| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691075
Identifier: 213691075
GI number: 213691075
Start: 183363
End: 183965
Strand: Direct
Name: 213691075
Synonym: Blon_0154
Alternate gene names: NA
Gene position: 183363-183965 (Clockwise)
Preceding gene: 213691074
Following gene: 213691076
Centisome position: 6.47
GC content: 59.37
Gene sequence:
>603_bases ATGAGTACGGTGTGGGTACGCGCCGCGGCAGGCTGTGCGGCGATTGCTAGTTGGCTGTATAAGGTTCCGGTTCGTCATGA CAGCCGCTTGCCGTGTGAGGAGCCGGCTGCAGCGCATGATTGCGGGTCGTCATGGACCATACTCATATTGCGCATGTTGC AGGTGTCATTGCGGCAAGGCTCTTCGATTCCCCGGGCGCTTGACATGGTGGGCAAAGCCGTCGGCGACGACTGCGGTGCT CGCATGAGCGAGGTCGGGAGCTCCCTGACCAGAGGGGTTCCCTGGGCTGATGCGTGGCATGCCGCTATGGCTGTTCAGCA TGAGGGTGCGCCAGCTGATAGTCCATCCGGGGAAGATACGAATACCACGCAACGAGATCTTGGCCTGCTGCAATCGGCTT TGGAATCGTCATGGACGCATGGCGATATGCCTGGCGTGCGCCTCGAATCCGCCATTGAACAGCTGGACCGTGACGAGCGT GCTGCCATCGAACGGAATGCCGCGAAGCTGTCGGTAAAGCTACTGATGCCTACAGGGCTATGTTTTCTGCCGGCATTCGT GCTGGTAGGAGTCATTCCGGCGATTGCGTCCTTCATGATGTGA
Upstream 100 bases:
>100_bases TGATTGGATCGCCGCGCGGTGTGGTCTGCCTGACATTGGGAGGATGTTGTTATGCTGCCGGCTTGGCATGGATGCGGGCA TTGTTGAAAGGCAGCGGATT
Downstream 100 bases:
>100_bases ATGTAGGCGTGAACCGAGTGCGCTTGGGCTGAATTTTGTTGTATCGCTCGGTATTGCACTTGGCTGCGTTTGGTTATCCA CATTTGTGGTGGACGACACG
Product: hypothetical protein
Products: NA
Alternate protein names: Bacterial Type II Secretion System Protein F Domain Protein; Type II Secretion System Protein Pilus Assembly
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSTVWVRAAAGCAAIASWLYKVPVRHDSRLPCEEPAAAHDCGSSWTILILRMLQVSLRQGSSIPRALDMVGKAVGDDCGA RMSEVGSSLTRGVPWADAWHAAMAVQHEGAPADSPSGEDTNTTQRDLGLLQSALESSWTHGDMPGVRLESAIEQLDRDER AAIERNAAKLSVKLLMPTGLCFLPAFVLVGVIPAIASFMM
Sequences:
>Translated_200_residues MSTVWVRAAAGCAAIASWLYKVPVRHDSRLPCEEPAAAHDCGSSWTILILRMLQVSLRQGSSIPRALDMVGKAVGDDCGA RMSEVGSSLTRGVPWADAWHAAMAVQHEGAPADSPSGEDTNTTQRDLGLLQSALESSWTHGDMPGVRLESAIEQLDRDER AAIERNAAKLSVKLLMPTGLCFLPAFVLVGVIPAIASFMM >Mature_199_residues STVWVRAAAGCAAIASWLYKVPVRHDSRLPCEEPAAAHDCGSSWTILILRMLQVSLRQGSSIPRALDMVGKAVGDDCGAR MSEVGSSLTRGVPWADAWHAAMAVQHEGAPADSPSGEDTNTTQRDLGLLQSALESSWTHGDMPGVRLESAIEQLDRDERA AIERNAAKLSVKLLMPTGLCFLPAFVLVGVIPAIASFMM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21368; Mature: 21237
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVWVRAAAGCAAIASWLYKVPVRHDSRLPCEEPAAAHDCGSSWTILILRMLQVSLRQG CCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCC SSIPRALDMVGKAVGDDCGARMSEVGSSLTRGVPWADAWHAAMAVQHEGAPADSPSGEDT CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC NTTQRDLGLLQSALESSWTHGDMPGVRLESAIEQLDRDERAAIERNAAKLSVKLLMPTGL CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHEEEHHCCCCH CFLPAFVLVGVIPAIASFMM HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STVWVRAAAGCAAIASWLYKVPVRHDSRLPCEEPAAAHDCGSSWTILILRMLQVSLRQG CCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCC SSIPRALDMVGKAVGDDCGARMSEVGSSLTRGVPWADAWHAAMAVQHEGAPADSPSGEDT CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC NTTQRDLGLLQSALESSWTHGDMPGVRLESAIEQLDRDERAAIERNAAKLSVKLLMPTGL CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHEEEHHCCCCH CFLPAFVLVGVIPAIASFMM HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA