| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is ureE
Identifier: 213691033
GI number: 213691033
Start: 133721
End: 134386
Strand: Direct
Name: ureE
Synonym: Blon_0112
Alternate gene names: 213691033
Gene position: 133721-134386 (Clockwise)
Preceding gene: 213691032
Following gene: 213691034
Centisome position: 4.72
GC content: 59.46
Gene sequence:
>666_bases ATGCAAACGAAAGGCGGCAGCAGGCTCATGATCGCCAACCGCATCTCCGGCAACATCATTTCGGACACATTCTCCGACGG CAAGCTGAACGTTCCGATCGAATTCGAATGGTTCGAGGCCGATAAGAAGCGCATGCGCAAAGTCGCCGCCGACGGCACCG AGTTCGGCGTCGCGGTCGGCGCCACCATCGCAGACGGCGATGTGCTCGCCGAAACCGCCGACAAACGATATTTCGCCCGT ATCCGCACCGCGCAGCTCATCGAGATTCCGGTGCATTCCATGAAGGAGATGGGGCGTCTGTGCTTCGAACTGGGCAACCG CCATCTCAGCCTGAAGGTGGAGGACGACCGCGTGCTGGTGCCATACGACCATCCGACCATGGAATACACGAAGAAGATCG GATTCGATCCGCGCGTCATCGAGGGCGGATTCGACGGATTCCTCATCGTCAAAGCGCATGCCGGCGCCGGCACCATCGTT CCTGGCACGAACAAAACCACCGGCGATCTGGCCGAAGAAGAGCAGGAGACCGAACGGCATGAGCCCCACGCCCATGCCAT CGGCGAACATCACCACGAGAAAAGCGAATACGAAGTTAACGGCGTATTGCATCGCGCCGACGGCATGCATTCGCACGATC ACGGCCAAACCTGGCATATGCACTGA
Upstream 100 bases:
>100_bases CCCGCACACCGGAAAGGAGGGCCTCGTTGCCGAATCGTTTCCCCGTGTTTACATGCCCGCCCTTTTCGGCGTCTAGCGTT CTGCGTGACCATCACAGGCA
Downstream 100 bases:
>100_bases TGCCGTCCGTACACATGAAGGAACACACGATGCCCCATGCCGGCTCCCCGGCGGATGAATGCGCCCTGCGTCATCTTGCG ATGCTGCAGGTGTGCGACAG
Product: UreE urease accessory domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MQTKGGSRLMIANRISGNIISDTFSDGKLNVPIEFEWFEADKKRMRKVAADGTEFGVAVGATIADGDVLAETADKRYFAR IRTAQLIEIPVHSMKEMGRLCFELGNRHLSLKVEDDRVLVPYDHPTMEYTKKIGFDPRVIEGGFDGFLIVKAHAGAGTIV PGTNKTTGDLAEEEQETERHEPHAHAIGEHHHEKSEYEVNGVLHRADGMHSHDHGQTWHMH
Sequences:
>Translated_221_residues MQTKGGSRLMIANRISGNIISDTFSDGKLNVPIEFEWFEADKKRMRKVAADGTEFGVAVGATIADGDVLAETADKRYFAR IRTAQLIEIPVHSMKEMGRLCFELGNRHLSLKVEDDRVLVPYDHPTMEYTKKIGFDPRVIEGGFDGFLIVKAHAGAGTIV PGTNKTTGDLAEEEQETERHEPHAHAIGEHHHEKSEYEVNGVLHRADGMHSHDHGQTWHMH >Mature_221_residues MQTKGGSRLMIANRISGNIISDTFSDGKLNVPIEFEWFEADKKRMRKVAADGTEFGVAVGATIADGDVLAETADKRYFAR IRTAQLIEIPVHSMKEMGRLCFELGNRHLSLKVEDDRVLVPYDHPTMEYTKKIGFDPRVIEGGFDGFLIVKAHAGAGTIV PGTNKTTGDLAEEEQETERHEPHAHAIGEHHHEKSEYEVNGVLHRADGMHSHDHGQTWHMH
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UREE_BIFLI (B7GT18)
Other databases:
- EMBL: CP001095 - RefSeq: YP_002321619.1 - GeneID: 7054111 - GenomeReviews: CP001095_GR - KEGG: bln:Blon_0112 - GO: GO:0005737 - HAMAP: MF_00822 - InterPro: IPR012406 - InterPro: IPR007864 - Gene3D: G3DSA:3.30.70.790
Pfam domain/function: PF05194 UreE_C; SSF69737 UreE_C
EC number: NA
Molecular weight: Translated: 24703; Mature: 24703
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTKGGSRLMIANRISGNIISDTFSDGKLNVPIEFEWFEADKKRMRKVAADGTEFGVAVG CCCCCCCEEEEEECCCCCEEECCCCCCEEECCEEEEEEHHHHHHHHHHHCCCCCCCEEEE ATIADGDVLAETADKRYFARIRTAQLIEIPVHSMKEMGRLCFELGNRHLSLKVEDDRVLV CEECCCCHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCEEEE PYDHPTMEYTKKIGFDPRVIEGGFDGFLIVKAHAGAGTIVPGTNKTTGDLAEEEQETERH ECCCCHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHC EPHAHAIGEHHHEKSEYEVNGVLHRADGMHSHDHGQTWHMH CCCHHHHHHHCCCCCCEEECEEEECCCCCCCCCCCEEECCC >Mature Secondary Structure MQTKGGSRLMIANRISGNIISDTFSDGKLNVPIEFEWFEADKKRMRKVAADGTEFGVAVG CCCCCCCEEEEEECCCCCEEECCCCCCEEECCEEEEEEHHHHHHHHHHHCCCCCCCEEEE ATIADGDVLAETADKRYFARIRTAQLIEIPVHSMKEMGRLCFELGNRHLSLKVEDDRVLV CEECCCCHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCEEEE PYDHPTMEYTKKIGFDPRVIEGGFDGFLIVKAHAGAGTIVPGTNKTTGDLAEEEQETERH ECCCCHHHHHHHCCCCCEEEECCCCEEEEEEEECCCCEEECCCCCCCCCHHHHHHHHHHC EPHAHAIGEHHHEKSEYEVNGVLHRADGMHSHDHGQTWHMH CCCHHHHHHHCCCCCCEEECEEEECCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA