2 [H]
EC number: =3.4.22.40 [H]
Molecular weight: Translated: 50134; Mature: 50003
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00139 THIOL_PROTEASE_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELTPLTGEALNTLRGDFAQSGTNRLAMNAVTAAGIDKVARNYDRARLMQRRFSTIVDN CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GEATHQDRSGRCWLFSSLNVARFVAKKNMNLKEFEFSQNYAMYYDKLERVNYFLKDVAAL CCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH VAAGEPSDSRLMQHLLADVMGDGGQWTMAMNVYKKYGAVPKDLFPETESSKNTGEMNTQL HHCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHH RHMLHTAVAHMYAADGDASKVEAIIADATAAGHRILTIHLGEPPVSFDWEWTDKDGEFHR HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCC DGEITPVEFWKKYVGPAGLEDYVCLVDDPRTEHAKGKKIGIEHLGNVAGGDATEYLNVPN CCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEECHHHHCCCCCCCHHHHHCCCH QFMKDCVKQILVEQGIPVWFGADCHPFMDRENGAWATDLFEYGRVYDVDFDLDKEARVRF HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCHHHEEE GDSAMNHAMAFAGVDVADDGSTRRWRVENSWGAKIADKGYFTMSDDWFTEYVYEVAVPKA CCHHHHHHHHHCCCEECCCCCCCEEEECCCCCCEEECCCCEEECCHHHHHHHHHHHCCHH MLPEEYRKALESPATMLPAWDPMGALA CCCHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SELTPLTGEALNTLRGDFAQSGTNRLAMNAVTAAGIDKVARNYDRARLMQRRFSTIVDN CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GEATHQDRSGRCWLFSSLNVARFVAKKNMNLKEFEFSQNYAMYYDKLERVNYFLKDVAAL CCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH VAAGEPSDSRLMQHLLADVMGDGGQWTMAMNVYKKYGAVPKDLFPETESSKNTGEMNTQL HHCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHH RHMLHTAVAHMYAADGDASKVEAIIADATAAGHRILTIHLGEPPVSFDWEWTDKDGEFHR HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCC DGEITPVEFWKKYVGPAGLEDYVCLVDDPRTEHAKGKKIGIEHLGNVAGGDATEYLNVPN CCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEECHHHHCCCCCCCHHHHHCCCH QFMKDCVKQILVEQGIPVWFGADCHPFMDRENGAWATDLFEYGRVYDVDFDLDKEARVRF HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCHHHEEE GDSAMNHAMAFAGVDVADDGSTRRWRVENSWGAKIADKGYFTMSDDWFTEYVYEVAVPKA CCHHHHHHHHHCCCEECCCCCCCEEEECCCCCCEEECCCCEEECCHHHHHHHHHHHCCHH MLPEEYRKALESPATMLPAWDPMGALA CCCHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7851736 [H]