Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213691182

Identifier: 213691182

GI number: 213691182

Start: 308088

End: 308402

Strand: Direct

Name: 213691182

Synonym: Blon_0262

Alternate gene names: NA

Gene position: 308088-308402 (Clockwise)

Preceding gene: 213691181

Following gene: 213691183

Centisome position: 10.88

GC content: 53.02

Gene sequence:

>315_bases
ATGAGTGCCGAGGATCTCGACAATTACGAAACCGACGCCGAACTCGCGCTGTATAGGGAATACCGTGACGTCATCAAGCT
GTTCACCTATGTGGTGGAGACTGAGCGTCGCTTCTACTTGGCGAATAAGGTCGATTTCAACGTGCGTTCCGCTGGCCAGG
ACGTGTATTTCGATGTGCAGCTGACTGACGCATGGGTATGGGATGTCTACCGTTCCAGCCGTTTCGTCAAGTCCGTGCGC
ATCGTGACGTTCAAGGACGTGAACGTCGAAGAAGTCCAGAAAACCGATATCGACATTCCCGACGACATCCACTGA

Upstream 100 bases:

>100_bases
CCGTACGATCAGGCAGAACGCAAGCCCTCAAAGGAAGCATGGTGGCGTACGCTGGGCCGCGGCCGCAAACGCGATACGGA
AAGTGAGTGAGTAAACAAGC

Downstream 100 bases:

>100_bases
TCCGGTGTCGCGCCACGACAGTCGCCTATTCACCGATTATGCGACCACGGTTTGCCGGGACGTCACTTGATACGTGTGTC
GTGTTCGATTCATGCTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSAEDLDNYETDAELALYREYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVQLTDAWVWDVYRSSRFVKSVR
IVTFKDVNVEEVQKTDIDIPDDIH

Sequences:

>Translated_104_residues
MSAEDLDNYETDAELALYREYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVQLTDAWVWDVYRSSRFVKSVR
IVTFKDVNVEEVQKTDIDIPDDIH
>Mature_103_residues
SAEDLDNYETDAELALYREYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVQLTDAWVWDVYRSSRFVKSVRI
VTFKDVNVEEVQKTDIDIPDDIH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019592 [H]

Pfam domain/function: PF10611 DUF2469 [H]

EC number: NA

Molecular weight: Translated: 12414; Mature: 12283

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAEDLDNYETDAELALYREYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECCCCCEEEEEEE
LTDAWVWDVYRSSRFVKSVRIVTFKDVNVEEVQKTDIDIPDDIH
ECCHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SAEDLDNYETDAELALYREYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECCCCCEEEEEEE
LTDAWVWDVYRSSRFVKSVRIVTFKDVNVEEVQKTDIDIPDDIH
ECCHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]