Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691189

Identifier: 213691189

GI number: 213691189

Start: 320267

End: 321625

Strand: Reverse

Name: 213691189

Synonym: Blon_0270

Alternate gene names: NA

Gene position: 321625-320267 (Counterclockwise)

Preceding gene: 213691193

Following gene: 213691188

Centisome position: 11.35

GC content: 67.48

Gene sequence:

>1359_bases
ATGGCCGGCGATGTGGCCGGGAACGACAATGGTGCCGTGACGGATTCGCGGTCCCTGGTGGACTCGCTGGTCGCGTCGGG
AGCGCTGGACCCCCTGTTCGAACGGATAGACGGCGGGCAGATCGAGCTCACCGGCGACGGCGGACTACCGGGCGAGCTCA
CGAGGGCCGCCCTGGAACGCGGCCTGCAGACGGAGATGACGTCGCACCTGGGCTACGCGCCCGGCGACAGGGAGTCGAAG
GCGGGCGGCGGGCATGCGAACTCGCGCAACGGCTCGTATCCCAAGACGCCGTCCACGCCGGTGGGAGAGGCGGCCGTGCA
GGTTCCCCGCGACAGGGACGGCTCGTTCACCCCGAGGTTGGCGCCCAAGCATTCCAGGAGGCTGGGCGGACTGGACGAGA
TGATCATATCCCTGTACGCGGGCGGCATGACGGTGCGCGACATCCAGCACCACCTCGCCAAGACGATCGGCACGGACCTG
AGCCCCGAGACGATATCCAACATCACCGACGCGGTGAGCGACGCCGTGCTCGAATGGCAGGAGCGGCCGCTGGACGAGTC
CTATCCGGTCGTGTACCTGGACGCCGTCAGGGTCAAGGTGCGCGACAACGGCAGAGTGCTGCCCAAGGCGGCGCACATCG
CCATCGGCGTCGACATGGACGGGTTCAAGCATGTGCCTGGCATGTGGGTCCAGGACAACGAGGGCGCCTCCTTCCGGGCG
CACGTGTGCGCCGAGATGGCCAACCGGGGCATGGCCGACGCGCTGATCGTGTGCTGCGACGGGCTCAAGGGCCTGCCCGA
GGCCGTGGAGGCCACGTGGCCCAAGGCGATCGCGCGGACCTGCGTGGCGCACCCGATACGCGCGGCCAACAGGTTCGTCG
CCGACCACGACAGGAAGAGGGTGTGCGCGGCGCTCAGGAGCGTGTACCGCGCGCCCAACGGGCAGGCCGCGGAAAAGGCG
CTCGGCGAGTTCGCGGAAAGCGAGCTCGGCCGGAGATACCCGTCGGTGGCCGCCACGTGGAAACGCTCGTGGGACCGGTT
CGTCCCGTTCCCGCGGTTCCCGCCCATGCTCCGCCGGGTGGCGTACACCACCAACAGCATCGAATCGCCCGACTACCAGT
CGCGCAAGGTCAGCCGCAACCGCAGCCAGTTCCCCAACGACCAGGCCGTGGTCAAGCTGTTCTGGCTGGCAATCTGCGAC
ATCGAGGACAAACGCAGCCTCAAACGCGCCAAAGACGGCAACAAAACCAGGCGCAAAAGCGAGGGAAGGCTCATCGAGGG
GCGCATGACGACCAACTGGAAACAGGCCCTCGCCCAACTCGCGGCCGCATACCCCGAACGAATGGAACCTTATTTATAA

Upstream 100 bases:

>100_bases
AAAAACGCCGGCCGGTCATTCTGAGAGGGTGTCTAATTGTTTGTGTATGGGATCATCTGATGGAAAGGAAACGATCATGG
TGACCGAGGCAGTGAAGCCT

Downstream 100 bases:

>100_bases
AACACACCCCAAACACAAATAACTTGACAAGCTCCGTCGACAGGGTCAGAAAGGCCGAGGGCGGGCACAACGCGCTGCTC
AAACGCACGAAATACCTGTG

Product: transposase, mutator type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MAGDVAGNDNGAVTDSRSLVDSLVASGALDPLFERIDGGQIELTGDGGLPGELTRAALERGLQTEMTSHLGYAPGDRESK
AGGGHANSRNGSYPKTPSTPVGEAAVQVPRDRDGSFTPRLAPKHSRRLGGLDEMIISLYAGGMTVRDIQHHLAKTIGTDL
SPETISNITDAVSDAVLEWQERPLDESYPVVYLDAVRVKVRDNGRVLPKAAHIAIGVDMDGFKHVPGMWVQDNEGASFRA
HVCAEMANRGMADALIVCCDGLKGLPEAVEATWPKAIARTCVAHPIRAANRFVADHDRKRVCAALRSVYRAPNGQAAEKA
LGEFAESELGRRYPSVAATWKRSWDRFVPFPRFPPMLRRVAYTTNSIESPDYQSRKVSRNRSQFPNDQAVVKLFWLAICD
IEDKRSLKRAKDGNKTRRKSEGRLIEGRMTTNWKQALAQLAAAYPERMEPYL

Sequences:

>Translated_452_residues
MAGDVAGNDNGAVTDSRSLVDSLVASGALDPLFERIDGGQIELTGDGGLPGELTRAALERGLQTEMTSHLGYAPGDRESK
AGGGHANSRNGSYPKTPSTPVGEAAVQVPRDRDGSFTPRLAPKHSRRLGGLDEMIISLYAGGMTVRDIQHHLAKTIGTDL
SPETISNITDAVSDAVLEWQERPLDESYPVVYLDAVRVKVRDNGRVLPKAAHIAIGVDMDGFKHVPGMWVQDNEGASFRA
HVCAEMANRGMADALIVCCDGLKGLPEAVEATWPKAIARTCVAHPIRAANRFVADHDRKRVCAALRSVYRAPNGQAAEKA
LGEFAESELGRRYPSVAATWKRSWDRFVPFPRFPPMLRRVAYTTNSIESPDYQSRKVSRNRSQFPNDQAVVKLFWLAICD
IEDKRSLKRAKDGNKTRRKSEGRLIEGRMTTNWKQALAQLAAAYPERMEPYL
>Mature_451_residues
AGDVAGNDNGAVTDSRSLVDSLVASGALDPLFERIDGGQIELTGDGGLPGELTRAALERGLQTEMTSHLGYAPGDRESKA
GGGHANSRNGSYPKTPSTPVGEAAVQVPRDRDGSFTPRLAPKHSRRLGGLDEMIISLYAGGMTVRDIQHHLAKTIGTDLS
PETISNITDAVSDAVLEWQERPLDESYPVVYLDAVRVKVRDNGRVLPKAAHIAIGVDMDGFKHVPGMWVQDNEGASFRAH
VCAEMANRGMADALIVCCDGLKGLPEAVEATWPKAIARTCVAHPIRAANRFVADHDRKRVCAALRSVYRAPNGQAAEKAL
GEFAESELGRRYPSVAATWKRSWDRFVPFPRFPPMLRRVAYTTNSIESPDYQSRKVSRNRSQFPNDQAVVKLFWLAICDI
EDKRSLKRAKDGNKTRRKSEGRLIEGRMTTNWKQALAQLAAAYPERMEPYL

Specific function: Required for the transposition of the insertion element [H]

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 49529; Mature: 49397

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGDVAGNDNGAVTDSRSLVDSLVASGALDPLFERIDGGQIELTGDGGLPGELTRAALER
CCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
GLQTEMTSHLGYAPGDRESKAGGGHANSRNGSYPKTPSTPVGEAAVQVPRDRDGSFTPRL
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
APKHSRRLGGLDEMIISLYAGGMTVRDIQHHLAKTIGTDLSPETISNITDAVSDAVLEWQ
CCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ERPLDESYPVVYLDAVRVKVRDNGRVLPKAAHIAIGVDMDGFKHVPGMWVQDNEGASFRA
HCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCHHH
HVCAEMANRGMADALIVCCDGLKGLPEAVEATWPKAIARTCVAHPIRAANRFVADHDRKR
HHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VCAALRSVYRAPNGQAAEKALGEFAESELGRRYPSVAATWKRSWDRFVPFPRFPPMLRRV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHH
AYTTNSIESPDYQSRKVSRNRSQFPNDQAVVKLFWLAICDIEDKRSLKRAKDGNKTRRKS
HHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHC
EGRLIEGRMTTNWKQALAQLAAAYPERMEPYL
CCCEEECCCCCCHHHHHHHHHHHCHHHCCCCC
>Mature Secondary Structure 
AGDVAGNDNGAVTDSRSLVDSLVASGALDPLFERIDGGQIELTGDGGLPGELTRAALER
CCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
GLQTEMTSHLGYAPGDRESKAGGGHANSRNGSYPKTPSTPVGEAAVQVPRDRDGSFTPRL
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
APKHSRRLGGLDEMIISLYAGGMTVRDIQHHLAKTIGTDLSPETISNITDAVSDAVLEWQ
CCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
ERPLDESYPVVYLDAVRVKVRDNGRVLPKAAHIAIGVDMDGFKHVPGMWVQDNEGASFRA
HCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCHHH
HVCAEMANRGMADALIVCCDGLKGLPEAVEATWPKAIARTCVAHPIRAANRFVADHDRKR
HHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VCAALRSVYRAPNGQAAEKALGEFAESELGRRYPSVAATWKRSWDRFVPFPRFPPMLRRV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHH
AYTTNSIESPDYQSRKVSRNRSQFPNDQAVVKLFWLAICDIEDKRSLKRAKDGNKTRRKS
HHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHC
EGRLIEGRMTTNWKQALAQLAAAYPERMEPYL
CCCEEECCCCCCHHHHHHHHHHHCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA