| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is glgP [H]
Identifier: 213690992
GI number: 213690992
Start: 82496
End: 85021
Strand: Direct
Name: glgP [H]
Synonym: Blon_0070
Alternate gene names: 213690992
Gene position: 82496-85021 (Clockwise)
Preceding gene: 213690990
Following gene: 213690994
Centisome position: 2.91
GC content: 61.6
Gene sequence:
>2526_bases ATGCTTACGTTTGTGAGACGATACCTATCGCGCGGCATAATAATTACGGGCACTTATCCCGGAAGGAAAGTCAGAATGAC CGAAATCACCGCACCGAAGTCTCCCGTCACGGCGGAACAATTCGCCGACGAGATTCGTGAACAACTGAAATACACTCAAA ACGTCACCGCCGAGCAGGCCACCCCTGCTGACGTGTATGTCGCCGCGTCCAAAGCCGTGCGCAACCACCTCGCCGACTCC TGGTTCAAGACCCAGGCCGACACCGTCAACGGCAACACCAAGGCCGTCGGCTACCTGTCCGCCGAGTTCTTGATGGGCAA GCAGCTGGAGAACGCACTGCTGAACGCTGGCCTGACCGACCAGTTCGACAAGGCTGTGGAAGCCCTTGGCTTCAAGCCGA AGGACATCGTGGACGCCGAATACGAGCCGGGCCTCGGCAACGGCGGCCTTGGTCGTCTGGCCGCCTGCTTCATCGACTCC CTCGCCTCGCTGGGCGTGCCGGCCTTCGGCTACGGCATCCAGTACAAGTACGGCATCTTCAAGCAGAAGTTCGACGAGAA CGGCAAGCAGGTTGAGACCCCGGATTACTGGCTGGCCAACGAAGAGCCGTGGGGCCACACCGACTACAACCGTGATCAGA AGGTCTCCTTCGGTGGCAAGGTCGTCGAGAACGCCGACGGCACCAAGACCTGGCAGCCCGCATGGTCCGTGCGCGCCGTG CCGGTGGACTACCTGGTCCCTGGCTACAAGTCCGGCCGCGTGAACACCCTGCGCCTGTGGACCGCCAAGAGCTACGACGA GTTCGATCTGCTCGCCTTCAACCGCTCCGAGTACATGGACGCCGTGGCCCCGCAGGTCAAGGCCGAGAACATCTCCAAGA TTCTCTACCCGGAAGACTCCACCAAGGTCGGTAAGGAACTGCGCCTCGAGCAGCAGTACTTCTTCGTCTCCGCATCCCTG CACGACGCCATCCGCGTCTTCTACCCGGGCCAGGACAAGCCGGACCTGACGACCTTCCCGAACAAGATCGTCTTCCAGCT CAACGACACCCACCCGGTGATCGGCATCCCCGAGCTCATGCGCATCCTCATCGATGAGTACGGCTACGACTGGGATACCG CGTGGTCCATCACCACCAAGACCTTCAACTACACCTGCCACACCCTGCTGCCGGAGGCCCTTGAGGTCTGGCCGGCCAGC CTGATCGGCGAGCTGCTGCCGCGTCACCTCGAGATCATCGAGAAGATCAACGCGCAGTTCGAGGCCGAGCTCAAGGCCAA GGGCGTTGCCGCCGACACCATCAAGGACATGGCCATCTACACTGGCGACGCCGTGCGCATGGCCTACCTGGCCACCTACG GCGGCTCCCACGTCAACGGCGTGGCCGAGCTGCACTCCCAGCTGCTGAAGGACGTCACCCTCAAGAACTTCTCCGACGTC TACCCGGACAAGTTCACCAACGTGACCAACGGCGTGACCCCGCGTCGCTTCGTCAAGCTCGCCAACCCGCGCCTGTCCGA CCTCATCACCGAGGGCCTGGGCACCGACAAGTGGGTCGCCGATCTGGAACTGCTCAAGGGTCTCGAGCCGCTGGCCAAGG ACGATGAATTCGTCAAGAAGTTCGCCGCCGTCAAGAAGGCCAACAAGCACGCATTCGTGGGCTTCGCCAAGGACCACTAC GGCATCGATATCGACGAGAACACCCTGTTCAACACCATGGTCAAGCGTCTGCACGAGTACAAGCGCCAGTCTCTGAAGAT TCTCGCCGTGATCTCCAACTACGCCGACATCAAGTCCGGCAAGGTCAAGGCCGAGGACATCACTCCGCGCACCGTGTTCT TCGGTGCCAAGGCCGCTCCGGGCTACTACCTGGCCAAGATGACCATCGAGCTGATCAACAACGTTTCCCGCGTGATCAGC AGCGATCCGGCCGTCAAGGGCAAGCTCGCCGTCCACATGCTGCCGAACTACAACGTCGAGATGGCTCAGAACCTCATCCC GGCCACCGAGCTTGACGAGCAGATCTCCCAGGCCGGCAAGGAAGCTTCCGGTACCGGCAACATGAAGTTCGCTCTGAACG GCGCCCTGACCGTGGGTACGCTGGACGGCGCGAACGTCGAGATCCGTGAGCGCGTCGGCGCCGAGAACTTCTTCCTGTTC GGCATGACCGTCGACGAAGTCGAGAAGAAGTACGCCGAGGGCTACGATCCCGCCTCCTACTACGAGGCCGATCCGCGCCT GAAGCAGGCCATCGATCTGGTGGCCGACGGCACCTTCTCCAACGGCGACCGCAACGCCTACTCCCCGCTCGTGGCCGACT GGCTGACCAAGGACTGGTTCATGACCCTGGCCGACTTCTCCGCCTACATGGGCATCCAGTCTGAGATCGAGGCCCTCTAC GCCGATGAGCTCGAATGGAACCGCAAGGCCCTGCTCAACGTGGCCAACTCCGGCTACTTCAGCTCCGACCGCTCCATGGA AGACTATTTGGAACGTATCTGGCACACTGCTCCTCTGGCCGACTGA
Upstream 100 bases:
>100_bases ACGATGGCATACGGTGTGATGCGGAACTGTGAGACATGTGATACGCTTCTCGATGAGAACGTATGCAAGAGCGCTCCGCC ATCGTCGTTACGGAGAGTTC
Downstream 100 bases:
>100_bases GTCGGTGGGGCGGTTCCCCTCGGAGAGGGGAACCAGAACATAAGAAGCCCCGCAACCGACATCCATCGGTTGCGGGGCTT CTTGCGTTGAAAGACCGCCC
Product: glycogen/starch/alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 841; Mature: 841
Protein sequence:
>841_residues MLTFVRRYLSRGIIITGTYPGRKVRMTEITAPKSPVTAEQFADEIREQLKYTQNVTAEQATPADVYVAASKAVRNHLADS WFKTQADTVNGNTKAVGYLSAEFLMGKQLENALLNAGLTDQFDKAVEALGFKPKDIVDAEYEPGLGNGGLGRLAACFIDS LASLGVPAFGYGIQYKYGIFKQKFDENGKQVETPDYWLANEEPWGHTDYNRDQKVSFGGKVVENADGTKTWQPAWSVRAV PVDYLVPGYKSGRVNTLRLWTAKSYDEFDLLAFNRSEYMDAVAPQVKAENISKILYPEDSTKVGKELRLEQQYFFVSASL HDAIRVFYPGQDKPDLTTFPNKIVFQLNDTHPVIGIPELMRILIDEYGYDWDTAWSITTKTFNYTCHTLLPEALEVWPAS LIGELLPRHLEIIEKINAQFEAELKAKGVAADTIKDMAIYTGDAVRMAYLATYGGSHVNGVAELHSQLLKDVTLKNFSDV YPDKFTNVTNGVTPRRFVKLANPRLSDLITEGLGTDKWVADLELLKGLEPLAKDDEFVKKFAAVKKANKHAFVGFAKDHY GIDIDENTLFNTMVKRLHEYKRQSLKILAVISNYADIKSGKVKAEDITPRTVFFGAKAAPGYYLAKMTIELINNVSRVIS SDPAVKGKLAVHMLPNYNVEMAQNLIPATELDEQISQAGKEASGTGNMKFALNGALTVGTLDGANVEIRERVGAENFFLF GMTVDEVEKKYAEGYDPASYYEADPRLKQAIDLVADGTFSNGDRNAYSPLVADWLTKDWFMTLADFSAYMGIQSEIEALY ADELEWNRKALLNVANSGYFSSDRSMEDYLERIWHTAPLAD
Sequences:
>Translated_841_residues MLTFVRRYLSRGIIITGTYPGRKVRMTEITAPKSPVTAEQFADEIREQLKYTQNVTAEQATPADVYVAASKAVRNHLADS WFKTQADTVNGNTKAVGYLSAEFLMGKQLENALLNAGLTDQFDKAVEALGFKPKDIVDAEYEPGLGNGGLGRLAACFIDS LASLGVPAFGYGIQYKYGIFKQKFDENGKQVETPDYWLANEEPWGHTDYNRDQKVSFGGKVVENADGTKTWQPAWSVRAV PVDYLVPGYKSGRVNTLRLWTAKSYDEFDLLAFNRSEYMDAVAPQVKAENISKILYPEDSTKVGKELRLEQQYFFVSASL HDAIRVFYPGQDKPDLTTFPNKIVFQLNDTHPVIGIPELMRILIDEYGYDWDTAWSITTKTFNYTCHTLLPEALEVWPAS LIGELLPRHLEIIEKINAQFEAELKAKGVAADTIKDMAIYTGDAVRMAYLATYGGSHVNGVAELHSQLLKDVTLKNFSDV YPDKFTNVTNGVTPRRFVKLANPRLSDLITEGLGTDKWVADLELLKGLEPLAKDDEFVKKFAAVKKANKHAFVGFAKDHY GIDIDENTLFNTMVKRLHEYKRQSLKILAVISNYADIKSGKVKAEDITPRTVFFGAKAAPGYYLAKMTIELINNVSRVIS SDPAVKGKLAVHMLPNYNVEMAQNLIPATELDEQISQAGKEASGTGNMKFALNGALTVGTLDGANVEIRERVGAENFFLF GMTVDEVEKKYAEGYDPASYYEADPRLKQAIDLVADGTFSNGDRNAYSPLVADWLTKDWFMTLADFSAYMGIQSEIEALY ADELEWNRKALLNVANSGYFSSDRSMEDYLERIWHTAPLAD >Mature_841_residues MLTFVRRYLSRGIIITGTYPGRKVRMTEITAPKSPVTAEQFADEIREQLKYTQNVTAEQATPADVYVAASKAVRNHLADS WFKTQADTVNGNTKAVGYLSAEFLMGKQLENALLNAGLTDQFDKAVEALGFKPKDIVDAEYEPGLGNGGLGRLAACFIDS LASLGVPAFGYGIQYKYGIFKQKFDENGKQVETPDYWLANEEPWGHTDYNRDQKVSFGGKVVENADGTKTWQPAWSVRAV PVDYLVPGYKSGRVNTLRLWTAKSYDEFDLLAFNRSEYMDAVAPQVKAENISKILYPEDSTKVGKELRLEQQYFFVSASL HDAIRVFYPGQDKPDLTTFPNKIVFQLNDTHPVIGIPELMRILIDEYGYDWDTAWSITTKTFNYTCHTLLPEALEVWPAS LIGELLPRHLEIIEKINAQFEAELKAKGVAADTIKDMAIYTGDAVRMAYLATYGGSHVNGVAELHSQLLKDVTLKNFSDV YPDKFTNVTNGVTPRRFVKLANPRLSDLITEGLGTDKWVADLELLKGLEPLAKDDEFVKKFAAVKKANKHAFVGFAKDHY GIDIDENTLFNTMVKRLHEYKRQSLKILAVISNYADIKSGKVKAEDITPRTVFFGAKAAPGYYLAKMTIELINNVSRVIS SDPAVKGKLAVHMLPNYNVEMAQNLIPATELDEQISQAGKEASGTGNMKFALNGALTVGTLDGANVEIRERVGAENFFLF GMTVDEVEKKYAEGYDPASYYEADPRLKQAIDLVADGTFSNGDRNAYSPLVADWLTKDWFMTLADFSAYMGIQSEIEALY ADELEWNRKALLNVANSGYFSSDRSMEDYLERIWHTAPLAD
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=789, Percent_Identity=46.7680608365019, Blast_Score=672, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=791, Percent_Identity=46.1441213653603, Blast_Score=657, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=789, Percent_Identity=45.3738910012674, Blast_Score=657, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=791, Percent_Identity=44.3742098609355, Blast_Score=610, Evalue=1e-174, Organism=Homo sapiens, GI257900462, Length=661, Percent_Identity=45.0832072617247, Blast_Score=565, Evalue=1e-161, Organism=Escherichia coli, GI2367228, Length=773, Percent_Identity=44.7606727037516, Blast_Score=657, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=801, Percent_Identity=43.6953807740325, Blast_Score=652, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=788, Percent_Identity=46.3197969543147, Blast_Score=674, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=788, Percent_Identity=46.3197969543147, Blast_Score=673, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=846, Percent_Identity=42.9078014184397, Blast_Score=612, Evalue=1e-176, Organism=Drosophila melanogaster, GI78706832, Length=801, Percent_Identity=45.1935081148564, Blast_Score=659, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=801, Percent_Identity=45.1935081148564, Blast_Score=659, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 93928; Mature: 93928
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTFVRRYLSRGIIITGTYPGRKVRMTEITAPKSPVTAEQFADEIREQLKYTQNVTAEQA CHHHHHHHHHCCEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC TPADVYVAASKAVRNHLADSWFKTQADTVNGNTKAVGYLSAEFLMGKQLENALLNAGLTD CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCH QFDKAVEALGFKPKDIVDAEYEPGLGNGGLGRLAACFIDSLASLGVPAFGYGIQYKYGIF HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHH KQKFDENGKQVETPDYWLANEEPWGHTDYNRDQKVSFGGKVVENADGTKTWQPAWSVRAV HHHHCCCCCEECCCCCEECCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCEEEC PVDYLVPGYKSGRVNTLRLWTAKSYDEFDLLAFNRSEYMDAVAPQVKAENISKILYPEDS CHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECHHHHHHHHCCHHHHCCCCEEECCCCC TKVGKELRLEQQYFFVSASLHDAIRVFYPGQDKPDLTTFPNKIVFQLNDTHPVIGIPELM HHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHH RILIDEYGYDWDTAWSITTKTFNYTCHTLLPEALEVWPASLIGELLPRHLEIIEKINAQF HHHHHHHCCCCCCEEEEEEEEECEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHH EAELKAKGVAADTIKDMAIYTGDAVRMAYLATYGGSHVNGVAELHSQLLKDVTLKNFSDV HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC YPDKFTNVTNGVTPRRFVKLANPRLSDLITEGLGTDKWVADLELLKGLEPLAKDDEFVKK CCCHHCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHH FAAVKKANKHAFVGFAKDHYGIDIDENTLFNTMVKRLHEYKRQSLKILAVISNYADIKSG HHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEHHHHHHCCCC KVKAEDITPRTVFFGAKAAPGYYLAKMTIELINNVSRVISSDPAVKGKLAVHMLPNYNVE CEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHH MAQNLIPATELDEQISQAGKEASGTGNMKFALNGALTVGTLDGANVEIRERVGAENFFLF HHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECEEEEEECCCCCCHHHHHCCCCCEEEE GMTVDEVEKKYAEGYDPASYYEADPRLKQAIDLVADGTFSNGDRNAYSPLVADWLTKDWF ECCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH MTLADFSAYMGIQSEIEALYADELEWNRKALLNVANSGYFSSDRSMEDYLERIWHTAPLA HHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC D C >Mature Secondary Structure MLTFVRRYLSRGIIITGTYPGRKVRMTEITAPKSPVTAEQFADEIREQLKYTQNVTAEQA CHHHHHHHHHCCEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC TPADVYVAASKAVRNHLADSWFKTQADTVNGNTKAVGYLSAEFLMGKQLENALLNAGLTD CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCH QFDKAVEALGFKPKDIVDAEYEPGLGNGGLGRLAACFIDSLASLGVPAFGYGIQYKYGIF HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHH KQKFDENGKQVETPDYWLANEEPWGHTDYNRDQKVSFGGKVVENADGTKTWQPAWSVRAV HHHHCCCCCEECCCCCEECCCCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCEEEC PVDYLVPGYKSGRVNTLRLWTAKSYDEFDLLAFNRSEYMDAVAPQVKAENISKILYPEDS CHHHCCCCCCCCCEEEEEEEECCCCCCEEEEEECHHHHHHHHCCHHHHCCCCEEECCCCC TKVGKELRLEQQYFFVSASLHDAIRVFYPGQDKPDLTTFPNKIVFQLNDTHPVIGIPELM HHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHH RILIDEYGYDWDTAWSITTKTFNYTCHTLLPEALEVWPASLIGELLPRHLEIIEKINAQF HHHHHHHCCCCCCEEEEEEEEECEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHH EAELKAKGVAADTIKDMAIYTGDAVRMAYLATYGGSHVNGVAELHSQLLKDVTLKNFSDV HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC YPDKFTNVTNGVTPRRFVKLANPRLSDLITEGLGTDKWVADLELLKGLEPLAKDDEFVKK CCCHHCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHH FAAVKKANKHAFVGFAKDHYGIDIDENTLFNTMVKRLHEYKRQSLKILAVISNYADIKSG HHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEHHHHHHCCCC KVKAEDITPRTVFFGAKAAPGYYLAKMTIELINNVSRVISSDPAVKGKLAVHMLPNYNVE CEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHH MAQNLIPATELDEQISQAGKEASGTGNMKFALNGALTVGTLDGANVEIRERVGAENFFLF HHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECEEEEEECCCCCCHHHHHCCCCCEEEE GMTVDEVEKKYAEGYDPASYYEADPRLKQAIDLVADGTFSNGDRNAYSPLVADWLTKDWF ECCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH MTLADFSAYMGIQSEIEALYADELEWNRKALLNVANSGYFSSDRSMEDYLERIWHTAPLA HHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]