Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is ydjK [C]

Identifier: 213691261

GI number: 213691261

Start: 399536

End: 400759

Strand: Direct

Name: ydjK [C]

Synonym: Blon_0345

Alternate gene names: 213691261

Gene position: 399536-400759 (Clockwise)

Preceding gene: 213691260

Following gene: 213691262

Centisome position: 14.1

GC content: 45.59

Gene sequence:

>1224_bases
ATGTCAAAAATAATTAATTATAGTGAAGTACTGGAATCCAAACGTCTGATGGTTGGCGTCTTGTCGGTGTCTTTCTTATT
GTCCGCTGGTAATGCTATTAGCGGAACGATTCCCGCGATGGAAGAAGCGTTCTCGAATATTTCGAAAGCCAATATTGAGA
CACTAACGACCATACCGACAGCGGGAATTATGCTCGGAACCGTCCTCTCGGGTGTTTTCTCGAATTATCTAGGAAAAAAG
AAATCCGTGCTCGCGGGTTTGATTATCGCTTTGGTTGGCGGTGTTATCCCCGCGTTCCTGCCTCAATACTGGCCAATCTT
TATTTCGCGTTTCCTCTTTGGCGTGGGCATGGGTATCTTTAATCCGCTTTCTGTGTCCTATATCACCGATCTGTATGTGG
GGGATCGTCAGCGTAGTCTTCTTGGATACCGCAATGCGGTTAGCAATCTGGGTGATACCATCATGCTTTTCGTTGCTGGT
ATCTTGATTACCTTTGGTTGGAATATCACCTATCTGGTCTTCTTCGCCTTGCTGATACCGATTGTTTTAATAATTTTGTT
CGTTCCAAAGGAATTCGATAATTTCGATATCAGGAACAGTGCTCTGGATGAGAATGGTCAGATTAGTGACAGTGTGTCTG
ATGTCAAACCATCTACGAATCTCAAGGTGATCGAGGTTGGCGTTGTATTTATGGTTATCACTATGCTATATAACGCGATC
CCGCTGAAATTTGCGAGCTATATTGTCACGGAGCATATCGGCACTGCCTCGACCGCCACATGGATCTTCAGCTTCCTGGT
CTTGGCGGGCATTTTCTCCGGCGTGCTGTTCGAGAAGATTTCCAAGGTTTTCAAGCGTTTGACGGTGTTCGTATTCGAGA
TTGTTATTGGCGTCGCCTATATCACGATTGCGTTCACCTACAACATTCCGTTGCTGACGGCTTTGGTGTTGATCTCTGGC
TTTGGTTGGGGTATTATCAACCCGGCATTGACAGCGCGACTCGTAGATGTGTCGCCGATTAACTCTATGAATCTGAGTAC
TTCAATAATTGTTATCTTTATCAGTGTTGGTTCTCTTATTTCCCCGTACTTCTTCGCAATGTTCGCGGGCTTGTTCGGTA
ACGATTCGGCTGCGTTCGCTATTGTTGTCGGTGGTGCCCTGTATGTGGTCATGGCCGTGCTTGATTTCATCAAAATAAAG
AAGAACAAGGAGCTGAGCATCTGA

Upstream 100 bases:

>100_bases
TCAATGTGGGTAGGTGAAGGAGATATACGCAAGAATATCTAAGATATAAGTTCAAATTCTTAATCTTTTCAATGTTGATT
TATATGTGTCTGGAGTGATA

Downstream 100 bases:

>100_bases
TTGATTCGTGGTTGGAATCGTTGACGACGATTCCAACCCGGCAATCGGAAGCCGTTCCATCGCAACAAAGGAGTTCAATG
ATGTCCACCGCAACTGGTTT

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Transporter Protein; Permease Of Facilitator Superfamily; Facilitator Superfamily Transporter Permease; General Substrate Transporter Facilitator Superfamily; MFS Family Transporter Protein; Permease; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; MFS Family Transporter; Multidrug Efflux Permease; Facilitator Family Protein; Facilitator Superfamily Transporter Efflux Protein; Ypothetical Protein SMU.

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MSKIINYSEVLESKRLMVGVLSVSFLLSAGNAISGTIPAMEEAFSNISKANIETLTTIPTAGIMLGTVLSGVFSNYLGKK
KSVLAGLIIALVGGVIPAFLPQYWPIFISRFLFGVGMGIFNPLSVSYITDLYVGDRQRSLLGYRNAVSNLGDTIMLFVAG
ILITFGWNITYLVFFALLIPIVLIILFVPKEFDNFDIRNSALDENGQISDSVSDVKPSTNLKVIEVGVVFMVITMLYNAI
PLKFASYIVTEHIGTASTATWIFSFLVLAGIFSGVLFEKISKVFKRLTVFVFEIVIGVAYITIAFTYNIPLLTALVLISG
FGWGIINPALTARLVDVSPINSMNLSTSIIVIFISVGSLISPYFFAMFAGLFGNDSAAFAIVVGGALYVVMAVLDFIKIK
KNKELSI

Sequences:

>Translated_407_residues
MSKIINYSEVLESKRLMVGVLSVSFLLSAGNAISGTIPAMEEAFSNISKANIETLTTIPTAGIMLGTVLSGVFSNYLGKK
KSVLAGLIIALVGGVIPAFLPQYWPIFISRFLFGVGMGIFNPLSVSYITDLYVGDRQRSLLGYRNAVSNLGDTIMLFVAG
ILITFGWNITYLVFFALLIPIVLIILFVPKEFDNFDIRNSALDENGQISDSVSDVKPSTNLKVIEVGVVFMVITMLYNAI
PLKFASYIVTEHIGTASTATWIFSFLVLAGIFSGVLFEKISKVFKRLTVFVFEIVIGVAYITIAFTYNIPLLTALVLISG
FGWGIINPALTARLVDVSPINSMNLSTSIIVIFISVGSLISPYFFAMFAGLFGNDSAAFAIVVGGALYVVMAVLDFIKIK
KNKELSI
>Mature_406_residues
SKIINYSEVLESKRLMVGVLSVSFLLSAGNAISGTIPAMEEAFSNISKANIETLTTIPTAGIMLGTVLSGVFSNYLGKKK
SVLAGLIIALVGGVIPAFLPQYWPIFISRFLFGVGMGIFNPLSVSYITDLYVGDRQRSLLGYRNAVSNLGDTIMLFVAGI
LITFGWNITYLVFFALLIPIVLIILFVPKEFDNFDIRNSALDENGQISDSVSDVKPSTNLKVIEVGVVFMVITMLYNAIP
LKFASYIVTEHIGTASTATWIFSFLVLAGIFSGVLFEKISKVFKRLTVFVFEIVIGVAYITIAFTYNIPLLTALVLISGF
GWGIINPALTARLVDVSPINSMNLSTSIIVIFISVGSLISPYFFAMFAGLFGNDSAAFAIVVGGALYVVMAVLDFIKIKK
NKELSI

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44136; Mature: 44005

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SKIINYSEVLESKRLMVGVLSVSFLLSAGNAISGTIPAMEEAFSNISKANIETLTTIPT
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCH
AGIMLGTVLSGVFSNYLGKKKSVLAGLIIALVGGVIPAFLPQYWPIFISRFLFGVGMGIF
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NPLSVSYITDLYVGDRQRSLLGYRNAVSNLGDTIMLFVAGILITFGWNITYLVFFALLIP
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
IVLIILFVPKEFDNFDIRNSALDENGQISDSVSDVKPSTNLKVIEVGVVFMVITMLYNAI
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEHHHHHHHHHHHHHHHH
PLKFASYIVTEHIGTASTATWIFSFLVLAGIFSGVLFEKISKVFKRLTVFVFEIVIGVAY
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITIAFTYNIPLLTALVLISGFGWGIINPALTARLVDVSPINSMNLSTSIIVIFISVGSLI
HHHHHHCCHHHHHHHHHHHCCCCHHCCHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHH
SPYFFAMFAGLFGNDSAAFAIVVGGALYVVMAVLDFIKIKKNKELSI
HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA