| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is cadA [H]
Identifier: 213691024
GI number: 213691024
Start: 122187
End: 124349
Strand: Direct
Name: cadA [H]
Synonym: Blon_0103
Alternate gene names: 213691024
Gene position: 122187-124349 (Clockwise)
Preceding gene: 213691023
Following gene: 213691025
Centisome position: 4.31
GC content: 67.08
Gene sequence:
>2163_bases ATGAGCGCACTCATCAGATTCTTCACCAAAATCCTCGATATTTGCCGGCTTGTACCGATGCTTCCGGTCGTCGTCATCGC CGCGATTCCGTTGGCTTTACTAGGCGATTGGCATCCTTGGGGGCACGCGGCCGACATTGCGATGCTGGGCGATCCGGGCT TCGGCCAATGGCTCATCATCGCGCTGGTGCTGATCATCGTGGCCGACACCGTGCGCGGCATGATCGACGATCTGCGGCAC GGGCAGGTCGGCGTCGATCTGCTGGCCGTGGTCGCGATTCTCTCTACTGTGGCCGTCCACGAATACTGGGCGAGCTGGGC GGTGATGCTGATGGTCACGTCCGGTGAAGCCATCGAGGAGTACGCCCAGGCCAAGGCCGAACACAGTCTGACCGCACTGA TGGAAGCGGCGCCGCGGACCGCGCACGTCGTCAGCCTCCCCGGCGTGGGACGCGACTCGGCAGGCGATGCCGGCGATGCA TCCGAGGGCTTCCGCCGCGTGGGCCAGTTTGCGACGGCGTCGGCCGCGCATCGATTCGATACGGTGCCGGTCGAACAGGT GCGGCTCGGCGACGTGCTGATGGTGTTGCCGGGCGAAACCGTGCCGGTTGACGGCGAACTGTTGTCGGGCTCGGCCACGC TTGACCTGAGCGACATCAACGGCGAGCCGGTGCCGCGTGAAGTGTTCGCCGGCGCCCGCGTGATGTCCGGCGCGGTGAAC GGCTCGACTGCATTGACCATGCGTGCCACCCAAGTGGCCGCCGATTCGCAGTACCAGCGCATCCTCGAGCTCGTGGCCTC CGCGCAGGAATCGCGGCCAGCCGTGGTGAAAACCGCTGACCGCTTGGCCGTGCCCTTCACCGTGCTTTCGTTGGTGATTG CCGGCGTCGCATGGGCGGTGTCCGGGGTGCCGACGCGATTCGCCCAGGTGCTGGTGTTGGCCACGCCCTGCCCGCTGCTC ATCGCCGCACCGGTGGCGTACATCGCCGGCACGGGTCGTCTCGCCGCGGCCGGCGTGCTGATCAAGGCGCAGGATGTGCT GGAGAATCTCGGCCGCGTCACCCAGGTGTTCTTCGACAAGACCGGCACGCTCACCGTCAAACAACCGCAAGTGGTGCGCG TCGAGATGCTGCCCGGCGCGGCGACCCAGTTCGACGGGGACCATGTGCTGATGATGGCCGGCGTGGTGGAAAGCTATTCG GTGCATATCCTGTCCAAAGGCATCGCCAAGGCCGGAACGGAGGCGATGGCCAGACTGCGCCGGCAGTCCGAGAACGATGG GCGGCCATGCCCCGAGTCGGACGCCGTCTGGTTCGGCGTCGGCCGCGAGCATCCGGTCGTCAAGGGCATCAACGAGGAGG CCGGCAAGGGCGTTTCCGGCGAGGTGAACGGACACGTGGTGCGTGTGGGCCGGCTGTCGTTTGCCGCCGCCGGGAAGGAC GGATTCCTGACGGCCGGCAACGCCGACCCCACTGGCCCGCGTCACGACCCGCGGCCCGGAACGGAGGCCGCCGGCGGAAC GGAAGAGGATGTCCGCACGCGCTTCGGCCTGCTGCAGCCGGACGAGATGGCATCCTACGTGTCCATCGACGGCCGATTGA TCGCACGCATCGTGCTGCGTGATGTGCCGCGCGCCAATGCCGGGACGGCGCTCGCCAAACTGCATGCGCTGGGCGTCGCC AGACTCGCCATGCTCACCGGCGACAAGCGCGCCTCGGCCGACATCATCGCGAACGAGGTCGGCATTGACGAGGTCCACGC CGAACTCTTCCCCGAAGACAAGGTCGCCGCCGTCAAGTCCGCCGCGGAAGACGGCAACGCCGTCACGATGATGGTCGGTG ACGGCGTGAACGACGCCCCGGTGCTCGCCGTCGCCGACATCGGCGTGGCCATGACCGACGGCACCTCCACCGCCGCCTCC GAAAGCGCCCAGGTGGTCATCATGACCGATGACATCGCGGCCGTGCCGCGCGCCATCGCCATCGCCCGCCGCACCAAGCG TGTGATGCTGCAAGCCGTTATCGTCGGTCTTGCGCTCGCCGTGATCGGCATGATCGCCGCCGCGTTCGATCTCATTCCGG TCGTCGTCGGCGCATTCCTCCAGGAGGCCATCGACGTGGTGAGCATCCTCTGGGGCCTCACCGCCCTGATCGATCGAGAT TAG
Upstream 100 bases:
>100_bases AGGCATGGACGCCGGTGGGTTAACAAGGCGTGACCACAGCGCCGATTGCGCGGGCCACGCTTGCCGCAATCGACTCCGTA TACGAGCGTAAGGAGCAATG
Downstream 100 bases:
>100_bases GGGACACGGCCCGCCGCGTACCGCGACATGGAGCCGGCCGCCGCACCGATCGCATATCGGTGCGGCGGCCGGCTTGTTTT TTGTCGTCGCTCTTCTTGCG
Product: ATPase P
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 720; Mature: 719
Protein sequence:
>720_residues MSALIRFFTKILDICRLVPMLPVVVIAAIPLALLGDWHPWGHAADIAMLGDPGFGQWLIIALVLIIVADTVRGMIDDLRH GQVGVDLLAVVAILSTVAVHEYWASWAVMLMVTSGEAIEEYAQAKAEHSLTALMEAAPRTAHVVSLPGVGRDSAGDAGDA SEGFRRVGQFATASAAHRFDTVPVEQVRLGDVLMVLPGETVPVDGELLSGSATLDLSDINGEPVPREVFAGARVMSGAVN GSTALTMRATQVAADSQYQRILELVASAQESRPAVVKTADRLAVPFTVLSLVIAGVAWAVSGVPTRFAQVLVLATPCPLL IAAPVAYIAGTGRLAAAGVLIKAQDVLENLGRVTQVFFDKTGTLTVKQPQVVRVEMLPGAATQFDGDHVLMMAGVVESYS VHILSKGIAKAGTEAMARLRRQSENDGRPCPESDAVWFGVGREHPVVKGINEEAGKGVSGEVNGHVVRVGRLSFAAAGKD GFLTAGNADPTGPRHDPRPGTEAAGGTEEDVRTRFGLLQPDEMASYVSIDGRLIARIVLRDVPRANAGTALAKLHALGVA RLAMLTGDKRASADIIANEVGIDEVHAELFPEDKVAAVKSAAEDGNAVTMMVGDGVNDAPVLAVADIGVAMTDGTSTAAS ESAQVVIMTDDIAAVPRAIAIARRTKRVMLQAVIVGLALAVIGMIAAAFDLIPVVVGAFLQEAIDVVSILWGLTALIDRD
Sequences:
>Translated_720_residues MSALIRFFTKILDICRLVPMLPVVVIAAIPLALLGDWHPWGHAADIAMLGDPGFGQWLIIALVLIIVADTVRGMIDDLRH GQVGVDLLAVVAILSTVAVHEYWASWAVMLMVTSGEAIEEYAQAKAEHSLTALMEAAPRTAHVVSLPGVGRDSAGDAGDA SEGFRRVGQFATASAAHRFDTVPVEQVRLGDVLMVLPGETVPVDGELLSGSATLDLSDINGEPVPREVFAGARVMSGAVN GSTALTMRATQVAADSQYQRILELVASAQESRPAVVKTADRLAVPFTVLSLVIAGVAWAVSGVPTRFAQVLVLATPCPLL IAAPVAYIAGTGRLAAAGVLIKAQDVLENLGRVTQVFFDKTGTLTVKQPQVVRVEMLPGAATQFDGDHVLMMAGVVESYS VHILSKGIAKAGTEAMARLRRQSENDGRPCPESDAVWFGVGREHPVVKGINEEAGKGVSGEVNGHVVRVGRLSFAAAGKD GFLTAGNADPTGPRHDPRPGTEAAGGTEEDVRTRFGLLQPDEMASYVSIDGRLIARIVLRDVPRANAGTALAKLHALGVA RLAMLTGDKRASADIIANEVGIDEVHAELFPEDKVAAVKSAAEDGNAVTMMVGDGVNDAPVLAVADIGVAMTDGTSTAAS ESAQVVIMTDDIAAVPRAIAIARRTKRVMLQAVIVGLALAVIGMIAAAFDLIPVVVGAFLQEAIDVVSILWGLTALIDRD >Mature_719_residues SALIRFFTKILDICRLVPMLPVVVIAAIPLALLGDWHPWGHAADIAMLGDPGFGQWLIIALVLIIVADTVRGMIDDLRHG QVGVDLLAVVAILSTVAVHEYWASWAVMLMVTSGEAIEEYAQAKAEHSLTALMEAAPRTAHVVSLPGVGRDSAGDAGDAS EGFRRVGQFATASAAHRFDTVPVEQVRLGDVLMVLPGETVPVDGELLSGSATLDLSDINGEPVPREVFAGARVMSGAVNG STALTMRATQVAADSQYQRILELVASAQESRPAVVKTADRLAVPFTVLSLVIAGVAWAVSGVPTRFAQVLVLATPCPLLI AAPVAYIAGTGRLAAAGVLIKAQDVLENLGRVTQVFFDKTGTLTVKQPQVVRVEMLPGAATQFDGDHVLMMAGVVESYSV HILSKGIAKAGTEAMARLRRQSENDGRPCPESDAVWFGVGREHPVVKGINEEAGKGVSGEVNGHVVRVGRLSFAAAGKDG FLTAGNADPTGPRHDPRPGTEAAGGTEEDVRTRFGLLQPDEMASYVSIDGRLIARIVLRDVPRANAGTALAKLHALGVAR LAMLTGDKRASADIIANEVGIDEVHAELFPEDKVAAVKSAAEDGNAVTMMVGDGVNDAPVLAVADIGVAMTDGTSTAASE SAQVVIMTDDIAAVPRAIAIARRTKRVMLQAVIVGLALAVIGMIAAAFDLIPVVVGAFLQEAIDVVSILWGLTALIDRD
Specific function: Couples the hydrolysis of ATP with the transport of cadmium, zinc and cobalt out of the cell. Does not seem to transport copper [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=673, Percent_Identity=31.3521545319465, Blast_Score=218, Evalue=2e-56, Organism=Homo sapiens, GI55743073, Length=525, Percent_Identity=33.3333333333333, Blast_Score=199, Evalue=1e-50, Organism=Homo sapiens, GI115529486, Length=267, Percent_Identity=33.7078651685393, Blast_Score=127, Evalue=5e-29, Organism=Homo sapiens, GI28373107, Length=226, Percent_Identity=26.9911504424779, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI28373105, Length=226, Percent_Identity=26.9911504424779, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI28373115, Length=226, Percent_Identity=27.4336283185841, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI28373111, Length=226, Percent_Identity=27.4336283185841, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI28373109, Length=226, Percent_Identity=27.4336283185841, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI28373103, Length=226, Percent_Identity=27.4336283185841, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI28373113, Length=226, Percent_Identity=27.4336283185841, Blast_Score=69, Evalue=2e-11, Organism=Escherichia coli, GI1786691, Length=713, Percent_Identity=30.5750350631136, Blast_Score=220, Evalue=2e-58, Organism=Escherichia coli, GI1789879, Length=686, Percent_Identity=28.4256559766764, Blast_Score=186, Evalue=6e-48, Organism=Escherichia coli, GI1786914, Length=115, Percent_Identity=40.8695652173913, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17556548, Length=697, Percent_Identity=27.9770444763271, Blast_Score=182, Evalue=7e-46, Organism=Saccharomyces cerevisiae, GI6320475, Length=640, Percent_Identity=26.09375, Blast_Score=166, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6319772, Length=513, Percent_Identity=24.7563352826511, Blast_Score=116, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6321271, Length=202, Percent_Identity=28.7128712871287, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI221329854, Length=446, Percent_Identity=26.457399103139, Blast_Score=110, Evalue=4e-24, Organism=Drosophila melanogaster, GI24762455, Length=231, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI24762453, Length=231, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI24762447, Length=231, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI24762457, Length=231, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI24762449, Length=231, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI24762445, Length=231, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI24762451, Length=231, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI17136664, Length=231, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR001366 - InterPro: IPR006404 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: =3.6.3.3; =3.6.3.5 [H]
Molecular weight: Translated: 75249; Mature: 75118
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00154 ATPASE_E1_E2 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALIRFFTKILDICRLVPMLPVVVIAAIPLALLGDWHPWGHAADIAMLGDPGFGQWLII CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHH ALVLIIVADTVRGMIDDLRHGQVGVDLLAVVAILSTVAVHEYWASWAVMLMVTSGEAIEE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHH YAQAKAEHSLTALMEAAPRTAHVVSLPGVGRDSAGDAGDASEGFRRVGQFATASAAHRFD HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC TVPVEQVRLGDVLMVLPGETVPVDGELLSGSATLDLSDINGEPVPREVFAGARVMSGAVN CCCHHHEECCCEEEEECCCCCCCCCCEECCCEEEEEECCCCCCCCHHHHHCHHHHHCCCC GSTALTMRATQVAADSQYQRILELVASAQESRPAVVKTADRLAVPFTVLSLVIAGVAWAV CCEEEEEEHHHHHCCHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHH SGVPTRFAQVLVLATPCPLLIAAPVAYIAGTGRLAAAGVLIKAQDVLENLGRVTQVFFDK CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHEEEHHHHHHHHHHHHHHHHCC TGTLTVKQPQVVRVEMLPGAATQFDGDHVLMMAGVVESYSVHILSKGIAKAGTEAMARLR CCEEEECCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHH RQSENDGRPCPESDAVWFGVGREHPVVKGINEEAGKGVSGEVNGHVVRVGRLSFAAAGKD HCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECEEEEECCCC GFLTAGNADPTGPRHDPRPGTEAAGGTEEDVRTRFGLLQPDEMASYVSIDGRLIARIVLR CEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHH DVPRANAGTALAKLHALGVARLAMLTGDKRASADIIANEVGIDEVHAELFPEDKVAAVKS HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHH AAEDGNAVTMMVGDGVNDAPVLAVADIGVAMTDGTSTAASESAQVVIMTDDIAAVPRAIA HCCCCCEEEEEECCCCCCCCEEEEEECCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHH IARRTKRVMLQAVIVGLALAVIGMIAAAFDLIPVVVGAFLQEAIDVVSILWGLTALIDRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SALIRFFTKILDICRLVPMLPVVVIAAIPLALLGDWHPWGHAADIAMLGDPGFGQWLII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHH ALVLIIVADTVRGMIDDLRHGQVGVDLLAVVAILSTVAVHEYWASWAVMLMVTSGEAIEE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHH YAQAKAEHSLTALMEAAPRTAHVVSLPGVGRDSAGDAGDASEGFRRVGQFATASAAHRFD HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC TVPVEQVRLGDVLMVLPGETVPVDGELLSGSATLDLSDINGEPVPREVFAGARVMSGAVN CCCHHHEECCCEEEEECCCCCCCCCCEECCCEEEEEECCCCCCCCHHHHHCHHHHHCCCC GSTALTMRATQVAADSQYQRILELVASAQESRPAVVKTADRLAVPFTVLSLVIAGVAWAV CCEEEEEEHHHHHCCHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHH SGVPTRFAQVLVLATPCPLLIAAPVAYIAGTGRLAAAGVLIKAQDVLENLGRVTQVFFDK CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHEEEHHHHHHHHHHHHHHHHCC TGTLTVKQPQVVRVEMLPGAATQFDGDHVLMMAGVVESYSVHILSKGIAKAGTEAMARLR CCEEEECCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHH RQSENDGRPCPESDAVWFGVGREHPVVKGINEEAGKGVSGEVNGHVVRVGRLSFAAAGKD HCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECEEEEECCCC GFLTAGNADPTGPRHDPRPGTEAAGGTEEDVRTRFGLLQPDEMASYVSIDGRLIARIVLR CEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHH DVPRANAGTALAKLHALGVARLAMLTGDKRASADIIANEVGIDEVHAELFPEDKVAAVKS HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHH AAEDGNAVTMMVGDGVNDAPVLAVADIGVAMTDGTSTAASESAQVVIMTDDIAAVPRAIA HCCCCCEEEEEECCCCCCCCEEEEEECCEEEECCCCCCCCCCCEEEEEECCHHHHHHHHH IARRTKRVMLQAVIVGLALAVIGMIAAAFDLIPVVVGAFLQEAIDVVSILWGLTALIDRD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]