| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213690937
Identifier: 213690937
GI number: 213690937
Start: 11576
End: 12997
Strand: Direct
Name: 213690937
Synonym: Blon_0009
Alternate gene names: NA
Gene position: 11576-12997 (Clockwise)
Preceding gene: 213690936
Following gene: 213690943
Centisome position: 0.41
GC content: 49.16
Gene sequence:
>1422_bases ATGTTTGTCGCACGAGAGCACGAGTTACAAGTGCTGGAAAAGCTGTTTACCAGTGATTCATTCGAAATGGTGGTGCTGTA CGGTAGGCGGCGTGTAGGGAAAACGGCGTTGATCGACGAATTTGTCAAAGATAAACGCGTGCTGTACTTCACGGCCATAC AGCAAAGCGCCAAGATGAATCTTGAAGATTTCTCAAGAGCGGCATTGTCGTTCTTTGGTATGCCGGATTCCACCCCGTCG TTTGGCAGGTGGTCTGATGCGTTATCGTTTGTTGCTGAACGTGCTGCACAGACTGACGAACGTATGGTGTTCGTATTCGA TGAGTTCCCTTATGCGGCTGCCGCCGAGCCAGCATTACCCTCCATGTTGCAGATAGCAGTTGACCATGGATTCCTCGCCA CAAAAGTGACGATGATTCTATCCGGTAGTAACGAGGGATTCATGGAAAACGACGTATTGGGGCGTAAAAGCCCGCTATAC GGGCGTCGTACAGCACAGATTCGACTCCTGCCATTCGATTATGCGGATGCGGCAAAATTTCTAACGAACACATCTCCGCA AGAACTGGTCCAATACTATGCGACTTTCGGCGGTACGCCATATTATCTGGCTCGTATACAGGAAGCCGATGGCTTTGAAT CCAATGTGCTGCGCTTGATGTTCGACAACTTGGGCGTACTGCGTGAGGAACCTATGATGCTGTTGCGTCAGGAGCTTCGT GAACCGGCATCGTATTATTCGATATTGCAATCTATTGCGGGTGGTAATTCCTCGCCAAAGCTTATCGCTGAACATGCGGG TGTCGAATCTGATTCGATTGGAGCATATCTGAAAACGCTGGTCGATTTGCGCTTAATTGAGCGAAAAGTGCCGTTTGGTG AAGATCCGAGTAAATCGCGCAAGGGAATGTATGTGGTGAGCGATCCCTTCTTTGCATATTGGTTCCGCTTTGTGGGGCGC AACATGAGCATTTTGGATGGTAATATCAGCGAGGAGGTTACGAGCAGACTCGCTTTTGGACCATCGTTTGATACCTATGT TGGGCAACAATTTGAGACGATTTGCCTGCAATGGCTTATTCGAAACAACGCTATGGGCAACCTCCCCTTTGTTGCCACTC AATTCGGCAAATGGTGGGGCAATGATCCGATTGCTCACGAGCAAACCGATATCGATGTGATTGCTGCGGATTCGCTCGAT AAAACGATTCTGTTCGGTGAATGCAAATGGCGTAATTCATTCAACGAAACGGAGGCTATTGAAAGGCTCCATCAGCGTGC TGGCTTAGTCCGCGGCTATCAGGCAGGTAATGCGTGGCTTATGCTGTTCACCAAGAATCCGGTGAGTGAGTCCACGCGAA CCCGCTACATGGATGATGAACGAATGGTATTCGTTTCTGCGGAAGAGTTATACACTGCGTGA
Upstream 100 bases:
>100_bases GCGGTAGGGCAACAATTATTAGTATCGTAATTAAGGTAATCGTGATTACATTAACCATGATACTCTTATTATTGGGCGGT AGACGGATCGGAGGGCTGCA
Downstream 100 bases:
>100_bases TGCATTACTGGGTGATTGTGACGCGGGATATCCAGAGTCCTGCCGACAGCCACGTGGCAATTACGCCAACTCACGCACCA CCAAATCGGTGTTCAGGTGC
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MFVAREHELQVLEKLFTSDSFEMVVLYGRRRVGKTALIDEFVKDKRVLYFTAIQQSAKMNLEDFSRAALSFFGMPDSTPS FGRWSDALSFVAERAAQTDERMVFVFDEFPYAAAAEPALPSMLQIAVDHGFLATKVTMILSGSNEGFMENDVLGRKSPLY GRRTAQIRLLPFDYADAAKFLTNTSPQELVQYYATFGGTPYYLARIQEADGFESNVLRLMFDNLGVLREEPMMLLRQELR EPASYYSILQSIAGGNSSPKLIAEHAGVESDSIGAYLKTLVDLRLIERKVPFGEDPSKSRKGMYVVSDPFFAYWFRFVGR NMSILDGNISEEVTSRLAFGPSFDTYVGQQFETICLQWLIRNNAMGNLPFVATQFGKWWGNDPIAHEQTDIDVIAADSLD KTILFGECKWRNSFNETEAIERLHQRAGLVRGYQAGNAWLMLFTKNPVSESTRTRYMDDERMVFVSAEELYTA
Sequences:
>Translated_473_residues MFVAREHELQVLEKLFTSDSFEMVVLYGRRRVGKTALIDEFVKDKRVLYFTAIQQSAKMNLEDFSRAALSFFGMPDSTPS FGRWSDALSFVAERAAQTDERMVFVFDEFPYAAAAEPALPSMLQIAVDHGFLATKVTMILSGSNEGFMENDVLGRKSPLY GRRTAQIRLLPFDYADAAKFLTNTSPQELVQYYATFGGTPYYLARIQEADGFESNVLRLMFDNLGVLREEPMMLLRQELR EPASYYSILQSIAGGNSSPKLIAEHAGVESDSIGAYLKTLVDLRLIERKVPFGEDPSKSRKGMYVVSDPFFAYWFRFVGR NMSILDGNISEEVTSRLAFGPSFDTYVGQQFETICLQWLIRNNAMGNLPFVATQFGKWWGNDPIAHEQTDIDVIAADSLD KTILFGECKWRNSFNETEAIERLHQRAGLVRGYQAGNAWLMLFTKNPVSESTRTRYMDDERMVFVSAEELYTA >Mature_473_residues MFVAREHELQVLEKLFTSDSFEMVVLYGRRRVGKTALIDEFVKDKRVLYFTAIQQSAKMNLEDFSRAALSFFGMPDSTPS FGRWSDALSFVAERAAQTDERMVFVFDEFPYAAAAEPALPSMLQIAVDHGFLATKVTMILSGSNEGFMENDVLGRKSPLY GRRTAQIRLLPFDYADAAKFLTNTSPQELVQYYATFGGTPYYLARIQEADGFESNVLRLMFDNLGVLREEPMMLLRQELR EPASYYSILQSIAGGNSSPKLIAEHAGVESDSIGAYLKTLVDLRLIERKVPFGEDPSKSRKGMYVVSDPFFAYWFRFVGR NMSILDGNISEEVTSRLAFGPSFDTYVGQQFETICLQWLIRNNAMGNLPFVATQFGKWWGNDPIAHEQTDIDVIAADSLD KTILFGECKWRNSFNETEAIERLHQRAGLVRGYQAGNAWLMLFTKNPVSESTRTRYMDDERMVFVSAEELYTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011579 - InterPro: IPR004256 - InterPro: IPR011335 - InterPro: IPR011991 [H]
Pfam domain/function: PF01637 Arch_ATPase; PF03008 DUF234 [H]
EC number: NA
Molecular weight: Translated: 53694; Mature: 53694
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVAREHELQVLEKLFTSDSFEMVVLYGRRRVGKTALIDEFVKDKRVLYFTAIQQSAKMN CCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEHHHHHCCC LEDFSRAALSFFGMPDSTPSFGRWSDALSFVAERAAQTDERMVFVFDEFPYAAAAEPALP HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCH SMLQIAVDHGFLATKVTMILSGSNEGFMENDVLGRKSPLYGRRTAQIRLLPFDYADAAKF HHHHHHHHCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHH LTNTSPQELVQYYATFGGTPYYLARIQEADGFESNVLRLMFDNLGVLREEPMMLLRQELR HCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHH EPASYYSILQSIAGGNSSPKLIAEHAGVESDSIGAYLKTLVDLRLIERKVPFGEDPSKSR CHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KGMYVVSDPFFAYWFRFVGRNMSILDGNISEEVTSRLAFGPSFDTYVGQQFETICLQWLI CCEEEECCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RNNAMGNLPFVATQFGKWWGNDPIAHEQTDIDVIAADSLDKTILFGECKWRNSFNETEAI HCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHH ERLHQRAGLVRGYQAGNAWLMLFTKNPVSESTRTRYMDDERMVFVSAEELYTA HHHHHHHCHHCCEECCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEHHHHHCC >Mature Secondary Structure MFVAREHELQVLEKLFTSDSFEMVVLYGRRRVGKTALIDEFVKDKRVLYFTAIQQSAKMN CCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEHHHHHCCC LEDFSRAALSFFGMPDSTPSFGRWSDALSFVAERAAQTDERMVFVFDEFPYAAAAEPALP HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCH SMLQIAVDHGFLATKVTMILSGSNEGFMENDVLGRKSPLYGRRTAQIRLLPFDYADAAKF HHHHHHHHCCHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHH LTNTSPQELVQYYATFGGTPYYLARIQEADGFESNVLRLMFDNLGVLREEPMMLLRQELR HCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHH EPASYYSILQSIAGGNSSPKLIAEHAGVESDSIGAYLKTLVDLRLIERKVPFGEDPSKSR CHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KGMYVVSDPFFAYWFRFVGRNMSILDGNISEEVTSRLAFGPSFDTYVGQQFETICLQWLI CCEEEECCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RNNAMGNLPFVATQFGKWWGNDPIAHEQTDIDVIAADSLDKTILFGECKWRNSFNETEAI HCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHH ERLHQRAGLVRGYQAGNAWLMLFTKNPVSESTRTRYMDDERMVFVSAEELYTA HHHHHHHCHHCCEECCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]