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The map label for this gene is int [H]

Identifier: 213691206

GI number: 213691206

Start: 343475

End: 344698

Strand: Direct

Name: int [H]

Synonym: Blon_0288

Alternate gene names: 213691206

Gene position: 343475-344698 (Clockwise)

Preceding gene: 213691205

Following gene: 213691207

Centisome position: 12.13

GC content: 53.19

Gene sequence:

>1224_bases
ATGACGAAGCGGGAAACGTCCGGACAGATCACCGAACTGGAGCGAGGACGGAAGTATTCGATTCGCGTCCGTCTCGCTCC
AGACAATGAACATAAGTCTTGGCATTGGTCAAAGTCGCGTAAGGTCTACGGGAACAAAGCCGAGGCCACGGCAGCGATGG
TTGCCTACAAACAAGAACTCGAGGATGAGCGTTCCGGCAAGAACGTGACGGTGGCGGAATACGCTGACATGTTCCAATCC
AACCGCAAGGCTCTCGGCACGGTTTCCGTGCTCACCATTGAGCGGGACCAACATGAGATTGACCACATCAAGAAATATCT
TGGAGAGACAAGAGTAATCGACCTTACCTCGCAGCAGATCGAGAACGCCTATTTACGCATGTCGGAACAGGATGGAGCTT
CGCCAGATGCCATTCACAAGGTCCATATGAAATTATCCCAGATCATGCGCAAGGCTTTCTTGGATGAGCTGATTAACCGC
AACCCATGTGATGCGGTGGAAGGCGTCAGGCGCCCAAAGGTGAGCCAACAGAAGCGCAGGGAAACACGAATCACAAAGGA
ACAGGCACTCGCATTCGTTCACAAGATACGGCAGGAACCTCAAGACGGGCGAATTGTAGCGGTCTGGTTGGGCGTGGCCA
CGGGTCTTCGCCGTGGCGAAGCACTGGCGCTGGTGTGGGAAGACGTGGACCTAGACAACGCGCGATTGCGCATTCGTAAG
CAGCTCGGCAAGGAGAAGATTCTGAAGGATCCCAAGACCGCCAAGTCTCGACGCACCATTTCCATCGACAGGCAGACAGT
TGAATTTCTGAAGCAGTGGAAAACTCGCCAACATAATCTATTCCGCGCCGCAGGTGTTGAACAGCAAGATGATTCACCAG
TATGCAGCAACGAATTATGCGGATTCTTGGACCCCGACAACTTCAGCCGTTGGCGTCGAAAGTTTTACGTCAAAGAAGGT
CTGGCGCACTATACCAATGAGACTCGGTACGTTGATAAGCGCGGAGTCGAAAGGGTGAAACAGACTGGCTACGTCGGTCC
TAATTTCCATGCGCTTCGTCGTGCTCAGGCCACACTACTCGTTGCTGGAGGCGTGGATCCTAAAACGGTTCAGGCTCGTC
TTGGACACGAGAGCCTGAACACGACGTTGAATATCTATGCTGAGGAGGTAGGAGAAAACGACCGCAAGGCAGCTGACTTT
ATGGGAGAGCTGCTTCGCAGCTAA

Upstream 100 bases:

>100_bases
GTTGTGATTGGCGAGTTTGTCCAACTTTTGTCCAGATTATTTGTGTCCAGATTTGTCCAAATCTGGTAGCATATAACCAA
CTGTTGAAGGAGTAGCTGAT

Downstream 100 bases:

>100_bases
TGTTAGTGGCCTATTCTCCGTATGGTCCCATGAAACGGGATCCGTTGAAGTGCATCATATGATCTGGTGTGTCGGCGCAC
CATGCTTCGGTTTCCCATGC

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MTKRETSGQITELERGRKYSIRVRLAPDNEHKSWHWSKSRKVYGNKAEATAAMVAYKQELEDERSGKNVTVAEYADMFQS
NRKALGTVSVLTIERDQHEIDHIKKYLGETRVIDLTSQQIENAYLRMSEQDGASPDAIHKVHMKLSQIMRKAFLDELINR
NPCDAVEGVRRPKVSQQKRRETRITKEQALAFVHKIRQEPQDGRIVAVWLGVATGLRRGEALALVWEDVDLDNARLRIRK
QLGKEKILKDPKTAKSRRTISIDRQTVEFLKQWKTRQHNLFRAAGVEQQDDSPVCSNELCGFLDPDNFSRWRRKFYVKEG
LAHYTNETRYVDKRGVERVKQTGYVGPNFHALRRAQATLLVAGGVDPKTVQARLGHESLNTTLNIYAEEVGENDRKAADF
MGELLRS

Sequences:

>Translated_407_residues
MTKRETSGQITELERGRKYSIRVRLAPDNEHKSWHWSKSRKVYGNKAEATAAMVAYKQELEDERSGKNVTVAEYADMFQS
NRKALGTVSVLTIERDQHEIDHIKKYLGETRVIDLTSQQIENAYLRMSEQDGASPDAIHKVHMKLSQIMRKAFLDELINR
NPCDAVEGVRRPKVSQQKRRETRITKEQALAFVHKIRQEPQDGRIVAVWLGVATGLRRGEALALVWEDVDLDNARLRIRK
QLGKEKILKDPKTAKSRRTISIDRQTVEFLKQWKTRQHNLFRAAGVEQQDDSPVCSNELCGFLDPDNFSRWRRKFYVKEG
LAHYTNETRYVDKRGVERVKQTGYVGPNFHALRRAQATLLVAGGVDPKTVQARLGHESLNTTLNIYAEEVGENDRKAADF
MGELLRS
>Mature_406_residues
TKRETSGQITELERGRKYSIRVRLAPDNEHKSWHWSKSRKVYGNKAEATAAMVAYKQELEDERSGKNVTVAEYADMFQSN
RKALGTVSVLTIERDQHEIDHIKKYLGETRVIDLTSQQIENAYLRMSEQDGASPDAIHKVHMKLSQIMRKAFLDELINRN
PCDAVEGVRRPKVSQQKRRETRITKEQALAFVHKIRQEPQDGRIVAVWLGVATGLRRGEALALVWEDVDLDNARLRIRKQ
LGKEKILKDPKTAKSRRTISIDRQTVEFLKQWKTRQHNLFRAAGVEQQDDSPVCSNELCGFLDPDNFSRWRRKFYVKEGL
AHYTNETRYVDKRGVERVKQTGYVGPNFHALRRAQATLLVAGGVDPKTVQARLGHESLNTTLNIYAEEVGENDRKAADFM
GELLRS

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1787607, Length=257, Percent_Identity=24.124513618677, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 46810; Mature: 46679

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRETSGQITELERGRKYSIRVRLAPDNEHKSWHWSKSRKVYGNKAEATAAMVAYKQEL
CCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
EDERSGKNVTVAEYADMFQSNRKALGTVSVLTIERDQHEIDHIKKYLGETRVIDLTSQQI
HHHHCCCCEEHHHHHHHHHCCCHHHCEEEEEEEECCHHHHHHHHHHHCCCEEEECHHHHH
ENAYLRMSEQDGASPDAIHKVHMKLSQIMRKAFLDELINRNPCDAVEGVRRPKVSQQKRR
HHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHH
ETRITKEQALAFVHKIRQEPQDGRIVAVWLGVATGLRRGEALALVWEDVDLDNARLRIRK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHH
QLGKEKILKDPKTAKSRRTISIDRQTVEFLKQWKTRQHNLFRAAGVEQQDDSPVCSNELC
HHCHHHHHCCCCCHHCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC
GFLDPDNFSRWRRKFYVKEGLAHYTNETRYVDKRGVERVKQTGYVGPNFHALRRAQATLL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEE
VAGGVDPKTVQARLGHESLNTTLNIYAEEVGENDRKAADFMGELLRS
EECCCCHHHHHHHHCHHHHCHHHEEEHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TKRETSGQITELERGRKYSIRVRLAPDNEHKSWHWSKSRKVYGNKAEATAAMVAYKQEL
CCCCCCCCHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
EDERSGKNVTVAEYADMFQSNRKALGTVSVLTIERDQHEIDHIKKYLGETRVIDLTSQQI
HHHHCCCCEEHHHHHHHHHCCCHHHCEEEEEEEECCHHHHHHHHHHHCCCEEEECHHHHH
ENAYLRMSEQDGASPDAIHKVHMKLSQIMRKAFLDELINRNPCDAVEGVRRPKVSQQKRR
HHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHH
ETRITKEQALAFVHKIRQEPQDGRIVAVWLGVATGLRRGEALALVWEDVDLDNARLRIRK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHH
QLGKEKILKDPKTAKSRRTISIDRQTVEFLKQWKTRQHNLFRAAGVEQQDDSPVCSNELC
HHCHHHHHCCCCCHHCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC
GFLDPDNFSRWRRKFYVKEGLAHYTNETRYVDKRGVERVKQTGYVGPNFHALRRAQATLL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEE
VAGGVDPKTVQARLGHESLNTTLNIYAEEVGENDRKAADFMGELLRS
EECCCCHHHHHHHHCHHHHCHHHEEEHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]