| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691182
Identifier: 213691182
GI number: 213691182
Start: 308088
End: 308402
Strand: Direct
Name: 213691182
Synonym: Blon_0262
Alternate gene names: NA
Gene position: 308088-308402 (Clockwise)
Preceding gene: 213691181
Following gene: 213691183
Centisome position: 10.88
GC content: 53.02
Gene sequence:
>315_bases ATGAGTGCCGAGGATCTCGACAATTACGAAACCGACGCCGAACTCGCGCTGTATAGGGAATACCGTGACGTCATCAAGCT GTTCACCTATGTGGTGGAGACTGAGCGTCGCTTCTACTTGGCGAATAAGGTCGATTTCAACGTGCGTTCCGCTGGCCAGG ACGTGTATTTCGATGTGCAGCTGACTGACGCATGGGTATGGGATGTCTACCGTTCCAGCCGTTTCGTCAAGTCCGTGCGC ATCGTGACGTTCAAGGACGTGAACGTCGAAGAAGTCCAGAAAACCGATATCGACATTCCCGACGACATCCACTGA
Upstream 100 bases:
>100_bases CCGTACGATCAGGCAGAACGCAAGCCCTCAAAGGAAGCATGGTGGCGTACGCTGGGCCGCGGCCGCAAACGCGATACGGA AAGTGAGTGAGTAAACAAGC
Downstream 100 bases:
>100_bases TCCGGTGTCGCGCCACGACAGTCGCCTATTCACCGATTATGCGACCACGGTTTGCCGGGACGTCACTTGATACGTGTGTC GTGTTCGATTCATGCTCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSAEDLDNYETDAELALYREYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVQLTDAWVWDVYRSSRFVKSVR IVTFKDVNVEEVQKTDIDIPDDIH
Sequences:
>Translated_104_residues MSAEDLDNYETDAELALYREYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVQLTDAWVWDVYRSSRFVKSVR IVTFKDVNVEEVQKTDIDIPDDIH >Mature_103_residues SAEDLDNYETDAELALYREYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVQLTDAWVWDVYRSSRFVKSVRI VTFKDVNVEEVQKTDIDIPDDIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019592 [H]
Pfam domain/function: PF10611 DUF2469 [H]
EC number: NA
Molecular weight: Translated: 12414; Mature: 12283
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEDLDNYETDAELALYREYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECCCCCEEEEEEE LTDAWVWDVYRSSRFVKSVRIVTFKDVNVEEVQKTDIDIPDDIH ECCHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHCCCCCCCCCC >Mature Secondary Structure SAEDLDNYETDAELALYREYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECCCCCEEEEEEE LTDAWVWDVYRSSRFVKSVRIVTFKDVNVEEVQKTDIDIPDDIH ECCHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]