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The map label for this gene is ssb [H]

Identifier: 213691156

GI number: 213691156

Start: 281286

End: 281945

Strand: Direct

Name: ssb [H]

Synonym: Blon_0235

Alternate gene names: 213691156

Gene position: 281286-281945 (Clockwise)

Preceding gene: 213691155

Following gene: 213691157

Centisome position: 9.93

GC content: 64.7

Gene sequence:

>660_bases
ATGGCAGGCGAAACCGTCATCACCATCGTGGGCAACCTCACTGCGGACCCCGAGCTGCGCACTATCGGCAGCGGCGCGAC
CGTGGCGAGCTTCACGATTGCTTCTACCCCGCGAACCTGGAATCGTCAGACCAACCAGTTCGAGGATGGTCAGGCGCTGT
TCATGAGGTGCGCCGCTTGGCGTGATCTGGCCGACCACTGCGTCCAGTCCCTGAAGAAGGGCATGCGCGTGATTGCCACC
GGTCGCCTCCAGCAGCGTTCCTATCAGGCACAGGATGGTTCCCAGCGAACCGTCGTGGAGATGCAGCTCGATGAAATCGG
GCCCTCCCTGCGTTACGCCACCGCACAGGTGACCCGCCAGTCGTCCGGTCAGGGCGGCTTCCAGGGTCGTTCCGGTGGTC
TCCAGGGTGGTCAGCAGCCCAATCAGGGCTATGGCAACCAGGGTGGCCAAGGTGGTTATGCCGGTGGCCAGGGCGGTTAC
AACGGTGGCTATCAGGGTGGTGGCGCTGGATACTCCCAGCAGCCTGCCGCTCCCGCCAACCCGTCCGCTCCTGCGGCCGA
CCCGTGGAGCAATGCCGGTGCATCTGATGCCGGTAGCTTCTCCACGTTCGGCGCTTCCTCCGATTTCGGCGGCGGCGACG
ATTCCGACCCGGAGTTCTGA

Upstream 100 bases:

>100_bases
TCAACGAATCCGTGATCCGTACGAAGATCCTTCGTAAGGGCTGAATCAAGCGTTTAGTCAGCTGAACAGCTGGTATTCAA
GGTAAGTAAGAAGGACCGTT

Downstream 100 bases:

>100_bases
TCAGTACTTACCTCCCCGCTGCCAGCAGCAATCAATATCAAGATTTATAAGGAGAACATCATGTCACGTAAGAGGCCGCA
ACCGCCGGTCAAGCCGTTCA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MAGETVITIVGNLTADPELRTIGSGATVASFTIASTPRTWNRQTNQFEDGQALFMRCAAWRDLADHCVQSLKKGMRVIAT
GRLQQRSYQAQDGSQRTVVEMQLDEIGPSLRYATAQVTRQSSGQGGFQGRSGGLQGGQQPNQGYGNQGGQGGYAGGQGGY
NGGYQGGGAGYSQQPAAPANPSAPAADPWSNAGASDAGSFSTFGASSDFGGGDDSDPEF

Sequences:

>Translated_219_residues
MAGETVITIVGNLTADPELRTIGSGATVASFTIASTPRTWNRQTNQFEDGQALFMRCAAWRDLADHCVQSLKKGMRVIAT
GRLQQRSYQAQDGSQRTVVEMQLDEIGPSLRYATAQVTRQSSGQGGFQGRSGGLQGGQQPNQGYGNQGGQGGYAGGQGGY
NGGYQGGGAGYSQQPAAPANPSAPAADPWSNAGASDAGSFSTFGASSDFGGGDDSDPEF
>Mature_218_residues
AGETVITIVGNLTADPELRTIGSGATVASFTIASTPRTWNRQTNQFEDGQALFMRCAAWRDLADHCVQSLKKGMRVIATG
RLQQRSYQAQDGSQRTVVEMQLDEIGPSLRYATAQVTRQSSGQGGFQGRSGGLQGGQQPNQGYGNQGGQGGYAGGQGGYN
GGYQGGGAGYSQQPAAPANPSAPAADPWSNAGASDAGSFSTFGASSDFGGGDDSDPEF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 22573; Mature: 22441

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGETVITIVGNLTADPELRTIGSGATVASFTIASTPRTWNRQTNQFEDGQALFMRCAAW
CCCCEEEEEEECCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
RDLADHCVQSLKKGMRVIATGRLQQRSYQAQDGSQRTVVEMQLDEIGPSLRYATAQVTRQ
HHHHHHHHHHHHHHHEEEHHCHHHHHHHCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHC
SSGQGGFQGRSGGLQGGQQPNQGYGNQGGQGGYAGGQGGYNGGYQGGGAGYSQQPAAPAN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSAPAADPWSNAGASDAGSFSTFGASSDFGGGDDSDPEF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGETVITIVGNLTADPELRTIGSGATVASFTIASTPRTWNRQTNQFEDGQALFMRCAAW
CCCEEEEEEECCCCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
RDLADHCVQSLKKGMRVIATGRLQQRSYQAQDGSQRTVVEMQLDEIGPSLRYATAQVTRQ
HHHHHHHHHHHHHHHEEEHHCHHHHHHHCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHC
SSGQGGFQGRSGGLQGGQQPNQGYGNQGGQGGYAGGQGGYNGGYQGGGAGYSQQPAAPAN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSAPAADPWSNAGASDAGSFSTFGASSDFGGGDDSDPEF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12381787 [H]