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The map label for this gene is ydjR [C]

Identifier: 213159150

GI number: 213159150

Start: 3986163

End: 3986738

Strand: Reverse

Name: ydjR [C]

Synonym: AB57_3861

Alternate gene names: 213159150

Gene position: 3986738-3986163 (Counterclockwise)

Preceding gene: 213159151

Following gene: 213159149

Centisome position: 98.43

GC content: 40.62

Gene sequence:

>576_bases
ATGATTGAATTGATCAGGGCCGATCAATATACAAAAATGCTTTGGAAAAATGGTGCAGGCTTTACTTTAGAAATTGCTCG
AAGCCAAGGTGAAGCCGACTTTGAGTGGCGCATTTCGATGGCAGATGTAACAACTTCTGGGCCATTTTCGTTATTTCCCA
ATAAGCAACGCATTATTAGCGTACTCGATGGGCAGGGCATGGTACTGCATGTCGATAACCTTCCTGCCAAAAAGCTGAAA
CAGGGCGATATTTTTGCTTTTCATGGTGAAAGTCAGGTCCAAAGTGAACTGGTAGACGGTGCAATTCGGGATTTAAATTT
AATTTATGATCCTGCAAAGTTTCATGCCCGTTTTCAGTGGTTGAATGAGGCAGCGGAGCAGGCATTTATAAGCTCGGCAG
ACCTGATTTTTATTTTTAATCAGGGTGGTGAAACGGAAGTGAACGTTGATGATGATTTTGTTCAGCTTGCTGCTCATGAG
ACGCTAAAAATTGAGAAAAATGCTAGTGTCACATCAATCAATTTTCCAAAAAAACAGCTCAAAAGTTGCTATATCATTGA
GCTAATTCAACGATAA

Upstream 100 bases:

>100_bases
TACTCATCCGGCGTCGCACATGGTCAAACAAACAACTCATTTCAAGTGCACGATTGATTTATCCGGGCAGTCGCTATTAT
CTCGAAGGGAAATTTAATCC

Downstream 100 bases:

>100_bases
AACAATATAATTTACTACTTAAAAAGACACGTGTCGATATTAAAGATATGTGCTTTTTTTATTGCCAGATATAAAAATAA
ATTAATTTAATTCATAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MIELIRADQYTKMLWKNGAGFTLEIARSQGEADFEWRISMADVTTSGPFSLFPNKQRIISVLDGQGMVLHVDNLPAKKLK
QGDIFAFHGESQVQSELVDGAIRDLNLIYDPAKFHARFQWLNEAAEQAFISSADLIFIFNQGGETEVNVDDDFVQLAAHE
TLKIEKNASVTSINFPKKQLKSCYIIELIQR

Sequences:

>Translated_191_residues
MIELIRADQYTKMLWKNGAGFTLEIARSQGEADFEWRISMADVTTSGPFSLFPNKQRIISVLDGQGMVLHVDNLPAKKLK
QGDIFAFHGESQVQSELVDGAIRDLNLIYDPAKFHARFQWLNEAAEQAFISSADLIFIFNQGGETEVNVDDDFVQLAAHE
TLKIEKNASVTSINFPKKQLKSCYIIELIQR
>Mature_191_residues
MIELIRADQYTKMLWKNGAGFTLEIARSQGEADFEWRISMADVTTSGPFSLFPNKQRIISVLDGQGMVLHVDNLPAKKLK
QGDIFAFHGESQVQSELVDGAIRDLNLIYDPAKFHARFQWLNEAAEQAFISSADLIFIFNQGGETEVNVDDDFVQLAAHE
TLKIEKNASVTSINFPKKQLKSCYIIELIQR

Specific function: Unknown

COG id: COG3758

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydjR [H]

Homologues:

Organism=Escherichia coli, GI87081963, Length=158, Percent_Identity=31.0126582278481, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR010282 [H]

Pfam domain/function: PF05962 HutD [H]

EC number: NA

Molecular weight: Translated: 21568; Mature: 21568

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELIRADQYTKMLWKNGAGFTLEIARSQGEADFEWRISMADVTTSGPFSLFPNKQRIIS
CEEEEECCHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCEECCCHHHEEE
VLDGQGMVLHVDNLPAKKLKQGDIFAFHGESQVQSELVDGAIRDLNLIYDPAKFHARFQW
EECCCEEEEEECCCCHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHH
LNEAAEQAFISSADLIFIFNQGGETEVNVDDDFVQLAAHETLKIEKNASVTSINFPKKQL
HHHHHHHHHCCCCCEEEEECCCCCEEECCCHHHHHHHHCCEEEEECCCCEEEECCCHHHH
KSCYIIELIQR
HHHHHHHHHCC
>Mature Secondary Structure
MIELIRADQYTKMLWKNGAGFTLEIARSQGEADFEWRISMADVTTSGPFSLFPNKQRIIS
CEEEEECCHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCEECCCHHHEEE
VLDGQGMVLHVDNLPAKKLKQGDIFAFHGESQVQSELVDGAIRDLNLIYDPAKFHARFQW
EECCCEEEEEECCCCHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHH
LNEAAEQAFISSADLIFIFNQGGETEVNVDDDFVQLAAHETLKIEKNASVTSINFPKKQL
HHHHHHHHHCCCCCEEEEECCCCCEEECCCHHHHHHHHCCEEEEECCCCEEEECCCHHHH
KSCYIIELIQR
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2203753 [H]