| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691053
Identifier: 213691053
GI number: 213691053
Start: 156765
End: 157358
Strand: Reverse
Name: 213691053
Synonym: Blon_0132
Alternate gene names: NA
Gene position: 157358-156765 (Counterclockwise)
Preceding gene: 213691054
Following gene: 213691040
Centisome position: 5.55
GC content: 57.58
Gene sequence:
>594_bases ATGATTTCGCTGTATATCGCAGGCGATAGCGTGCTGCATCGATGCCCTGCCGCAGTGAAACTCATCGTGTCACTGGTGAT GGCAACGGTATTGGTGATTCCGCACCTATCGTGGTGGGCGATAGCCGTCTGCGGCGCGCTATGCGCAATATGGTATGCCA TGTCCGGCCTTGGTCCGCACGTTTTTGCTCGTCAATTGTGGAGCGCGTGGTGGGTGGTGGCATTCACCGTGGTGGTGCAG GTGTTCTTTGTGCCATGGCAAACCACGGCGTTCAATGCGGTGCGCGTACTTGAACTGGTCATGATCGCAAATCTGGTAAC ACTCACCACCCGCACTGAAGACATGCTGGATACCGTGCTGGCAGCATTGCGGCCATTGCGACGATTCGGCGTCAATCCGG ACCGCATTGGGCTACTGTGCGCATTGACCATCTCAGCGATTCCACTGATTAATCGCAATGTGCGAATTGTGCGGGAAGCG AATCAGGCCCGTGGAGGTCACGGTGGCGTGACCGCATGGGCGGTGCCTCTGCTGGTGCTTATCCTGAAGCAGTCCGACGA GCTGGCCGATGCGCTCGATAGTCGTGGGCTGTAG
Upstream 100 bases:
>100_bases CCGATGGGCACATTATCGAAACCGGCGAGCCACGCCACGTTATCGCGCGATATCTTGCCGACTGCGGCGTCGCGGACAAC GAAGAAGCCGAGGCATCCCT
Downstream 100 bases:
>100_bases CTGATTCGACTGAACACAAGAAACCGCCGCTCCCGTATGAACGGGAACGGCGGTTTCTTGCTTGTACAAAGGGATTTAAT CCTAACGATCTCTCCCTCCG
Product: cobalt transport protein
Products: NA
Alternate protein names: Biotin Transporter Permease Protein; ABC Transport System Permease Protein; Integral Membrane Protein; ABC Transporter Inner Membrane Protein; ABC-Type Biotin Transport System Permease; ABC-Type Cobalt Transport System Permease; ABC Transporter Inner Membrane Subunit; Cobalt ABC Transporter Permease Protein; Cobalt Transport Family Protein; Cobalt/Biotin ABC Transporter Permease Protein; ABC-Type Cobalt Transport System Permease Protein; Biotin ABC Transporter Permease Protein; Biotin ABC Transport System Permease Protein; ABC Transporter Permease Protein
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MISLYIAGDSVLHRCPAAVKLIVSLVMATVLVIPHLSWWAIAVCGALCAIWYAMSGLGPHVFARQLWSAWWVVAFTVVVQ VFFVPWQTTAFNAVRVLELVMIANLVTLTTRTEDMLDTVLAALRPLRRFGVNPDRIGLLCALTISAIPLINRNVRIVREA NQARGGHGGVTAWAVPLLVLILKQSDELADALDSRGL
Sequences:
>Translated_197_residues MISLYIAGDSVLHRCPAAVKLIVSLVMATVLVIPHLSWWAIAVCGALCAIWYAMSGLGPHVFARQLWSAWWVVAFTVVVQ VFFVPWQTTAFNAVRVLELVMIANLVTLTTRTEDMLDTVLAALRPLRRFGVNPDRIGLLCALTISAIPLINRNVRIVREA NQARGGHGGVTAWAVPLLVLILKQSDELADALDSRGL >Mature_197_residues MISLYIAGDSVLHRCPAAVKLIVSLVMATVLVIPHLSWWAIAVCGALCAIWYAMSGLGPHVFARQLWSAWWVVAFTVVVQ VFFVPWQTTAFNAVRVLELVMIANLVTLTTRTEDMLDTVLAALRPLRRFGVNPDRIGLLCALTISAIPLINRNVRIVREA NQARGGHGGVTAWAVPLLVLILKQSDELADALDSRGL
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21563; Mature: 21563
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLYIAGDSVLHRCPAAVKLIVSLVMATVLVIPHLSWWAIAVCGALCAIWYAMSGLGPH CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH VFARQLWSAWWVVAFTVVVQVFFVPWQTTAFNAVRVLELVMIANLVTLTTRTEDMLDTVL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AALRPLRRFGVNPDRIGLLCALTISAIPLINRNVRIVREANQARGGHGGVTAWAVPLLVL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHEEHHHHCCCCCCCHHHHHHHHHHH ILKQSDELADALDSRGL HHHCCHHHHHHHHCCCC >Mature Secondary Structure MISLYIAGDSVLHRCPAAVKLIVSLVMATVLVIPHLSWWAIAVCGALCAIWYAMSGLGPH CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH VFARQLWSAWWVVAFTVVVQVFFVPWQTTAFNAVRVLELVMIANLVTLTTRTEDMLDTVL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AALRPLRRFGVNPDRIGLLCALTISAIPLINRNVRIVREANQARGGHGGVTAWAVPLLVL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHEEHHHHCCCCCCCHHHHHHHHHHH ILKQSDELADALDSRGL HHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA