Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213691053

Identifier: 213691053

GI number: 213691053

Start: 156765

End: 157358

Strand: Reverse

Name: 213691053

Synonym: Blon_0132

Alternate gene names: NA

Gene position: 157358-156765 (Counterclockwise)

Preceding gene: 213691054

Following gene: 213691040

Centisome position: 5.55

GC content: 57.58

Gene sequence:

>594_bases
ATGATTTCGCTGTATATCGCAGGCGATAGCGTGCTGCATCGATGCCCTGCCGCAGTGAAACTCATCGTGTCACTGGTGAT
GGCAACGGTATTGGTGATTCCGCACCTATCGTGGTGGGCGATAGCCGTCTGCGGCGCGCTATGCGCAATATGGTATGCCA
TGTCCGGCCTTGGTCCGCACGTTTTTGCTCGTCAATTGTGGAGCGCGTGGTGGGTGGTGGCATTCACCGTGGTGGTGCAG
GTGTTCTTTGTGCCATGGCAAACCACGGCGTTCAATGCGGTGCGCGTACTTGAACTGGTCATGATCGCAAATCTGGTAAC
ACTCACCACCCGCACTGAAGACATGCTGGATACCGTGCTGGCAGCATTGCGGCCATTGCGACGATTCGGCGTCAATCCGG
ACCGCATTGGGCTACTGTGCGCATTGACCATCTCAGCGATTCCACTGATTAATCGCAATGTGCGAATTGTGCGGGAAGCG
AATCAGGCCCGTGGAGGTCACGGTGGCGTGACCGCATGGGCGGTGCCTCTGCTGGTGCTTATCCTGAAGCAGTCCGACGA
GCTGGCCGATGCGCTCGATAGTCGTGGGCTGTAG

Upstream 100 bases:

>100_bases
CCGATGGGCACATTATCGAAACCGGCGAGCCACGCCACGTTATCGCGCGATATCTTGCCGACTGCGGCGTCGCGGACAAC
GAAGAAGCCGAGGCATCCCT

Downstream 100 bases:

>100_bases
CTGATTCGACTGAACACAAGAAACCGCCGCTCCCGTATGAACGGGAACGGCGGTTTCTTGCTTGTACAAAGGGATTTAAT
CCTAACGATCTCTCCCTCCG

Product: cobalt transport protein

Products: NA

Alternate protein names: Biotin Transporter Permease Protein; ABC Transport System Permease Protein; Integral Membrane Protein; ABC Transporter Inner Membrane Protein; ABC-Type Biotin Transport System Permease; ABC-Type Cobalt Transport System Permease; ABC Transporter Inner Membrane Subunit; Cobalt ABC Transporter Permease Protein; Cobalt Transport Family Protein; Cobalt/Biotin ABC Transporter Permease Protein; ABC-Type Cobalt Transport System Permease Protein; Biotin ABC Transporter Permease Protein; Biotin ABC Transport System Permease Protein; ABC Transporter Permease Protein

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MISLYIAGDSVLHRCPAAVKLIVSLVMATVLVIPHLSWWAIAVCGALCAIWYAMSGLGPHVFARQLWSAWWVVAFTVVVQ
VFFVPWQTTAFNAVRVLELVMIANLVTLTTRTEDMLDTVLAALRPLRRFGVNPDRIGLLCALTISAIPLINRNVRIVREA
NQARGGHGGVTAWAVPLLVLILKQSDELADALDSRGL

Sequences:

>Translated_197_residues
MISLYIAGDSVLHRCPAAVKLIVSLVMATVLVIPHLSWWAIAVCGALCAIWYAMSGLGPHVFARQLWSAWWVVAFTVVVQ
VFFVPWQTTAFNAVRVLELVMIANLVTLTTRTEDMLDTVLAALRPLRRFGVNPDRIGLLCALTISAIPLINRNVRIVREA
NQARGGHGGVTAWAVPLLVLILKQSDELADALDSRGL
>Mature_197_residues
MISLYIAGDSVLHRCPAAVKLIVSLVMATVLVIPHLSWWAIAVCGALCAIWYAMSGLGPHVFARQLWSAWWVVAFTVVVQ
VFFVPWQTTAFNAVRVLELVMIANLVTLTTRTEDMLDTVLAALRPLRRFGVNPDRIGLLCALTISAIPLINRNVRIVREA
NQARGGHGGVTAWAVPLLVLILKQSDELADALDSRGL

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21563; Mature: 21563

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISLYIAGDSVLHRCPAAVKLIVSLVMATVLVIPHLSWWAIAVCGALCAIWYAMSGLGPH
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH
VFARQLWSAWWVVAFTVVVQVFFVPWQTTAFNAVRVLELVMIANLVTLTTRTEDMLDTVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AALRPLRRFGVNPDRIGLLCALTISAIPLINRNVRIVREANQARGGHGGVTAWAVPLLVL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHEEHHHHCCCCCCCHHHHHHHHHHH
ILKQSDELADALDSRGL
HHHCCHHHHHHHHCCCC
>Mature Secondary Structure
MISLYIAGDSVLHRCPAAVKLIVSLVMATVLVIPHLSWWAIAVCGALCAIWYAMSGLGPH
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH
VFARQLWSAWWVVAFTVVVQVFFVPWQTTAFNAVRVLELVMIANLVTLTTRTEDMLDTVL
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AALRPLRRFGVNPDRIGLLCALTISAIPLINRNVRIVREANQARGGHGGVTAWAVPLLVL
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHEEHHHHCCCCCCCHHHHHHHHHHH
ILKQSDELADALDSRGL
HHHCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA