Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is ureH [H]

Identifier: 213691036

GI number: 213691036

Start: 135948

End: 136802

Strand: Direct

Name: ureH [H]

Synonym: Blon_0115

Alternate gene names: 213691036

Gene position: 135948-136802 (Clockwise)

Preceding gene: 213691035

Following gene: 213691037

Centisome position: 4.8

GC content: 63.39

Gene sequence:

>855_bases
ATGCCGGAAAGCACATTCCGCATGTCCACGGCGTTCCGTCATGGGCGCACCAAAGTGGACGACCTGTATTTCGAGGCGCC
ATTCAAGCTGATGACGCCGTTTCATGACGGCGCGCACACGGATTGCATGGTCATGCTCGCATCCCCCGGTTTCCTTGGCG
GCGATGTGGCGCATATCGATTGCACGTTCGGAGCCGATACCGATACGACGATGCGCACGCAGAGCTACGAGAAAGTACTC
GACACGGCTGACGGCGAGGCGAAACGAACCATCGACCTGACGGTGCTGGACAACGCGAAAGCCGTGTTCCTGCCGTTCCC
GGTCATCCCGTTCGCGCACTCGGTGTTCTCGAACGTCACGAACGCCCATATCGGTGCGCAATCGTCATTCATGTATGCGG
ATGTGGTCACCTGTGGTCGCGTGGGCATGGGGGAGCGGTGGAAGATGCGGCGGTTCAGCAGCTCCACTCGCGTCTATGTG
GACGAGACGAGCGAGGAGGGCGGTCCCCGGTCTCGCCCCCGTGGCGACGGGGAGGAATCCGCCCCGCGTCTGGTCTTCGC
CGACCGCCTGCTGCTTGAACCGGACCGCTTCACGTATACGGATACGGCCATGTGGCGGGAGTTCACCCACTGCGGCATGG
CCTATCTGCACGTTCCCCGCCGGGAATCAAGGCGGACGCAGATGACGGCGGAGGACGAGCTCGTCGAACGGATTCGTGCA
CTGGCGCACGATCGTGGGCCGAGAGGCGAGATCGGCGTGAGCCGCCAGAACGAGGGGATCGCGGTGCGTCTGCTCACCGA
CCGTGGGGACGACGCCTTCGGGTTCCTTGCCGAAGTCGCGCAATTGCTGCGGTAG

Upstream 100 bases:

>100_bases
ATCGCATGGATCAGGAAATCGGTCTTGTTCGAGGACATGCGGTGACGGCATGAATCACGCCATCGCACGACCACGCACCG
CACGACCGTAAGAGGGGCGT

Downstream 100 bases:

>100_bases
ATAACCGAACACTCGCGCACGGCGTGTCGACATGCTCCTTGACGAGACCCGGAAACTGGTCGATGACCTCTCCGCCGCAC
TGTTGCGCGTCGAACGCATC

Product: Urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MPESTFRMSTAFRHGRTKVDDLYFEAPFKLMTPFHDGAHTDCMVMLASPGFLGGDVAHIDCTFGADTDTTMRTQSYEKVL
DTADGEAKRTIDLTVLDNAKAVFLPFPVIPFAHSVFSNVTNAHIGAQSSFMYADVVTCGRVGMGERWKMRRFSSSTRVYV
DETSEEGGPRSRPRGDGEESAPRLVFADRLLLEPDRFTYTDTAMWREFTHCGMAYLHVPRRESRRTQMTAEDELVERIRA
LAHDRGPRGEIGVSRQNEGIAVRLLTDRGDDAFGFLAEVAQLLR

Sequences:

>Translated_284_residues
MPESTFRMSTAFRHGRTKVDDLYFEAPFKLMTPFHDGAHTDCMVMLASPGFLGGDVAHIDCTFGADTDTTMRTQSYEKVL
DTADGEAKRTIDLTVLDNAKAVFLPFPVIPFAHSVFSNVTNAHIGAQSSFMYADVVTCGRVGMGERWKMRRFSSSTRVYV
DETSEEGGPRSRPRGDGEESAPRLVFADRLLLEPDRFTYTDTAMWREFTHCGMAYLHVPRRESRRTQMTAEDELVERIRA
LAHDRGPRGEIGVSRQNEGIAVRLLTDRGDDAFGFLAEVAQLLR
>Mature_283_residues
PESTFRMSTAFRHGRTKVDDLYFEAPFKLMTPFHDGAHTDCMVMLASPGFLGGDVAHIDCTFGADTDTTMRTQSYEKVLD
TADGEAKRTIDLTVLDNAKAVFLPFPVIPFAHSVFSNVTNAHIGAQSSFMYADVVTCGRVGMGERWKMRRFSSSTRVYVD
ETSEEGGPRSRPRGDGEESAPRLVFADRLLLEPDRFTYTDTAMWREFTHCGMAYLHVPRRESRRTQMTAEDELVERIRAL
AHDRGPRGEIGVSRQNEGIAVRLLTDRGDDAFGFLAEVAQLLR

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 31888; Mature: 31757

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPESTFRMSTAFRHGRTKVDDLYFEAPFKLMTPFHDGAHTDCMVMLASPGFLGGDVAHID
CCCCHHHHHHHHHCCCCCHHHEEEECCHHEECCCCCCCCCCEEEEEECCCCCCCCEEEEE
CTFGADTDTTMRTQSYEKVLDTADGEAKRTIDLTVLDNAKAVFLPFPVIPFAHSVFSNVT
EEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHH
NAHIGAQSSFMYADVVTCGRVGMGERWKMRRFSSSTRVYVDETSEEGGPRSRPRGDGEES
HCCCCCCCCEEEEHHHHHCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCC
APRLVFADRLLLEPDRFTYTDTAMWREFTHCGMAYLHVPRRESRRTQMTAEDELVERIRA
CCEEEEEHHHEECCCCCEECHHHHHHHHHHCCEEEEECCCHHHHHHCCCHHHHHHHHHHH
LAHDRGPRGEIGVSRQNEGIAVRLLTDRGDDAFGFLAEVAQLLR
HHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHC
>Mature Secondary Structure 
PESTFRMSTAFRHGRTKVDDLYFEAPFKLMTPFHDGAHTDCMVMLASPGFLGGDVAHID
CCCHHHHHHHHHCCCCCHHHEEEECCHHEECCCCCCCCCCEEEEEECCCCCCCCEEEEE
CTFGADTDTTMRTQSYEKVLDTADGEAKRTIDLTVLDNAKAVFLPFPVIPFAHSVFSNVT
EEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHH
NAHIGAQSSFMYADVVTCGRVGMGERWKMRRFSSSTRVYVDETSEEGGPRSRPRGDGEES
HCCCCCCCCEEEEHHHHHCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCC
APRLVFADRLLLEPDRFTYTDTAMWREFTHCGMAYLHVPRRESRRTQMTAEDELVERIRA
CCEEEEEHHHEECCCCCEECHHHHHHHHHHCCEEEEECCCHHHHHHCCCHHHHHHHHHHH
LAHDRGPRGEIGVSRQNEGIAVRLLTDRGDDAFGFLAEVAQLLR
HHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12810954 [H]