| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691242
Identifier: 213691242
GI number: 213691242
Start: 377171
End: 378214
Strand: Direct
Name: 213691242
Synonym: Blon_0325
Alternate gene names: NA
Gene position: 377171-378214 (Clockwise)
Preceding gene: 213691241
Following gene: 213691249
Centisome position: 13.31
GC content: 55.27
Gene sequence:
>1044_bases ATGAGCAAACCAATGCCGCCGGCGCAGCAGCCGCAGGTACCTGAGCGACCACAGCAGCCGCAACAAACCCCGCGCGATTG GTGGTTCACGGCCCATCGCCGGTTTTCGACAATCGGCTCGGCGCTCGCCATTATGATGGTGTTCTGGATCGGACTGAATA TTCTGGCCACTGAAGCACTACGAACGCTGCTTGGCGCCGATGTGCCCGCTTGGGCTGTGTTGCTCGCCTCCTCCGGGCCG CTGTATGTGGTGGCCATGCCGCTGAGTATGTTGGCTTTCACTCGCGTACCGGTTATTCGCACCCGGCAGTACCCCATGAA GGCGGGGGAGTTCATTCAGATTTTCGTCATGTGCATTCCGGTAATGCTCTTGGGCAATATGATTGGCAATATATTGTCTG CCGGAGCCACTGATGGTCAGGCCACCAATCGCATCAACGACGTGATTCTTGGCAGCGACTGGCGGGTGAACGCATTGTTC ATAGGCCTGTTGGCACCGGTTTGCGAAGAATGGATTTTTCGCAAGGAGATTATCTCCCGCCTGCGCCGGTACGGAGAAAA GACCGCAATCATGTTCTCCGCATTGGCATTCGCGCTATTCCATATGAACGTGTTCCAGTTCTTCTACGCCTTTGGCCTAG GACTGATGTTCGGATATGTATACACACGCACCTCCCGACTGCGGTATTCAGTGGCTATGCACATGCTGATCAACCTGAAC GGGTCAGTACTCGCCCCATTGGTGATACAACAGATCGATCCCCGCATCCTCGACGGCACAATCAGCGAGGCCGAAATCAT GCGTATGGCTGAAACCGGCAACATGGGCGGCATGGGCATCATGATGTTGTACGGCACAGTGATGTTGGGCCTCTGCATTG CCGGTATCGTGCTGCTTATCACCAAGCGCAAGATCTGGGAGTTCTATCTTGCGCCAGAGGAGTTGCCTGCTGGGCTTAAA ATACGCACCGCCTATGCCAATCCCGGCGTTATCTCGTACCTACTGTTGACTGTGATTCTCACCGGTTGGATGCTGTTCGC ATGA
Upstream 100 bases:
>100_bases CCTCCCCATTCCCAATGCAATCGAAACGCCGTGCCGTATTCTTGAAGAGTATTGCACGTGTGATCGGTCCGTTTGCGGCC AGTAACTATGGGGGATAAGT
Downstream 100 bases:
>100_bases CTGTCATAGCCGGACCCAGAGAGGCGAGCCGGGAGATATCACAGATTGTCTGACGAGCCGCCATCTTCAACAAGGTATTT GGTGCCCGAGCCGGCGATGG
Product: Abortive infection protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MSKPMPPAQQPQVPERPQQPQQTPRDWWFTAHRRFSTIGSALAIMMVFWIGLNILATEALRTLLGADVPAWAVLLASSGP LYVVAMPLSMLAFTRVPVIRTRQYPMKAGEFIQIFVMCIPVMLLGNMIGNILSAGATDGQATNRINDVILGSDWRVNALF IGLLAPVCEEWIFRKEIISRLRRYGEKTAIMFSALAFALFHMNVFQFFYAFGLGLMFGYVYTRTSRLRYSVAMHMLINLN GSVLAPLVIQQIDPRILDGTISEAEIMRMAETGNMGGMGIMMLYGTVMLGLCIAGIVLLITKRKIWEFYLAPEELPAGLK IRTAYANPGVISYLLLTVILTGWMLFA
Sequences:
>Translated_347_residues MSKPMPPAQQPQVPERPQQPQQTPRDWWFTAHRRFSTIGSALAIMMVFWIGLNILATEALRTLLGADVPAWAVLLASSGP LYVVAMPLSMLAFTRVPVIRTRQYPMKAGEFIQIFVMCIPVMLLGNMIGNILSAGATDGQATNRINDVILGSDWRVNALF IGLLAPVCEEWIFRKEIISRLRRYGEKTAIMFSALAFALFHMNVFQFFYAFGLGLMFGYVYTRTSRLRYSVAMHMLINLN GSVLAPLVIQQIDPRILDGTISEAEIMRMAETGNMGGMGIMMLYGTVMLGLCIAGIVLLITKRKIWEFYLAPEELPAGLK IRTAYANPGVISYLLLTVILTGWMLFA >Mature_346_residues SKPMPPAQQPQVPERPQQPQQTPRDWWFTAHRRFSTIGSALAIMMVFWIGLNILATEALRTLLGADVPAWAVLLASSGPL YVVAMPLSMLAFTRVPVIRTRQYPMKAGEFIQIFVMCIPVMLLGNMIGNILSAGATDGQATNRINDVILGSDWRVNALFI GLLAPVCEEWIFRKEIISRLRRYGEKTAIMFSALAFALFHMNVFQFFYAFGLGLMFGYVYTRTSRLRYSVAMHMLINLNG SVLAPLVIQQIDPRILDGTISEAEIMRMAETGNMGGMGIMMLYGTVMLGLCIAGIVLLITKRKIWEFYLAPEELPAGLKI RTAYANPGVISYLLLTVILTGWMLFA
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38770; Mature: 38639
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPMPPAQQPQVPERPQQPQQTPRDWWFTAHRRFSTIGSALAIMMVFWIGLNILATEAL CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTLLGADVPAWAVLLASSGPLYVVAMPLSMLAFTRVPVIRTRQYPMKAGEFIQIFVMCIP HHHHCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHH VMLLGNMIGNILSAGATDGQATNRINDVILGSDWRVNALFIGLLAPVCEEWIFRKEIISR HHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LRRYGEKTAIMFSALAFALFHMNVFQFFYAFGLGLMFGYVYTRTSRLRYSVAMHMLINLN HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSVLAPLVIQQIDPRILDGTISEAEIMRMAETGNMGGMGIMMLYGTVMLGLCIAGIVLLI CCHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TKRKIWEFYLAPEELPAGLKIRTAYANPGVISYLLLTVILTGWMLFA HHHHHHHHEECHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKPMPPAQQPQVPERPQQPQQTPRDWWFTAHRRFSTIGSALAIMMVFWIGLNILATEAL CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTLLGADVPAWAVLLASSGPLYVVAMPLSMLAFTRVPVIRTRQYPMKAGEFIQIFVMCIP HHHHCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHH VMLLGNMIGNILSAGATDGQATNRINDVILGSDWRVNALFIGLLAPVCEEWIFRKEIISR HHHHHHHHHHHHHCCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LRRYGEKTAIMFSALAFALFHMNVFQFFYAFGLGLMFGYVYTRTSRLRYSVAMHMLINLN HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GSVLAPLVIQQIDPRILDGTISEAEIMRMAETGNMGGMGIMMLYGTVMLGLCIAGIVLLI CCHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH TKRKIWEFYLAPEELPAGLKIRTAYANPGVISYLLLTVILTGWMLFA HHHHHHHHEECHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA