| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691246
Identifier: 213691246
GI number: 213691246
Start: 381587
End: 382999
Strand: Reverse
Name: 213691246
Synonym: Blon_0329
Alternate gene names: NA
Gene position: 382999-381587 (Counterclockwise)
Preceding gene: 213691247
Following gene: 213691245
Centisome position: 13.52
GC content: 60.44
Gene sequence:
>1413_bases ATGACCGGCATTATCGATTACGCGCACACCGAAACGCGCTCCTTCGCCGACTTGCCGTTCAACGAAATCGACGCCTTGAT CATCTCCACGCTCATCTATGAGGATGTGGCCAGTATCTGCCCGACGTTGATGCTGGATGAGACGCGGTCAGGCTCGTTCG CCGCACGCATTCGCGCTTTCGAGCCCAAGCATCCACTGATCTGGTTGAAGGGTATCTGGCATCCCGAGCTTGAATCGGTA AGCCTTGACGAGGCCAACCGCGAGCTGCATCGTTCGCCGAAAACGCATGCCGACGACAAGCCGCACGAAGCCCAAATGGT TTCAGTGGTCAATCCGGACCTGACCCACGACCTGTTCCAGGCCGCAGGCGAGAACCCCCGCTACGCCAACGTTCGCCTGG GCGCGGTGGTCGAGCGCATCAATCAGGGCGAGCAAACCCAATTCGCCGCCGCCACCTTCCAACTGCCCGACGGCCACAAG CGCCGGAAGCCGACCTACAAAGGCACGTTGGTTATTTCCTTCCGCGGTACCGATGATTCGCTCATCGGATGGAAGGAAGA TTTCAATATGGCTTTCCAGTATCCGGTGCCGGCGCAACGTTCAGCCAGCGCCTATCTGGATACGGTGGCGCGACTGTGGG AAGGTCCGATTATTCTGGTCGGCCATTCCAAGGGAGGCAACCTGGCGATTTACGCGGCCATGAACGCCGACCCCAAGGTG CGCAAGCGCATTCAGCATGTCTATTCACTGGACGGCCCCGGTTTCCCGCCGGAGATTGTGACCAGCCCCGCCTACCGCAC CATCCAGCCGAAGGTGACGAAAATCGTGCCAAGTTCGTCGATTGTGGGCATGATTTTCGAGACCCCGGAGCCTTGCCGCG TGGTCTCTTCCGATTCGGATGGCATCATGCAGCATTCCGCCTTCACCTGGCTATTGGATGGTGACCAGTTCATCACCGAG CCGGATTTGAGTTCCAGCTCGCAGTTGTTTAACGAGGAGCTGAACCATTGGATCGCCACGCTTACGCCCGAACAGCGCAA GCGTGCGGTGGACGCGCTGTTCACCGTGCTGCACGCCAACGGCGCCACCAGTTTCAGCGAGGTGATGAGCAACTTCCCCG CTTCGATTCCGGCGATGCTTGGCGCGTATGTAGGGCTGACCCCCGCAGACCGGCGTCATTTGGTTGAGGCCCTGGCGATA CTGTTCAAGGCGTCCACGGCCAAACGCAGGCCGACGCCCGCCCCAGCTTCCGCACCAAGTTCTGCGACCGCCAAAGGAAC AGCCGAGACCCCAGCAGGAACCGCGACAGGAACCGCGACAGGAACAGATAGAGCGGCCCCGGCCAGAGCCGATACCGATG CCGGCACCGCAGCTTCGCCCTCAGCGGAGGACGCAACTGAAATCGCCGATTAG
Upstream 100 bases:
>100_bases GCATATGGTTAATTGCTGCGCGCAGCCGCACGGCCGCACGCGATCGCAAGACCACATGACCCAAGGGGATATGCAATATC AACGGAAGCAGGAGGTGCGT
Downstream 100 bases:
>100_bases CTCATAGACATGTCCACAAATAATAGTTATACTGCCCAATAAGTTATTAGACAGCGTGACCATATCACGCTGGTGCATCA GGAGGAAGAGATGCCACGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MTGIIDYAHTETRSFADLPFNEIDALIISTLIYEDVASICPTLMLDETRSGSFAARIRAFEPKHPLIWLKGIWHPELESV SLDEANRELHRSPKTHADDKPHEAQMVSVVNPDLTHDLFQAAGENPRYANVRLGAVVERINQGEQTQFAAATFQLPDGHK RRKPTYKGTLVISFRGTDDSLIGWKEDFNMAFQYPVPAQRSASAYLDTVARLWEGPIILVGHSKGGNLAIYAAMNADPKV RKRIQHVYSLDGPGFPPEIVTSPAYRTIQPKVTKIVPSSSIVGMIFETPEPCRVVSSDSDGIMQHSAFTWLLDGDQFITE PDLSSSSQLFNEELNHWIATLTPEQRKRAVDALFTVLHANGATSFSEVMSNFPASIPAMLGAYVGLTPADRRHLVEALAI LFKASTAKRRPTPAPASAPSSATAKGTAETPAGTATGTATGTDRAAPARADTDAGTAASPSAEDATEIAD
Sequences:
>Translated_470_residues MTGIIDYAHTETRSFADLPFNEIDALIISTLIYEDVASICPTLMLDETRSGSFAARIRAFEPKHPLIWLKGIWHPELESV SLDEANRELHRSPKTHADDKPHEAQMVSVVNPDLTHDLFQAAGENPRYANVRLGAVVERINQGEQTQFAAATFQLPDGHK RRKPTYKGTLVISFRGTDDSLIGWKEDFNMAFQYPVPAQRSASAYLDTVARLWEGPIILVGHSKGGNLAIYAAMNADPKV RKRIQHVYSLDGPGFPPEIVTSPAYRTIQPKVTKIVPSSSIVGMIFETPEPCRVVSSDSDGIMQHSAFTWLLDGDQFITE PDLSSSSQLFNEELNHWIATLTPEQRKRAVDALFTVLHANGATSFSEVMSNFPASIPAMLGAYVGLTPADRRHLVEALAI LFKASTAKRRPTPAPASAPSSATAKGTAETPAGTATGTATGTDRAAPARADTDAGTAASPSAEDATEIAD >Mature_469_residues TGIIDYAHTETRSFADLPFNEIDALIISTLIYEDVASICPTLMLDETRSGSFAARIRAFEPKHPLIWLKGIWHPELESVS LDEANRELHRSPKTHADDKPHEAQMVSVVNPDLTHDLFQAAGENPRYANVRLGAVVERINQGEQTQFAAATFQLPDGHKR RKPTYKGTLVISFRGTDDSLIGWKEDFNMAFQYPVPAQRSASAYLDTVARLWEGPIILVGHSKGGNLAIYAAMNADPKVR KRIQHVYSLDGPGFPPEIVTSPAYRTIQPKVTKIVPSSSIVGMIFETPEPCRVVSSDSDGIMQHSAFTWLLDGDQFITEP DLSSSSQLFNEELNHWIATLTPEQRKRAVDALFTVLHANGATSFSEVMSNFPASIPAMLGAYVGLTPADRRHLVEALAIL FKASTAKRRPTPAPASAPSSATAKGTAETPAGTATGTATGTDRAAPARADTDAGTAASPSAEDATEIAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50974; Mature: 50843
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00120 LIPASE_SER ; PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIIDYAHTETRSFADLPFNEIDALIISTLIYEDVASICPTLMLDETRSGSFAARIRAF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEC EPKHPLIWLKGIWHPELESVSLDEANRELHRSPKTHADDKPHEAQMVSVVNPDLTHDLFQ CCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHH AAGENPRYANVRLGAVVERINQGEQTQFAAATFQLPDGHKRRKPTYKGTLVISFRGTDDS HCCCCCCEEEEHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCC LIGWKEDFNMAFQYPVPAQRSASAYLDTVARLWEGPIILVGHSKGGNLAIYAAMNADPKV CCCCHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCHHH RKRIQHVYSLDGPGFPPEIVTSPAYRTIQPKVTKIVPSSSIVGMIFETPEPCRVVSSDSD HHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHEECCCCCEEEEEECCCCCCEEECCCCC GIMQHSAFTWLLDGDQFITEPDLSSSSQLFNEELNHWIATLTPEQRKRAVDALFTVLHAN CCEECCEEEEEECCCCEECCCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCC GATSFSEVMSNFPASIPAMLGAYVGLTPADRRHLVEALAILFKASTAKRRPTPAPASAPS CCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SATAKGTAETPAGTATGTATGTDRAAPARADTDAGTAASPSAEDATEIAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure TGIIDYAHTETRSFADLPFNEIDALIISTLIYEDVASICPTLMLDETRSGSFAARIRAF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEC EPKHPLIWLKGIWHPELESVSLDEANRELHRSPKTHADDKPHEAQMVSVVNPDLTHDLFQ CCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHH AAGENPRYANVRLGAVVERINQGEQTQFAAATFQLPDGHKRRKPTYKGTLVISFRGTDDS HCCCCCCEEEEHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCC LIGWKEDFNMAFQYPVPAQRSASAYLDTVARLWEGPIILVGHSKGGNLAIYAAMNADPKV CCCCHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCHHH RKRIQHVYSLDGPGFPPEIVTSPAYRTIQPKVTKIVPSSSIVGMIFETPEPCRVVSSDSD HHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHEECCCCCEEEEEECCCCCCEEECCCCC GIMQHSAFTWLLDGDQFITEPDLSSSSQLFNEELNHWIATLTPEQRKRAVDALFTVLHAN CCEECCEEEEEECCCCEECCCCCCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHCC GATSFSEVMSNFPASIPAMLGAYVGLTPADRRHLVEALAILFKASTAKRRPTPAPASAPS CCCHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SATAKGTAETPAGTATGTATGTDRAAPARADTDAGTAASPSAEDATEIAD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA