| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691215
Identifier: 213691215
GI number: 213691215
Start: 350771
End: 351838
Strand: Direct
Name: 213691215
Synonym: Blon_0298
Alternate gene names: NA
Gene position: 350771-351838 (Clockwise)
Preceding gene: 213691209
Following gene: 213691216
Centisome position: 12.38
GC content: 49.25
Gene sequence:
>1068_bases ATGAAAATTGACTGCGATAATCTGATTCGTGCCTTGAAAACGTTGGCTATGTCGGAGGGCTTGAGTCAGAAAGAGCTGGG TGCGAGTCTAGGTTTTAGCCTTAATCGAACGAAGAACCTTTTCTCCGGACGGTCAAAACTCAGCGGTGAGGAAGTGCTCC GGATTCTTACCAGTCGAGAGCATCCATTACCGAAATTGAAGCGTTACCTACCGCTCTGCCAACTGCAACAAGATCTATGG GCTATCGAGTCCGAAAACCGTGGCGCGTCTGAAGAGAGCGAACTGGCTGTTGCGGATGCACAAGCAATACAGGGTTCCCT CATGACGGTGAATGTCAATAAACCACTTTCGGAGATGGCTCGTGATGTCATGCATGACAAGAAATGGCGAGTGCTTCCGA CCGGTTGGATCTGTTCGGTGACAATCGTGGGTGACCAATGTACGTATGATCCGATTGCTCCGGACTTTGTTACGGCAGTA TCGGCGATGAAGAAGATGGGGTGGATTTGGAAGCGAGGAAGTGGCGTATTCGCAAATTGGAACAAGATAAACGGCGGCAT GTCGGGGGAAGAAGCAGCTGGATATTGTGAGAACGCCTTACGGTCGTTCATTCTTGATCCTGAAAATGATGTAAGTATGA GTGACTCGTTTCGCCGGGCCGTACAGAAATATTGGGTGGGGGCGTCCGATACCGAAGAAATCGACAGGCTTCGGAATGTT GTGGAAAATGTTCGGCGGATGGCTGAGCATTGGGTAGATTGGGAATTGTCTGACGAGCCCAATGAATATGGTGTGTCACC AAAACAGATTTATGCGAACAAGTTCGACTACTTCGAGCAAGAGGTTCTCGGAATGCGGCAGCTTCATTTTGATTTGCTCA ATGATGGAACTGAAATTCCGTCCGACTTAGAAACTAGATATCGTGAGACCTTCTCGGAAGACGGCAAGCCTTACAAATAT TCCTACCGTATTGACCCTATCCTCAAAGTCAACGATGGTCCGGGACCCCTTGTAGACGCCTCTCCAGAGGACTGGAAGCG GTACCATGCAATCCGTGATGGTTCGTGA
Upstream 100 bases:
>100_bases GAAAACTTGTTTTTATTGAGGTGTAAAATTTACACTAAACAGTATTGAAGAGGATTGTTTTTCGTTGGAATCCCGGCGTT TCTAAGGATCTGATAAAAAT
Downstream 100 bases:
>100_bases ATTTGTTGATTCATGTTGGTACTGCTTGGCGGATTTGTCCAGAATTTGTCCAGATTCACGGTGTGTAGACGGATGTTGGA ATACGAGAAAAGGCTAGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MKIDCDNLIRALKTLAMSEGLSQKELGASLGFSLNRTKNLFSGRSKLSGEEVLRILTSREHPLPKLKRYLPLCQLQQDLW AIESENRGASEESELAVADAQAIQGSLMTVNVNKPLSEMARDVMHDKKWRVLPTGWICSVTIVGDQCTYDPIAPDFVTAV SAMKKMGWIWKRGSGVFANWNKINGGMSGEEAAGYCENALRSFILDPENDVSMSDSFRRAVQKYWVGASDTEEIDRLRNV VENVRRMAEHWVDWELSDEPNEYGVSPKQIYANKFDYFEQEVLGMRQLHFDLLNDGTEIPSDLETRYRETFSEDGKPYKY SYRIDPILKVNDGPGPLVDASPEDWKRYHAIRDGS
Sequences:
>Translated_355_residues MKIDCDNLIRALKTLAMSEGLSQKELGASLGFSLNRTKNLFSGRSKLSGEEVLRILTSREHPLPKLKRYLPLCQLQQDLW AIESENRGASEESELAVADAQAIQGSLMTVNVNKPLSEMARDVMHDKKWRVLPTGWICSVTIVGDQCTYDPIAPDFVTAV SAMKKMGWIWKRGSGVFANWNKINGGMSGEEAAGYCENALRSFILDPENDVSMSDSFRRAVQKYWVGASDTEEIDRLRNV VENVRRMAEHWVDWELSDEPNEYGVSPKQIYANKFDYFEQEVLGMRQLHFDLLNDGTEIPSDLETRYRETFSEDGKPYKY SYRIDPILKVNDGPGPLVDASPEDWKRYHAIRDGS >Mature_355_residues MKIDCDNLIRALKTLAMSEGLSQKELGASLGFSLNRTKNLFSGRSKLSGEEVLRILTSREHPLPKLKRYLPLCQLQQDLW AIESENRGASEESELAVADAQAIQGSLMTVNVNKPLSEMARDVMHDKKWRVLPTGWICSVTIVGDQCTYDPIAPDFVTAV SAMKKMGWIWKRGSGVFANWNKINGGMSGEEAAGYCENALRSFILDPENDVSMSDSFRRAVQKYWVGASDTEEIDRLRNV VENVRRMAEHWVDWELSDEPNEYGVSPKQIYANKFDYFEQEVLGMRQLHFDLLNDGTEIPSDLETRYRETFSEDGKPYKY SYRIDPILKVNDGPGPLVDASPEDWKRYHAIRDGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40347; Mature: 40347
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDCDNLIRALKTLAMSEGLSQKELGASLGFSLNRTKNLFSGRSKLSGEEVLRILTSRE CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCHHCCCHHHHHHHHHCCC HPLPKLKRYLPLCQLQQDLWAIESENRGASEESELAVADAQAIQGSLMTVNVNKPLSEMA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHH RDVMHDKKWRVLPTGWICSVTIVGDQCTYDPIAPDFVTAVSAMKKMGWIWKRGSGVFANW HHHHCCCCCEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCEEEC NKINGGMSGEEAAGYCENALRSFILDPENDVSMSDSFRRAVQKYWVGASDTEEIDRLRNV HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH VENVRRMAEHWVDWELSDEPNEYGVSPKQIYANKFDYFEQEVLGMRQLHFDLLNDGTEIP HHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SDLETRYRETFSEDGKPYKYSYRIDPILKVNDGPGPLVDASPEDWKRYHAIRDGS HHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MKIDCDNLIRALKTLAMSEGLSQKELGASLGFSLNRTKNLFSGRSKLSGEEVLRILTSRE CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCHHCCCHHHHHHHHHCCC HPLPKLKRYLPLCQLQQDLWAIESENRGASEESELAVADAQAIQGSLMTVNVNKPLSEMA CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHH RDVMHDKKWRVLPTGWICSVTIVGDQCTYDPIAPDFVTAVSAMKKMGWIWKRGSGVFANW HHHHCCCCCEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCEEEC NKINGGMSGEEAAGYCENALRSFILDPENDVSMSDSFRRAVQKYWVGASDTEEIDRLRNV HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH VENVRRMAEHWVDWELSDEPNEYGVSPKQIYANKFDYFEQEVLGMRQLHFDLLNDGTEIP HHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SDLETRYRETFSEDGKPYKYSYRIDPILKVNDGPGPLVDASPEDWKRYHAIRDGS HHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA