| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691240
Identifier: 213691240
GI number: 213691240
Start: 374587
End: 375408
Strand: Direct
Name: 213691240
Synonym: Blon_0323
Alternate gene names: NA
Gene position: 374587-375408 (Clockwise)
Preceding gene: 213691239
Following gene: 213691241
Centisome position: 13.22
GC content: 61.68
Gene sequence:
>822_bases TTGCGCGCCGCCCGCGCGCGCAAACAGAGCATCATCAAATTCGTGATCCTGTTCGTCACCCTGGCGTTCCTGTTCGTGCC GCTGCTGGCCATGCTCATCTTCACGCTGCGGCACCCGTTGTCCGGTCGCTGGTCGGCCGCGCCGTGGACGGCGATTTTCA CCGGCAACGGCGAATCGTTGGGCGCCGACCTGAGCGTGCTATGGCAGGGCGTCGGCATCTCGCTGTCGTTGAGCGCCGTC ACCGTCGCGATCATGCTCATCCTGCTGGTGCCCACCATGGTCATCGTGCATATTCGGTCCAAAGCCTTGGAGCGTGCGAT CGAATGGGTGGCTACATTGCCGCTGACCATTCCGGCCATCGTGCTGGTGGTGGGTCTTGGGCCGATCTACCGCTGGCTGT CCGCCGACGTGCTGAGCACCAACCCAATCTGGCTGTGCTTCGCCTACGTGATTCTCGTGATGCCGTTCGCCTTCCGCGCG ATCGCCGTGGGCCTCAACTCCATCGACGTCAAGACGTTGGTCGAAGCCTCCCGATCGCTCGGCGCCTCCTGGCCCAAAGT GTTCTTCAAGGTGATCATCCCGAACCTATGGCAGTCGATTCTCTCGGCATCCTTTATCTCCATCGCCGTGGTGCTGGGCG AATACACCGTCGCCTCGCTGCTCGGCCGTATGAACCTGCAGGTCGCGCTCTACCAGCTCGGCCAGTCCAATTCTCAAATC TCCACTGCCATGTCGCTGCTGGCTCTGCTCTTCGGCGTGGTGCTCCTCGTTGCGCTCGACCTGATCTCCGACGCAATGCG TAAGTCAAGGGAAGGTAAGTGA
Upstream 100 bases:
>100_bases AATGACTTCCCGAACCATACGCACCGTCGAAACCGTCGGCACCGAGACCGGCACCGTCGGCACCGTCGAAACCGTCGGCA CCGGCGTCAAGCCGCCGCAA
Downstream 100 bases:
>100_bases CCCGATGAACAACGATTCAACTCCCACCCGTCAGGAAACCGGTACCGCAGTGGACGCTGCCCCGGTGTCCCCGGCCATCC CGGCAGCCGTGTCCTCCACC
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: Permease Of ABC Transporter; ABC Transporter Permease Protein; Transmembrane Component Of ABC Transporter; Polyamine ABC Transporter Permease Protein; ABC Transporter; ABC Transport System Permease Protein; ABC-Type Transport System Permease Protein; Molybdate ABC Transporter Inner Membrane Subunit; ABC Transporter Integral Membrane Subunit; ABC Transporter Inner Membrane Protein; ABC Transporter Inner Membrane Subunit; ABC Transporter Membrane Protein; ABC Transporter Membrane Spanning Protein; ABC Transporter Permease Component; ABC-Type Transporter Permease Component
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MRAARARKQSIIKFVILFVTLAFLFVPLLAMLIFTLRHPLSGRWSAAPWTAIFTGNGESLGADLSVLWQGVGISLSLSAV TVAIMLILLVPTMVIVHIRSKALERAIEWVATLPLTIPAIVLVVGLGPIYRWLSADVLSTNPIWLCFAYVILVMPFAFRA IAVGLNSIDVKTLVEASRSLGASWPKVFFKVIIPNLWQSILSASFISIAVVLGEYTVASLLGRMNLQVALYQLGQSNSQI STAMSLLALLFGVVLLVALDLISDAMRKSREGK
Sequences:
>Translated_273_residues MRAARARKQSIIKFVILFVTLAFLFVPLLAMLIFTLRHPLSGRWSAAPWTAIFTGNGESLGADLSVLWQGVGISLSLSAV TVAIMLILLVPTMVIVHIRSKALERAIEWVATLPLTIPAIVLVVGLGPIYRWLSADVLSTNPIWLCFAYVILVMPFAFRA IAVGLNSIDVKTLVEASRSLGASWPKVFFKVIIPNLWQSILSASFISIAVVLGEYTVASLLGRMNLQVALYQLGQSNSQI STAMSLLALLFGVVLLVALDLISDAMRKSREGK >Mature_273_residues MRAARARKQSIIKFVILFVTLAFLFVPLLAMLIFTLRHPLSGRWSAAPWTAIFTGNGESLGADLSVLWQGVGISLSLSAV TVAIMLILLVPTMVIVHIRSKALERAIEWVATLPLTIPAIVLVVGLGPIYRWLSADVLSTNPIWLCFAYVILVMPFAFRA IAVGLNSIDVKTLVEASRSLGASWPKVFFKVIIPNLWQSILSASFISIAVVLGEYTVASLLGRMNLQVALYQLGQSNSQI STAMSLLALLFGVVLLVALDLISDAMRKSREGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29705; Mature: 29705
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAARARKQSIIKFVILFVTLAFLFVPLLAMLIFTLRHPLSGRWSAAPWTAIFTGNGESL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC GADLSVLWQGVGISLSLSAVTVAIMLILLVPTMVIVHIRSKALERAIEWVATLPLTIPAI CCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVVGLGPIYRWLSADVLSTNPIWLCFAYVILVMPFAFRAIAVGLNSIDVKTLVEASRSL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GASWPKVFFKVIIPNLWQSILSASFISIAVVLGEYTVASLLGRMNLQVALYQLGQSNSQI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH STAMSLLALLFGVVLLVALDLISDAMRKSREGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRAARARKQSIIKFVILFVTLAFLFVPLLAMLIFTLRHPLSGRWSAAPWTAIFTGNGESL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCC GADLSVLWQGVGISLSLSAVTVAIMLILLVPTMVIVHIRSKALERAIEWVATLPLTIPAI CCCHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVVGLGPIYRWLSADVLSTNPIWLCFAYVILVMPFAFRAIAVGLNSIDVKTLVEASRSL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GASWPKVFFKVIIPNLWQSILSASFISIAVVLGEYTVASLLGRMNLQVALYQLGQSNSQI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH STAMSLLALLFGVVLLVALDLISDAMRKSREGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA